RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 RIMBP3Q9UFD9 1639 aa33.68■■■□□ 2.98
SYNC-201ENST00000373484 SHROOM2Q13796 1616 aa33.65■■■□□ 2.98
SYNC-201ENST00000373484 FAM9AQ8IZU1 332 aaPredicted RBP33.65■■■□□ 2.98
SYNC-201ENST00000373484 KIAA0586Q9BVV6 1533 aa33.63■■■□□ 2.97
SYNC-201ENST00000373484 CTTNBP2Q8WZ74 1663 aa33.55■■■□□ 2.96
SYNC-201ENST00000373484 KIF21BO75037 1637 aa33.54■■■□□ 2.96
SYNC-201ENST00000373484 IQGAP2Q13576 1575 aa33.51■■■□□ 2.96
SYNC-201ENST00000373484 JPH4Q96JJ6 628 aa33.49■■■□□ 2.95
SYNC-201ENST00000373484 ERCC6L2Q5T890 1561 aa33.47■■■□□ 2.95
SYNC-201ENST00000373484 ARAP1Q96P48 1450 aa33.43■■■□□ 2.94
SYNC-201ENST00000373484 PRG4Q92954 1404 aaPredicted RBP33.42■■■□□ 2.94
SYNC-201ENST00000373484 UGGT2Q9NYU1 1516 aa33.33■■■□□ 2.93
SYNC-201ENST00000373484 GOLGA3Q08378 1498 aa33.3■■■□□ 2.92
SYNC-201ENST00000373484 CYB5RLQ6IPT4 315 aa33.28■■■□□ 2.92
SYNC-201ENST00000373484 DISP1Q96F81 1524 aa33.24■■■□□ 2.91
SYNC-201ENST00000373484 CARMIL2Q6F5E8 1435 aa33.23■■■□□ 2.91
SYNC-201ENST00000373484 KIAA0556O60303 1618 aa33.2■■■□□ 2.9
SYNC-201ENST00000373484 EHMT2Q96KQ7 1210 aa33.17■■■□□ 2.9
SYNC-201ENST00000373484 UBTFP17480 764 aaKnown RBP33.13■■■□□ 2.89
SYNC-201ENST00000373484 TNIKQ9UKE5 1360 aa33.1■■■□□ 2.89
SYNC-201ENST00000373484 SAMD9Q5K651 1589 aa33.09■■■□□ 2.89
SYNC-201ENST00000373484 PTPRGP23470 1445 aa33.05■■■□□ 2.88
SYNC-201ENST00000373484 EFCAB5A4FU69 1503 aa32.97■■■□□ 2.87
SYNC-201ENST00000373484 TTBK1Q5TCY1 1321 aaPredicted RBP32.95■■■□□ 2.86
SYNC-201ENST00000373484 ADCY10Q96PN6 1610 aa32.94■■■□□ 2.86
SYNC-201ENST00000373484 RANGAP1P46060 587 aaPredicted RBP32.94■■■□□ 2.86
SYNC-201ENST00000373484 P3H3Q8IVL6 736 aa32.89■■■□□ 2.86
SYNC-201ENST00000373484 UACAQ9BZF9 1416 aa32.85■■■□□ 2.85
SYNC-201ENST00000373484 UHRF1BP1LA0JNW5 1464 aa32.84■■■□□ 2.85
SYNC-201ENST00000373484 FHOD3Q2V2M9 1422 aa32.84■■■□□ 2.85
SYNC-201ENST00000373484 ABCC2Q92887 1545 aa32.83■■■□□ 2.85
SYNC-201ENST00000373484 ARHGAP35Q9NRY4 1499 aa32.83■■■□□ 2.85
SYNC-201ENST00000373484 ABCA8O94911 1581 aa32.81■■■□□ 2.84
SYNC-201ENST00000373484 PLB1Q6P1J6 1458 aa32.8■■■□□ 2.84
SYNC-201ENST00000373484 LOC105371045A0A1W2PR82 267 aa32.76■■■□□ 2.83
SYNC-201ENST00000373484 RAPGEF6Q8TEU7 1601 aa32.71■■■□□ 2.83
SYNC-201ENST00000373484 NPM1P06748 294 aaKnown RBP eCLIP32.7■■■□□ 2.83
SYNC-201ENST00000373484 CLIP1P30622 1438 aa32.69■■■□□ 2.82
SYNC-201ENST00000373484 KDM5BQ9UGL1 1544 aa32.69■■■□□ 2.82
SYNC-201ENST00000373484 MAPKBP1O60336 1514 aa32.67■■■□□ 2.82
SYNC-201ENST00000373484 ZCCHC11Q5TAX3 1644 aaKnown RBP32.66■■■□□ 2.82
SYNC-201ENST00000373484 CEP162Q5TB80 1403 aa32.62■■■□□ 2.81
SYNC-201ENST00000373484 FMN1Q68DA7 1419 aa32.62■■■□□ 2.81
SYNC-201ENST00000373484 NUP153P49790 1475 aaKnown RBP32.55■■■□□ 2.8
SYNC-201ENST00000373484 KIF13AQ9H1H9 1805 aa32.51■■■□□ 2.8
SYNC-201ENST00000373484 ASXL2Q76L83 1435 aa32.5■■■□□ 2.79
SYNC-201ENST00000373484 ATP10BO94823 1461 aa32.5■■■□□ 2.79
SYNC-201ENST00000373484 TRHP20396 242 aaPredicted RBP32.49■■■□□ 2.79
SYNC-201ENST00000373484 HRCP23327 699 aa32.49■■■□□ 2.79
SYNC-201ENST00000373484 HECW1Q76N89 1606 aa32.48■■■□□ 2.79
SYNC-201ENST00000373484 DIP2BQ9P265 1576 aa32.46■■■□□ 2.79
SYNC-201ENST00000373484 ABCC10Q5T3U5 1492 aa32.45■■■□□ 2.79
SYNC-201ENST00000373484 PCF11O94913 1555 aaKnown RBP32.45■■■□□ 2.78
SYNC-201ENST00000373484 ARID3CA6NKF2 412 aa32.43■■■□□ 2.78
SYNC-201ENST00000373484 LRRIQ1Q96JM4 1722 aa32.41■■■□□ 2.78
SYNC-201ENST00000373484 CASKIN1Q8WXD9 1431 aa32.4■■■□□ 2.78
SYNC-201ENST00000373484 WDR7Q9Y4E6 1490 aa32.4■■■□□ 2.78
SYNC-201ENST00000373484 EPRSP07814 1512 aaKnown RBP32.37■■■□□ 2.77
SYNC-201ENST00000373484 FYCO1Q9BQS8 1478 aa32.36■■■□□ 2.77
SYNC-201ENST00000373484 CDK13Q14004 1512 aaKnown RBP32.35■■■□□ 2.77
SYNC-201ENST00000373484 GLI2P10070 1586 aa32.33■■■□□ 2.77
SYNC-201ENST00000373484 ATP1B4Q9UN42 357 aaPredicted RBP32.33■■■□□ 2.77
SYNC-201ENST00000373484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.32■■■□□ 2.76
SYNC-201ENST00000373484 FAM69CQ0P6D2 419 aa32.32■■■□□ 2.76
SYNC-201ENST00000373484 HNRNPUL2Q1KMD3 747 aaKnown RBP32.32■■■□□ 2.76
SYNC-201ENST00000373484 CCDC18Q5T9S5 1454 aa32.26■■■□□ 2.75
SYNC-201ENST00000373484 VPS8Q8N3P4 1428 aa32.22■■■□□ 2.75
SYNC-201ENST00000373484 MAP3K4Q9Y6R4 1608 aa32.22■■■□□ 2.75
SYNC-201ENST00000373484 TSPOAP1O95153 1857 aa32.2■■■□□ 2.75
SYNC-201ENST00000373484 PLEKHD1A6NEE1 506 aa32.2■■■□□ 2.75
SYNC-201ENST00000373484 KCNH8Q96L42 1107 aa32.19■■■□□ 2.74
SYNC-201ENST00000373484 CFAP43Q8NDM7 1665 aa32.18■■■□□ 2.74
SYNC-201ENST00000373484 ABCA9Q8IUA7 1624 aa32.15■■■□□ 2.74
SYNC-201ENST00000373484 PPRC1Q5VV67 1664 aaKnown RBP32.14■■■□□ 2.74
SYNC-201ENST00000373484 CDK11AQ9UQ88 783 aaPredicted RBP32.14■■■□□ 2.74
SYNC-201ENST00000373484 TROQ12816 1431 aaPredicted RBP32.08■■■□□ 2.73
SYNC-201ENST00000373484 MAGI3Q5TCQ9 1506 aa32.08■■■□□ 2.73
SYNC-201ENST00000373484 CD109Q6YHK3 1445 aa32.05■■■□□ 2.72
SYNC-201ENST00000373484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.04■■■□□ 2.72
SYNC-201ENST00000373484 KIF14Q15058 1648 aa32.03■■■□□ 2.72
SYNC-201ENST00000373484 TTC37Q6PGP7 1564 aa32.02■■■□□ 2.72
SYNC-201ENST00000373484 TIAM1Q13009 1591 aa31.99■■■□□ 2.71
SYNC-201ENST00000373484 TEX14Q8IWB6 1497 aa31.98■■■□□ 2.71
SYNC-201ENST00000373484 MAP3K1Q13233 1512 aa31.94■■■□□ 2.7
SYNC-201ENST00000373484 EHBP1L1Q8N3D4 1523 aa31.92■■■□□ 2.7
SYNC-201ENST00000373484 MYO5CQ9NQX4 1742 aa31.92■■■□□ 2.7
SYNC-201ENST00000373484 MTUS2Q5JR59 1369 aa31.91■■■□□ 2.7
SYNC-201ENST00000373484 PCGF6Q9BYE7 350 aa31.89■■■□□ 2.7
SYNC-201ENST00000373484 KDM6BO15054 1643 aa31.85■■■□□ 2.69
SYNC-201ENST00000373484 LRRC9Q6ZRR7 1453 aa31.83■■■□□ 2.69
SYNC-201ENST00000373484 PLCH2O75038 1416 aa31.82■■■□□ 2.68
SYNC-201ENST00000373484 ARAP3Q8WWN8 1544 aa31.82■■■□□ 2.68
SYNC-201ENST00000373484 CDC42BPAQ5VT25 1732 aa31.82■■■□□ 2.68
SYNC-201ENST00000373484 CFAP74Q9C0B2 1584 aa31.82■■■□□ 2.68
SYNC-201ENST00000373484 NEO1Q92859 1461 aa31.81■■■□□ 2.68
SYNC-201ENST00000373484 CDC42BPBQ9Y5S2 1711 aa31.8■■■□□ 2.68
SYNC-201ENST00000373484 SUPT6HQ7KZ85 1726 aaKnown RBP31.8■■■□□ 2.68
SYNC-201ENST00000373484 PREX2Q70Z35 1606 aa31.8■■■□□ 2.68
SYNC-201ENST00000373484 FANCAO15360 1455 aa31.78■■■□□ 2.68
SYNC-201ENST00000373484 APLP2Q06481 763 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms