RNA–Protein interactions for RNA: ENST00000373220.7

CLSPN-203, Transcript of claspin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSPN, Length 3,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-203ENST00000373220 NISCHQ9Y2I1 1504 aa10.35□□□□□ -0.75
CLSPN-203ENST00000373220 CHIC1Q5VXU3 224 aa10.32□□□□□ -0.76
CLSPN-203ENST00000373220 AEBP2Q6ZN18 517 aaPredicted RBP9.88□□□□□ -0.83
CLSPN-203ENST00000373220 EHMT2Q96KQ7 1210 aa9.75□□□□□ -0.85
CLSPN-203ENST00000373220 SLC24A1O60721 1099 aa9.53□□□□□ -0.88
CLSPN-203ENST00000373220 PHF23Q9BUL5 403 aaPredicted RBP9.27□□□□□ -0.92
CLSPN-203ENST00000373220 ABCC9O60706 1549 aa9.2□□□□□ -0.94
CLSPN-203ENST00000373220 PLPPR3Q6T4P5 718 aa9.08□□□□□ -0.96
CLSPN-203ENST00000373220 CCDC180Q9P1Z9 1646 aa9.04□□□□□ -0.96
CLSPN-203ENST00000373220 DNAJC5Q9H3Z4 198 aa9□□□□□ -0.97
CLSPN-203ENST00000373220 RTN4Q9NQC3 1192 aaKnown RBP8.94□□□□□ -0.98
CLSPN-203ENST00000373220 DNAJC5BQ9UF47 199 aa8.93□□□□□ -0.98
CLSPN-203ENST00000373220 KCNA4P22459 653 aa8.92□□□□□ -0.98
CLSPN-203ENST00000373220 ZCCHC6Q5VYS8 1495 aaKnown RBP8.83□□□□□ -1
CLSPN-203ENST00000373220 CSRNP3Q8WYN3 585 aa8.79□□□□□ -1
CLSPN-203ENST00000373220 DCAF1Q9Y4B6 1507 aa8.73□□□□□ -1.01
CLSPN-203ENST00000373220 AMER1Q5JTC6 1135 aaPredicted RBP8.64□□□□□ -1.03
CLSPN-203ENST00000373220 SLC4A1APQ9BWU0 796 aaKnown RBP8.61□□□□□ -1.03
CLSPN-203ENST00000373220 DCAF8L2P0C7V8 631 aa8.6□□□□□ -1.03
CLSPN-203ENST00000373220 RB1CC1Q8TDY2 1594 aa8.55□□□□□ -1.04
CLSPN-203ENST00000373220 TRIM41Q8WV44 630 aa8.54□□□□□ -1.04
CLSPN-203ENST00000373220 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
CLSPN-203ENST00000373220 ADRA2BP18089 450 aa8.51□□□□□ -1.05
CLSPN-203ENST00000373220 PABPN1Q86U42 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
CLSPN-203ENST00000373220 MYO15BQ96JP2 1530 aa8.5□□□□□ -1.05
CLSPN-203ENST00000373220 SHROOM4Q9ULL8 1493 aa8.42□□□□□ -1.06
CLSPN-203ENST00000373220 SUPT5HO00267 1087 aaKnown RBP8.42□□□□□ -1.06
CLSPN-203ENST00000373220 CECR2Q9BXF3 1484 aa8.41□□□□□ -1.06
CLSPN-203ENST00000373220 NCBP3Q53F19 620 aaKnown RBP8.39□□□□□ -1.07
CLSPN-203ENST00000373220 NACADO15069 1562 aa8.3□□□□□ -1.08
CLSPN-203ENST00000373220 CUX2O14529 1486 aa8.3□□□□□ -1.08
CLSPN-203ENST00000373220 DAXXQ9UER7 740 aaPredicted RBP8.27□□□□□ -1.09
CLSPN-203ENST00000373220 ERCC6Q03468 1493 aa8.24□□□□□ -1.09
CLSPN-203ENST00000373220 HAP1P54257 671 aaPredicted RBP8.18□□□□□ -1.1
CLSPN-203ENST00000373220 EIF4G1Q04637 1599 aaKnown RBP8.17□□□□□ -1.1
CLSPN-203ENST00000373220 TPRNQ4KMQ1 711 aa8.16□□□□□ -1.1
CLSPN-203ENST00000373220 CC2D2AQ9P2K1 1620 aa8.15□□□□□ -1.1
CLSPN-203ENST00000373220 TULP1O00294 542 aaPredicted RBP8.14□□□□□ -1.11
CLSPN-203ENST00000373220 ZBTB22O15209 634 aa8.14□□□□□ -1.11
CLSPN-203ENST00000373220 SENP3Q9H4L4 574 aaPredicted RBP8.13□□□□□ -1.11
CLSPN-203ENST00000373220 TAOK2Q9UL54 1235 aa8.13□□□□□ -1.11
CLSPN-203ENST00000373220 FKBP8Q14318 412 aa8.11□□□□□ -1.11
CLSPN-203ENST00000373220 TIMELESSQ9UNS1 1208 aa8.11□□□□□ -1.11
CLSPN-203ENST00000373220 RSF1Q96T23 1441 aaPredicted RBP8.1□□□□□ -1.11
CLSPN-203ENST00000373220 TRHP20396 242 aaPredicted RBP8.1□□□□□ -1.11
CLSPN-203ENST00000373220 BCANQ96GW7 911 aa8.1□□□□□ -1.11
CLSPN-203ENST00000373220 SCRIBQ14160 1630 aa8.09□□□□□ -1.11
CLSPN-203ENST00000373220 UNC13AQ9UPW8 1703 aa8.08□□□□□ -1.12
CLSPN-203ENST00000373220 PPP6R1Q9UPN7 881 aa8.06□□□□□ -1.12
CLSPN-203ENST00000373220 BAZ1AQ9NRL2 1556 aaPredicted RBP8.05□□□□□ -1.12
CLSPN-203ENST00000373220 PLCB2Q00722 1185 aa8□□□□□ -1.13
CLSPN-203ENST00000373220 NPM3O75607 178 aaKnown RBP7.99□□□□□ -1.13
CLSPN-203ENST00000373220 MROH2BQ7Z745 1585 aa7.97□□□□□ -1.13
CLSPN-203ENST00000373220 OSCARQ8IYS5 282 aa7.97□□□□□ -1.13
CLSPN-203ENST00000373220 PPP4R3CPQ6ZMV5 832 aa7.97□□□□□ -1.13
CLSPN-203ENST00000373220 WIZO95785 1651 aa7.97□□□□□ -1.13
CLSPN-203ENST00000373220 RANGAP1P46060 587 aaPredicted RBP7.96□□□□□ -1.13
CLSPN-203ENST00000373220 HRCP23327 699 aa7.95□□□□□ -1.14
CLSPN-203ENST00000373220 PEG3Q9GZU2 1588 aa7.95□□□□□ -1.14
CLSPN-203ENST00000373220 BICRAQ9NZM4 1560 aa7.93□□□□□ -1.14
CLSPN-203ENST00000373220 SMARCA4P51532 1647 aa7.92□□□□□ -1.14
CLSPN-203ENST00000373220 TOP2AP11388 1531 aaKnown RBP7.92□□□□□ -1.14
CLSPN-203ENST00000373220 ARXQ96QS3 562 aa7.92□□□□□ -1.14
CLSPN-203ENST00000373220 PCGF6Q9BYE7 350 aa7.89□□□□□ -1.15
CLSPN-203ENST00000373220 FAM9AQ8IZU1 332 aaPredicted RBP7.88□□□□□ -1.15
CLSPN-203ENST00000373220 SMARCA2P51531 1590 aa7.87□□□□□ -1.15
CLSPN-203ENST00000373220 ILDR1Q86SU0 546 aaPredicted RBP7.86□□□□□ -1.15
CLSPN-203ENST00000373220 HOMEZQ8IX15 550 aa7.85□□□□□ -1.15
CLSPN-203ENST00000373220 PODXL2Q9NZ53 605 aa7.83□□□□□ -1.16
CLSPN-203ENST00000373220 GTF3C3Q9Y5Q9 886 aa7.81□□□□□ -1.16
CLSPN-203ENST00000373220 FOXD4L1Q9NU39 408 aa7.78□□□□□ -1.16
CLSPN-203ENST00000373220 WRNQ14191 1432 aaPredicted RBP eCLIP7.77□□□□□ -1.17
CLSPN-203ENST00000373220 CYB5RLQ6IPT4 315 aa7.77□□□□□ -1.17
CLSPN-203ENST00000373220 PDS5BQ9NTI5 1447 aa7.76□□□□□ -1.17
CLSPN-203ENST00000373220 C14orf37Q86TY3 774 aa7.75□□□□□ -1.17
CLSPN-203ENST00000373220 LOC105371045A0A1W2PR82 267 aa7.75□□□□□ -1.17
CLSPN-203ENST00000373220 CCDC88BA6NC98 1476 aa7.74□□□□□ -1.17
CLSPN-203ENST00000373220 TRIM26Q12899 539 aaPredicted RBP7.73□□□□□ -1.17
CLSPN-203ENST00000373220 FBLN2P98095 1184 aa7.72□□□□□ -1.17
CLSPN-203ENST00000373220 KIF21BO75037 1637 aa7.72□□□□□ -1.17
CLSPN-203ENST00000373220 PRDM2Q13029 1718 aa7.71□□□□□ -1.18
CLSPN-203ENST00000373220 BIVM-ERCC5R4GMW8 1640 aa7.7□□□□□ -1.18
CLSPN-203ENST00000373220 TTBK1Q5TCY1 1321 aaPredicted RBP7.7□□□□□ -1.18
CLSPN-203ENST00000373220 EEA1Q15075 1411 aa7.7□□□□□ -1.18
CLSPN-203ENST00000373220 CFAP44Q96MT7 982 aa7.69□□□□□ -1.18
CLSPN-203ENST00000373220 ABCC8Q09428 1581 aa7.68□□□□□ -1.18
CLSPN-203ENST00000373220 KDM2AQ9Y2K7 1162 aa7.65□□□□□ -1.18
CLSPN-203ENST00000373220 VSIG10Q8N0Z9 540 aa7.65□□□□□ -1.18
CLSPN-203ENST00000373220 SYNJ1O43426 1573 aa7.64□□□□□ -1.19
CLSPN-203ENST00000373220 PPARGC1BQ86YN6 1023 aaKnown RBP7.64□□□□□ -1.19
CLSPN-203ENST00000373220 TOP2BQ02880 1626 aa7.63□□□□□ -1.19
CLSPN-203ENST00000373220 KLHL34Q8N239 644 aa7.62□□□□□ -1.19
CLSPN-203ENST00000373220 HMGXB3Q12766 1538 aa7.62□□□□□ -1.19
CLSPN-203ENST00000373220 TNIKQ9UKE5 1360 aa7.61□□□□□ -1.19
CLSPN-203ENST00000373220 NCAPD3P42695 1498 aa7.61□□□□□ -1.19
CLSPN-203ENST00000373220 PAXIP1Q6ZW49 1069 aaPredicted RBP7.61□□□□□ -1.19
CLSPN-203ENST00000373220 BAZ1BQ9UIG0 1483 aaKnown RBP7.61□□□□□ -1.19
CLSPN-203ENST00000373220 ZEB1P37275 1124 aaPredicted RBP7.6□□□□□ -1.19
CLSPN-203ENST00000373220 ATAD2BQ9ULI0 1458 aa7.6□□□□□ -1.19
CLSPN-203ENST00000373220 NBR1Q14596 966 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms