RNA–Protein interactions for RNA: ENST00000373103.5

CSF3R-203, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF3R, Length 3,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-203ENST00000373103 FKBP8Q14318 412 aa13.28□□□□□ -0.28
CSF3R-203ENST00000373103 KIF27Q86VH2 1401 aa13.27□□□□□ -0.29
CSF3R-203ENST00000373103 HIRIP3Q9BW71 556 aaPredicted RBP13.26□□□□□ -0.29
CSF3R-203ENST00000373103 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
CSF3R-203ENST00000373103 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
CSF3R-203ENST00000373103 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
CSF3R-203ENST00000373103 TARBP1Q13395 1621 aaKnown RBP13.23□□□□□ -0.29
CSF3R-203ENST00000373103 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
CSF3R-203ENST00000373103 IGF1RP08069 1367 aa13.21□□□□□ -0.3
CSF3R-203ENST00000373103 TRIM52Q96A61 297 aa13.2□□□□□ -0.3
CSF3R-203ENST00000373103 NEFLP07196 543 aa13.19□□□□□ -0.3
CSF3R-203ENST00000373103 DDX10Q13206 875 aaKnown RBP13.18□□□□□ -0.3
CSF3R-203ENST00000373103 PRKCSHP14314 528 aaPredicted RBP13.18□□□□□ -0.3
CSF3R-203ENST00000373103 ATP1B4Q9UN42 357 aaPredicted RBP13.17□□□□□ -0.3
CSF3R-203ENST00000373103 CARMIL1Q5VZK9 1371 aa13.16□□□□□ -0.3
CSF3R-203ENST00000373103 ERICH6Q7L0X2 663 aa13.15□□□□□ -0.3
CSF3R-203ENST00000373103 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
CSF3R-203ENST00000373103 IRX6P78412 446 aaPredicted RBP13.15□□□□□ -0.3
CSF3R-203ENST00000373103 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.3
CSF3R-203ENST00000373103 RAPGEF2Q9Y4G8 1499 aa13.13□□□□□ -0.31
CSF3R-203ENST00000373103 TNIKQ9UKE5 1360 aa13.13□□□□□ -0.31
CSF3R-203ENST00000373103 EEA1Q15075 1411 aa13.12□□□□□ -0.31
CSF3R-203ENST00000373103 SNAPC4Q5SXM2 1469 aa13.12□□□□□ -0.31
CSF3R-203ENST00000373103 WDR97A6NE52 1622 aa13.12□□□□□ -0.31
CSF3R-203ENST00000373103 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
CSF3R-203ENST00000373103 CNGB1Q14028 1251 aaPredicted RBP13.11□□□□□ -0.31
CSF3R-203ENST00000373103 ABCA5Q8WWZ7 1642 aa13.11□□□□□ -0.31
CSF3R-203ENST00000373103 GOLGA3Q08378 1498 aa13.09□□□□□ -0.31
CSF3R-203ENST00000373103 P3H3Q8IVL6 736 aa13.05□□□□□ -0.32
CSF3R-203ENST00000373103 PRXQ9BXM0 1461 aa13.05□□□□□ -0.32
CSF3R-203ENST00000373103 PBRM1Q86U86 1689 aa13.05□□□□□ -0.32
CSF3R-203ENST00000373103 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
CSF3R-203ENST00000373103 ERICH3Q5RHP9 1530 aa13.04□□□□□ -0.32
CSF3R-203ENST00000373103 FHAD1B1AJZ9 1412 aa13.03□□□□□ -0.32
CSF3R-203ENST00000373103 CLIP1P30622 1438 aa13.02□□□□□ -0.32
CSF3R-203ENST00000373103 KANK4Q5T7N3 995 aaPredicted RBP13.01□□□□□ -0.33
CSF3R-203ENST00000373103 SIN3AQ96ST3 1273 aa13□□□□□ -0.33
CSF3R-203ENST00000373103 FAM50AQ14320 339 aaKnown RBP12.99□□□□□ -0.33
CSF3R-203ENST00000373103 ADAMTS12P58397 1594 aa12.99□□□□□ -0.33
CSF3R-203ENST00000373103 MAGI1Q96QZ7 1491 aaPredicted RBP12.98□□□□□ -0.33
CSF3R-203ENST00000373103 SYNJ2O15056 1496 aa12.98□□□□□ -0.33
CSF3R-203ENST00000373103 GRIN2AQ12879 1464 aa12.97□□□□□ -0.33
CSF3R-203ENST00000373103 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
CSF3R-203ENST00000373103 KIF21BO75037 1637 aa12.96□□□□□ -0.33
CSF3R-203ENST00000373103 CUL7Q14999 1698 aa12.96□□□□□ -0.33
CSF3R-203ENST00000373103 ANP32CO43423 234 aa12.93□□□□□ -0.34
CSF3R-203ENST00000373103 CLSPNQ9HAW4 1339 aa12.92□□□□□ -0.34
CSF3R-203ENST00000373103 OSCARQ8IYS5 282 aa12.92□□□□□ -0.34
CSF3R-203ENST00000373103 CHD1O14646 1710 aa12.91□□□□□ -0.34
CSF3R-203ENST00000373103 NBR1Q14596 966 aa12.91□□□□□ -0.34
CSF3R-203ENST00000373103 DHX57Q6P158 1386 aaKnown RBP12.9□□□□□ -0.34
CSF3R-203ENST00000373103 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
CSF3R-203ENST00000373103 JPH4Q96JJ6 628 aa12.9□□□□□ -0.34
CSF3R-203ENST00000373103 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
CSF3R-203ENST00000373103 CEP170Q5SW79 1584 aa12.89□□□□□ -0.35
CSF3R-203ENST00000373103 CDK11AQ9UQ88 783 aaPredicted RBP12.89□□□□□ -0.35
CSF3R-203ENST00000373103 VPS8Q8N3P4 1428 aa12.87□□□□□ -0.35
CSF3R-203ENST00000373103 MSH5O43196 834 aa12.85□□□□□ -0.35
CSF3R-203ENST00000373103 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
CSF3R-203ENST00000373103 NUP160Q12769 1436 aa12.84□□□□□ -0.35
CSF3R-203ENST00000373103 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.36
CSF3R-203ENST00000373103 POLR3GLQ9BT43 218 aa12.83□□□□□ -0.36
CSF3R-203ENST00000373103 ARAP1Q96P48 1450 aa12.82□□□□□ -0.36
CSF3R-203ENST00000373103 IQGAP2Q13576 1575 aa12.82□□□□□ -0.36
CSF3R-203ENST00000373103 ARHGAP35Q9NRY4 1499 aa12.8□□□□□ -0.36
CSF3R-203ENST00000373103 PRG4Q92954 1404 aaPredicted RBP12.8□□□□□ -0.36
CSF3R-203ENST00000373103 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
CSF3R-203ENST00000373103 CTTNBP2Q8WZ74 1663 aa12.79□□□□□ -0.36
CSF3R-203ENST00000373103 B4GALNT3Q6L9W6 998 aa12.78□□□□□ -0.36
CSF3R-203ENST00000373103 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.37
CSF3R-203ENST00000373103 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
CSF3R-203ENST00000373103 DISP1Q96F81 1524 aa12.73□□□□□ -0.37
CSF3R-203ENST00000373103 DEKP35659 375 aaKnown RBP12.73□□□□□ -0.37
CSF3R-203ENST00000373103 CYB5RLQ6IPT4 315 aa12.73□□□□□ -0.37
CSF3R-203ENST00000373103 CARMIL2Q6F5E8 1435 aa12.72□□□□□ -0.37
CSF3R-203ENST00000373103 RAB3GAP2Q9H2M9 1393 aa12.72□□□□□ -0.37
CSF3R-203ENST00000373103 CLASP1Q7Z460 1538 aa12.71□□□□□ -0.37
CSF3R-203ENST00000373103 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
CSF3R-203ENST00000373103 UGGT2Q9NYU1 1516 aa12.7□□□□□ -0.38
CSF3R-203ENST00000373103 CCNB3Q8WWL7 1395 aa12.69□□□□□ -0.38
CSF3R-203ENST00000373103 PTPRGP23470 1445 aa12.69□□□□□ -0.38
CSF3R-203ENST00000373103 KIAA0556O60303 1618 aa12.68□□□□□ -0.38
CSF3R-203ENST00000373103 PLB1Q6P1J6 1458 aa12.67□□□□□ -0.38
CSF3R-203ENST00000373103 PPP1R15AO75807 674 aaPredicted RBP12.65□□□□□ -0.38
CSF3R-203ENST00000373103 SAMD9Q5K651 1589 aa12.65□□□□□ -0.38
CSF3R-203ENST00000373103 EFCAB5A4FU69 1503 aa12.65□□□□□ -0.38
CSF3R-203ENST00000373103 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
CSF3R-203ENST00000373103 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
CSF3R-203ENST00000373103 CHIC2Q9UKJ5 165 aa12.63□□□□□ -0.39
CSF3R-203ENST00000373103 FMN1Q68DA7 1419 aa12.63□□□□□ -0.39
CSF3R-203ENST00000373103 ANO8Q9HCE9 1232 aaPredicted RBP12.63□□□□□ -0.39
CSF3R-203ENST00000373103 SALL2Q9Y467 1007 aaPredicted RBP12.63□□□□□ -0.39
CSF3R-203ENST00000373103 CCDC136Q96JN2 1154 aa12.62□□□□□ -0.39
CSF3R-203ENST00000373103 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
CSF3R-203ENST00000373103 SHROOM2Q13796 1616 aa12.61□□□□□ -0.39
CSF3R-203ENST00000373103 PCF11O94913 1555 aaKnown RBP12.61□□□□□ -0.39
CSF3R-203ENST00000373103 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
CSF3R-203ENST00000373103 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
CSF3R-203ENST00000373103 PAK3O75914 559 aaPredicted RBP12.6□□□□□ -0.39
CSF3R-203ENST00000373103 ZNF326Q5BKZ1 582 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms