RNA–Protein interactions for RNA: ENST00000373220.7

CLSPN-203, Transcript of claspin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSPN, Length 3,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-203ENST00000373220 FBXO41Q8TF61 875 aa7.59□□□□□ -1.19
CLSPN-203ENST00000373220 MRC2Q9UBG0 1479 aa7.59□□□□□ -1.19
CLSPN-203ENST00000373220 LMTK3Q96Q04 1460 aa7.59□□□□□ -1.2
CLSPN-203ENST00000373220 LAMC3Q9Y6N6 1575 aa7.58□□□□□ -1.2
CLSPN-203ENST00000373220 RIMBP3CA6NJZ7 1639 aa7.57□□□□□ -1.2
CLSPN-203ENST00000373220 RIMBP3BA6NNM3 1639 aa7.57□□□□□ -1.2
CLSPN-203ENST00000373220 RIMBP3Q9UFD9 1639 aa7.57□□□□□ -1.2
CLSPN-203ENST00000373220 ERICH3Q5RHP9 1530 aa7.57□□□□□ -1.2
CLSPN-203ENST00000373220 TMEM132AQ24JP5 1023 aa7.57□□□□□ -1.2
CLSPN-203ENST00000373220 ARHGEF11O15085 1522 aa7.56□□□□□ -1.2
CLSPN-203ENST00000373220 FOXD1Q16676 465 aa7.56□□□□□ -1.2
CLSPN-203ENST00000373220 CEP162Q5TB80 1403 aa7.56□□□□□ -1.2
CLSPN-203ENST00000373220 THOC2Q8NI27 1593 aaKnown RBP7.56□□□□□ -1.2
CLSPN-203ENST00000373220 GOLGA3Q08378 1498 aa7.56□□□□□ -1.2
CLSPN-203ENST00000373220 NPM2Q86SE8 214 aaKnown RBP7.55□□□□□ -1.2
CLSPN-203ENST00000373220 SOGA1O94964 1423 aa7.55□□□□□ -1.2
CLSPN-203ENST00000373220 NESP48681 1621 aa7.55□□□□□ -1.2
CLSPN-203ENST00000373220 SOCS7O14512 581 aa7.55□□□□□ -1.2
CLSPN-203ENST00000373220 RUSC2Q8N2Y8 1516 aa7.54□□□□□ -1.2
CLSPN-203ENST00000373220 UBTFP17480 764 aaKnown RBP7.54□□□□□ -1.2
CLSPN-203ENST00000373220 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.54□□□□□ -1.2
CLSPN-203ENST00000373220 APLP2Q06481 763 aa7.53□□□□□ -1.2
CLSPN-203ENST00000373220 CCER1Q8TC90 406 aaPredicted RBP7.53□□□□□ -1.2
CLSPN-203ENST00000373220 CEP164Q9UPV0 1460 aa7.53□□□□□ -1.2
CLSPN-203ENST00000373220 ERICH6Q7L0X2 663 aa7.52□□□□□ -1.21
CLSPN-203ENST00000373220 PIAS4Q8N2W9 510 aaPredicted RBP7.52□□□□□ -1.21
CLSPN-203ENST00000373220 PELP1Q8IZL8 1130 aaKnown RBP7.49□□□□□ -1.21
CLSPN-203ENST00000373220 PRXQ9BXM0 1461 aa7.49□□□□□ -1.21
CLSPN-203ENST00000373220 DISP3Q9P2K9 1392 aa7.48□□□□□ -1.21
CLSPN-203ENST00000373220 NPM1P06748 294 aaKnown RBP eCLIP7.48□□□□□ -1.21
CLSPN-203ENST00000373220 TSHZ2Q9NRE2 1034 aa7.46□□□□□ -1.22
CLSPN-203ENST00000373220 CUX1P39880 1505 aa7.45□□□□□ -1.22
CLSPN-203ENST00000373220 ARID3AQ99856 593 aa7.45□□□□□ -1.22
CLSPN-203ENST00000373220 VPS8Q8N3P4 1428 aa7.45□□□□□ -1.22
CLSPN-203ENST00000373220 CADPSQ9ULU8 1353 aa7.44□□□□□ -1.22
CLSPN-203ENST00000373220 CFTRP13569 1480 aa7.44□□□□□ -1.22
CLSPN-203ENST00000373220 MAP3K1Q13233 1512 aa7.43□□□□□ -1.22
CLSPN-203ENST00000373220 ERCC6L2Q5T890 1561 aa7.43□□□□□ -1.22
CLSPN-203ENST00000373220 WDR62O43379 1518 aa7.43□□□□□ -1.22
CLSPN-203ENST00000373220 WDR97A6NE52 1622 aa7.42□□□□□ -1.22
CLSPN-203ENST00000373220 CNKSR2Q8WXI2 1034 aa7.42□□□□□ -1.22
CLSPN-203ENST00000373220 ARAP1Q96P48 1450 aa7.42□□□□□ -1.22
CLSPN-203ENST00000373220 RAPGEF2Q9Y4G8 1499 aa7.42□□□□□ -1.22
CLSPN-203ENST00000373220 CLIP1P30622 1438 aa7.41□□□□□ -1.22
CLSPN-203ENST00000373220 CFAP43Q8NDM7 1665 aa7.41□□□□□ -1.22
CLSPN-203ENST00000373220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.4□□□□□ -1.23
CLSPN-203ENST00000373220 CHMP7Q8WUX9 453 aaPredicted RBP7.38□□□□□ -1.23
CLSPN-203ENST00000373220 KIF21AQ7Z4S6 1674 aa7.37□□□□□ -1.23
CLSPN-203ENST00000373220 RRBP1Q9P2E9 1410 aaKnown RBP7.37□□□□□ -1.23
CLSPN-203ENST00000373220 ATP1B4Q9UN42 357 aaPredicted RBP7.35□□□□□ -1.23
CLSPN-203ENST00000373220 IFT140Q96RY7 1462 aa7.35□□□□□ -1.23
CLSPN-203ENST00000373220 HNRNPUL2Q1KMD3 747 aaKnown RBP7.35□□□□□ -1.23
CLSPN-203ENST00000373220 CTTNBP2Q8WZ74 1663 aa7.34□□□□□ -1.23
CLSPN-203ENST00000373220 FANCD2Q9BXW9 1451 aa7.33□□□□□ -1.24
CLSPN-203ENST00000373220 CENPBP07199 599 aaPredicted RBP7.32□□□□□ -1.24
CLSPN-203ENST00000373220 YTHDC1Q96MU7 727 aaKnown RBP7.32□□□□□ -1.24
CLSPN-203ENST00000373220 SPRYD3Q8NCJ5 442 aa7.32□□□□□ -1.24
CLSPN-203ENST00000373220 CUL7Q14999 1698 aa7.31□□□□□ -1.24
CLSPN-203ENST00000373220 ARHGAP35Q9NRY4 1499 aa7.31□□□□□ -1.24
CLSPN-203ENST00000373220 TIAM1Q13009 1591 aa7.31□□□□□ -1.24
CLSPN-203ENST00000373220 CLSPNQ9HAW4 1339 aa7.31□□□□□ -1.24
CLSPN-203ENST00000373220 LRRIQ1Q96JM4 1722 aa7.31□□□□□ -1.24
CLSPN-203ENST00000373220 FAM69CQ0P6D2 419 aa7.3□□□□□ -1.24
CLSPN-203ENST00000373220 PKD2Q13563 968 aa7.3□□□□□ -1.24
CLSPN-203ENST00000373220 MYT1Q01538 1121 aa7.29□□□□□ -1.24
CLSPN-203ENST00000373220 SCAF1Q9H7N4 1312 aaKnown RBP7.29□□□□□ -1.24
CLSPN-203ENST00000373220 DNMBPQ6XZF7 1577 aa7.29□□□□□ -1.24
CLSPN-203ENST00000373220 FBXO3Q9UK99 471 aa7.29□□□□□ -1.24
CLSPN-203ENST00000373220 EIF5BO60841 1220 aaKnown RBP7.28□□□□□ -1.24
CLSPN-203ENST00000373220 ITGAEP38570 1179 aa7.28□□□□□ -1.24
CLSPN-203ENST00000373220 ABCA5Q8WWZ7 1642 aa7.28□□□□□ -1.24
CLSPN-203ENST00000373220 KIF27Q86VH2 1401 aa7.28□□□□□ -1.24
CLSPN-203ENST00000373220 VASPP50552 380 aaPredicted RBP7.28□□□□□ -1.24
CLSPN-203ENST00000373220 SAMD9Q5K651 1589 aa7.28□□□□□ -1.24
CLSPN-203ENST00000373220 KDM4FA0A1W2PPD8 638 aa7.27□□□□□ -1.24
CLSPN-203ENST00000373220 AQRO60306 1485 aaKnown RBP eCLIP7.27□□□□□ -1.256e-7■■■■■ 49.8
CLSPN-203ENST00000373220 BBXQ8WY36 941 aaPredicted RBP7.27□□□□□ -1.25
CLSPN-203ENST00000373220 EFCAB5A4FU69 1503 aa7.27□□□□□ -1.25
CLSPN-203ENST00000373220 ECM2O94769 699 aaPredicted RBP7.27□□□□□ -1.25
CLSPN-203ENST00000373220 ABCA10Q8WWZ4 1543 aa7.26□□□□□ -1.25
CLSPN-203ENST00000373220 IFNLR1Q8IU57 520 aaPredicted RBP7.26□□□□□ -1.25
CLSPN-203ENST00000373220 SYNJ2O15056 1496 aa7.25□□□□□ -1.25
CLSPN-203ENST00000373220 MAPKBP1O60336 1514 aa7.25□□□□□ -1.25
CLSPN-203ENST00000373220 GAPVD1Q14C86 1478 aa7.24□□□□□ -1.25
CLSPN-203ENST00000373220 PCF11O94913 1555 aaKnown RBP7.24□□□□□ -1.25
CLSPN-203ENST00000373220 DHX57Q6P158 1386 aaKnown RBP7.24□□□□□ -1.25
CLSPN-203ENST00000373220 DIEXFQ68CQ4 756 aaKnown RBP7.23□□□□□ -1.25
CLSPN-203ENST00000373220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLSPN-203ENST00000373220 CHGAP10645 457 aaKnown RBP7.23□□□□□ -1.25
CLSPN-203ENST00000373220 FGD5Q6ZNL6 1462 aa7.23□□□□□ -1.25
CLSPN-203ENST00000373220 IGF1RP08069 1367 aa7.22□□□□□ -1.25
CLSPN-203ENST00000373220 ACIN1Q9UKV3 1341 aaKnown RBP7.21□□□□□ -1.25
CLSPN-203ENST00000373220 FYCO1Q9BQS8 1478 aa7.21□□□□□ -1.26
CLSPN-203ENST00000373220 MAPK8IP2Q13387 824 aaPredicted RBP7.2□□□□□ -1.26
CLSPN-203ENST00000373220 SLC4A2P04920 1241 aa7.2□□□□□ -1.26
CLSPN-203ENST00000373220 SNAPC4Q5SXM2 1469 aa7.2□□□□□ -1.26
CLSPN-203ENST00000373220 LRRC9Q6ZRR7 1453 aa7.2□□□□□ -1.26
CLSPN-203ENST00000373220 KDM6BO15054 1643 aa7.2□□□□□ -1.26
CLSPN-203ENST00000373220 HECW2Q9P2P5 1572 aa7.2□□□□□ -1.26
CLSPN-203ENST00000373220 TARBP1Q13395 1621 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms