RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 JPH4Q96JJ6 628 aa30.68■■■□□ 2.5
PBX3-205ENST00000373492 KIAA0586Q9BVV6 1533 aa30.67■■■□□ 2.5
PBX3-205ENST00000373492 RAPGEF2Q9Y4G8 1499 aa30.63■■■□□ 2.49
PBX3-205ENST00000373492 EEA1Q15075 1411 aa30.62■■■□□ 2.49
PBX3-205ENST00000373492 ERCC6L2Q5T890 1561 aa30.61■■■□□ 2.49
PBX3-205ENST00000373492 PRG4Q92954 1404 aaPredicted RBP30.6■■■□□ 2.49
PBX3-205ENST00000373492 PRXQ9BXM0 1461 aa30.5■■■□□ 2.47
PBX3-205ENST00000373492 CSRNP3Q8WYN3 585 aa30.47■■■□□ 2.47
PBX3-205ENST00000373492 IQGAP2Q13576 1575 aa30.43■■■□□ 2.46
PBX3-205ENST00000373492 FAM9AQ8IZU1 332 aaPredicted RBP30.43■■■□□ 2.46
PBX3-205ENST00000373492 CTTNBP2Q8WZ74 1663 aa30.41■■■□□ 2.46
PBX3-205ENST00000373492 CARMIL2Q6F5E8 1435 aa30.35■■■□□ 2.45
PBX3-205ENST00000373492 KIF21BO75037 1637 aa30.33■■■□□ 2.45
PBX3-205ENST00000373492 UGGT2Q9NYU1 1516 aa30.29■■■□□ 2.44
PBX3-205ENST00000373492 TNIKQ9UKE5 1360 aa30.27■■■□□ 2.44
PBX3-205ENST00000373492 PTPRGP23470 1445 aa30.24■■■□□ 2.43
PBX3-205ENST00000373492 DISP1Q96F81 1524 aa30.24■■■□□ 2.43
PBX3-205ENST00000373492 TRHP20396 242 aaPredicted RBP30.2■■■□□ 2.43
PBX3-205ENST00000373492 GOLGA3Q08378 1498 aa30.14■■■□□ 2.42
PBX3-205ENST00000373492 KIAA0556O60303 1618 aa30.14■■■□□ 2.41
PBX3-205ENST00000373492 NPM1P06748 294 aaKnown RBP eCLIP30.12■■■□□ 2.41
PBX3-205ENST00000373492 TTBK1Q5TCY1 1321 aaPredicted RBP30.11■■■□□ 2.41
PBX3-205ENST00000373492 ADCY10Q96PN6 1610 aa30.11■■■□□ 2.41
PBX3-205ENST00000373492 UACAQ9BZF9 1416 aa30.04■■■□□ 2.4
PBX3-205ENST00000373492 UHRF1BP1LA0JNW5 1464 aa30.02■■■□□ 2.4
PBX3-205ENST00000373492 EHMT2Q96KQ7 1210 aa30.01■■■□□ 2.39
PBX3-205ENST00000373492 UBTFP17480 764 aaKnown RBP29.99■■■□□ 2.39
PBX3-205ENST00000373492 MAPKBP1O60336 1514 aa29.98■■■□□ 2.39
PBX3-205ENST00000373492 ABCC2Q92887 1545 aa29.97■■■□□ 2.39
PBX3-205ENST00000373492 SAMD9Q5K651 1589 aa29.91■■■□□ 2.38
PBX3-205ENST00000373492 P3H3Q8IVL6 736 aa29.88■■■□□ 2.37
PBX3-205ENST00000373492 ABCC10Q5T3U5 1492 aa29.87■■■□□ 2.37
PBX3-205ENST00000373492 PLB1Q6P1J6 1458 aa29.87■■■□□ 2.37
PBX3-205ENST00000373492 KDM5BQ9UGL1 1544 aa29.86■■■□□ 2.37
PBX3-205ENST00000373492 ABCA8O94911 1581 aa29.84■■■□□ 2.37
PBX3-205ENST00000373492 RANGAP1P46060 587 aaPredicted RBP29.83■■■□□ 2.37
PBX3-205ENST00000373492 FAM69CQ0P6D2 419 aa29.82■■■□□ 2.36
PBX3-205ENST00000373492 EFCAB5A4FU69 1503 aa29.81■■■□□ 2.36
PBX3-205ENST00000373492 KIF13AQ9H1H9 1805 aa29.79■■■□□ 2.36
PBX3-205ENST00000373492 ASXL2Q76L83 1435 aa29.78■■■□□ 2.36
PBX3-205ENST00000373492 DIP2BQ9P265 1576 aa29.77■■■□□ 2.36
PBX3-205ENST00000373492 ZCCHC11Q5TAX3 1644 aaKnown RBP29.74■■■□□ 2.35
PBX3-205ENST00000373492 FHOD3Q2V2M9 1422 aa29.73■■■□□ 2.35
PBX3-205ENST00000373492 RAPGEF6Q8TEU7 1601 aa29.64■■■□□ 2.34
PBX3-205ENST00000373492 GLI2P10070 1586 aa29.64■■■□□ 2.33
PBX3-205ENST00000373492 ARHGAP35Q9NRY4 1499 aa29.62■■■□□ 2.33
PBX3-205ENST00000373492 WDR7Q9Y4E6 1490 aa29.61■■■□□ 2.33
PBX3-205ENST00000373492 EPRSP07814 1512 aaKnown RBP29.61■■■□□ 2.33
PBX3-205ENST00000373492 ATP10BO94823 1461 aa29.61■■■□□ 2.33
PBX3-205ENST00000373492 LOC105371045A0A1W2PR82 267 aa29.6■■■□□ 2.33
PBX3-205ENST00000373492 NUP153P49790 1475 aaKnown RBP29.55■■■□□ 2.32
PBX3-205ENST00000373492 CLIP1P30622 1438 aa29.55■■■□□ 2.32
PBX3-205ENST00000373492 ARID3CA6NKF2 412 aa29.55■■■□□ 2.32
PBX3-205ENST00000373492 FMN1Q68DA7 1419 aa29.54■■■□□ 2.32
PBX3-205ENST00000373492 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
PBX3-205ENST00000373492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.48■■■□□ 2.31
PBX3-205ENST00000373492 HNRNPUL2Q1KMD3 747 aaKnown RBP29.48■■■□□ 2.31
PBX3-205ENST00000373492 KCNH8Q96L42 1107 aa29.48■■■□□ 2.31
PBX3-205ENST00000373492 TSPOAP1O95153 1857 aa29.46■■■□□ 2.31
PBX3-205ENST00000373492 MAP3K4Q9Y6R4 1608 aa29.45■■■□□ 2.3
PBX3-205ENST00000373492 HECW1Q76N89 1606 aa29.4■■■□□ 2.3
PBX3-205ENST00000373492 PPRC1Q5VV67 1664 aaKnown RBP29.39■■■□□ 2.3
PBX3-205ENST00000373492 TEX14Q8IWB6 1497 aa29.38■■■□□ 2.29
PBX3-205ENST00000373492 PLEKHD1A6NEE1 506 aa29.38■■■□□ 2.29
PBX3-205ENST00000373492 CD109Q6YHK3 1445 aa29.37■■■□□ 2.29
PBX3-205ENST00000373492 CFAP43Q8NDM7 1665 aa29.35■■■□□ 2.29
PBX3-205ENST00000373492 ATP1B4Q9UN42 357 aaPredicted RBP29.34■■■□□ 2.29
PBX3-205ENST00000373492 MAGI3Q5TCQ9 1506 aa29.33■■■□□ 2.29
PBX3-205ENST00000373492 PCF11O94913 1555 aaKnown RBP29.33■■■□□ 2.29
PBX3-205ENST00000373492 KDM6BO15054 1643 aa29.32■■■□□ 2.28
PBX3-205ENST00000373492 LRRIQ1Q96JM4 1722 aa29.31■■■□□ 2.28
PBX3-205ENST00000373492 CDK13Q14004 1512 aaKnown RBP29.3■■■□□ 2.28
PBX3-205ENST00000373492 CASKIN1Q8WXD9 1431 aa29.28■■■□□ 2.28
PBX3-205ENST00000373492 ABCA9Q8IUA7 1624 aa29.28■■■□□ 2.28
PBX3-205ENST00000373492 CDK11AQ9UQ88 783 aaPredicted RBP29.26■■■□□ 2.27
PBX3-205ENST00000373492 FYCO1Q9BQS8 1478 aa29.25■■■□□ 2.27
PBX3-205ENST00000373492 CCDC18Q5T9S5 1454 aa29.18■■■□□ 2.26
PBX3-205ENST00000373492 COL17A1Q9UMD9 1497 aaPredicted RBP29.17■■■□□ 2.26
PBX3-205ENST00000373492 PHLDB1Q86UU1 1377 aa29.15■■■□□ 2.26
PBX3-205ENST00000373492 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.14■■■□□ 2.25
PBX3-205ENST00000373492 TROQ12816 1431 aaPredicted RBP29.12■■■□□ 2.25
PBX3-205ENST00000373492 VPS8Q8N3P4 1428 aa29.12■■■□□ 2.25
PBX3-205ENST00000373492 NEO1Q92859 1461 aa29.1■■■□□ 2.25
PBX3-205ENST00000373492 ARAP3Q8WWN8 1544 aa29.08■■■□□ 2.25
PBX3-205ENST00000373492 TTC37Q6PGP7 1564 aa29.06■■■□□ 2.24
PBX3-205ENST00000373492 KIF14Q15058 1648 aa29.03■■■□□ 2.24
PBX3-205ENST00000373492 PLCH2O75038 1416 aa29.01■■■□□ 2.23
PBX3-205ENST00000373492 FANCAO15360 1455 aa28.99■■■□□ 2.23
PBX3-205ENST00000373492 CFAP74Q9C0B2 1584 aa28.97■■■□□ 2.23
PBX3-205ENST00000373492 AKNAQ7Z591 1439 aa28.96■■■□□ 2.23
PBX3-205ENST00000373492 TIAM1Q13009 1591 aa28.93■■■□□ 2.22
PBX3-205ENST00000373492 MYO5CQ9NQX4 1742 aa28.93■■■□□ 2.22
PBX3-205ENST00000373492 EFCAB2Q5VUJ9 269 aa28.92■■■□□ 2.22
PBX3-205ENST00000373492 RAPGEF3O95398 923 aa28.9■■■□□ 2.22
PBX3-205ENST00000373492 DENND4BO75064 1496 aaPredicted RBP28.88■■■□□ 2.21
PBX3-205ENST00000373492 MAP3K1Q13233 1512 aa28.87■■■□□ 2.21
PBX3-205ENST00000373492 EHBP1L1Q8N3D4 1523 aa28.87■■■□□ 2.21
PBX3-205ENST00000373492 MTUS2Q5JR59 1369 aa28.87■■■□□ 2.21
PBX3-205ENST00000373492 APLP2Q06481 763 aa28.84■■■□□ 2.21
PBX3-205ENST00000373492 ADGRL1O94910 1474 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms