RNA–Protein interactions for RNA: ENST00000373103.5

CSF3R-203, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF3R, Length 3,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-203ENST00000373103 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
CSF3R-203ENST00000373103 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
CSF3R-203ENST00000373103 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
CSF3R-203ENST00000373103 ABCC9O60706 1549 aa15.95■□□□□ 0.14
CSF3R-203ENST00000373103 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
CSF3R-203ENST00000373103 SHROOM4Q9ULL8 1493 aa15.68■□□□□ 0.1
CSF3R-203ENST00000373103 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
CSF3R-203ENST00000373103 PCGF6Q9BYE7 350 aa15.4■□□□□ 0.06
CSF3R-203ENST00000373103 PPARGC1BQ86YN6 1023 aaKnown RBP15.35■□□□□ 0.05
CSF3R-203ENST00000373103 HRCP23327 699 aa15.24■□□□□ 0.03
CSF3R-203ENST00000373103 NACADO15069 1562 aa15.23■□□□□ 0.03
CSF3R-203ENST00000373103 DCAF1Q9Y4B6 1507 aa15.23■□□□□ 0.03
CSF3R-203ENST00000373103 RB1CC1Q8TDY2 1594 aa15.21■□□□□ 0.03
CSF3R-203ENST00000373103 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
CSF3R-203ENST00000373103 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
CSF3R-203ENST00000373103 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.014e-7■■□□□ 12.2
CSF3R-203ENST00000373103 EHMT2Q96KQ7 1210 aa14.95□□□□□ -0.02
CSF3R-203ENST00000373103 LOC105371045A0A1W2PR82 267 aa14.93□□□□□ -0.02
CSF3R-203ENST00000373103 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
CSF3R-203ENST00000373103 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
CSF3R-203ENST00000373103 BICRAQ9NZM4 1560 aa14.78□□□□□ -0.04
CSF3R-203ENST00000373103 FAM9AQ8IZU1 332 aaPredicted RBP14.68□□□□□ -0.06
CSF3R-203ENST00000373103 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
CSF3R-203ENST00000373103 CECR2Q9BXF3 1484 aa14.65□□□□□ -0.06
CSF3R-203ENST00000373103 TRIM26Q12899 539 aaPredicted RBP14.55□□□□□ -0.08
CSF3R-203ENST00000373103 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
CSF3R-203ENST00000373103 TTBK1Q5TCY1 1321 aaPredicted RBP14.49□□□□□ -0.09
CSF3R-203ENST00000373103 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
CSF3R-203ENST00000373103 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
CSF3R-203ENST00000373103 DNAJC5BQ9UF47 199 aa14.4□□□□□ -0.1
CSF3R-203ENST00000373103 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
CSF3R-203ENST00000373103 BAZ1AQ9NRL2 1556 aaPredicted RBP14.38□□□□□ -0.11
CSF3R-203ENST00000373103 SMARCA4P51532 1647 aa14.37□□□□□ -0.11
CSF3R-203ENST00000373103 WIZO95785 1651 aa14.33□□□□□ -0.11
CSF3R-203ENST00000373103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.3□□□□□ -0.12
CSF3R-203ENST00000373103 ZEB1P37275 1124 aaPredicted RBP14.3□□□□□ -0.12
CSF3R-203ENST00000373103 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
CSF3R-203ENST00000373103 CC2D2AQ9P2K1 1620 aa14.28□□□□□ -0.12
CSF3R-203ENST00000373103 CCER1Q8TC90 406 aaPredicted RBP14.26□□□□□ -0.13
CSF3R-203ENST00000373103 YTHDC1Q96MU7 727 aaKnown RBP14.26□□□□□ -0.13
CSF3R-203ENST00000373103 ATAD2BQ9ULI0 1458 aa14.26□□□□□ -0.13
CSF3R-203ENST00000373103 GTF3C3Q9Y5Q9 886 aa14.22□□□□□ -0.13
CSF3R-203ENST00000373103 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
CSF3R-203ENST00000373103 BAZ1BQ9UIG0 1483 aaKnown RBP14.19□□□□□ -0.14
CSF3R-203ENST00000373103 SMARCA2P51531 1590 aa14.16□□□□□ -0.14
CSF3R-203ENST00000373103 MYT1Q01538 1121 aa14.16□□□□□ -0.14
CSF3R-203ENST00000373103 ACIN1Q9UKV3 1341 aaKnown RBP14.13□□□□□ -0.15
CSF3R-203ENST00000373103 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
CSF3R-203ENST00000373103 CENPBP07199 599 aaPredicted RBP14.08□□□□□ -0.16
CSF3R-203ENST00000373103 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.16
CSF3R-203ENST00000373103 DIEXFQ68CQ4 756 aaKnown RBP14.08□□□□□ -0.16
CSF3R-203ENST00000373103 TOP2AP11388 1531 aaKnown RBP14.07□□□□□ -0.16
CSF3R-203ENST00000373103 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
CSF3R-203ENST00000373103 HMGXB3Q12766 1538 aa14.01□□□□□ -0.17
CSF3R-203ENST00000373103 NESP48681 1621 aa13.9□□□□□ -0.18
CSF3R-203ENST00000373103 RANGAP1P46060 587 aaPredicted RBP13.86□□□□□ -0.19
CSF3R-203ENST00000373103 CADPSQ9ULU8 1353 aa13.82□□□□□ -0.2
CSF3R-203ENST00000373103 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
CSF3R-203ENST00000373103 CFTRP13569 1480 aa13.75□□□□□ -0.21
CSF3R-203ENST00000373103 UBTFP17480 764 aaKnown RBP13.74□□□□□ -0.21
CSF3R-203ENST00000373103 MIER1Q8N108 512 aa13.73□□□□□ -0.21
CSF3R-203ENST00000373103 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
CSF3R-203ENST00000373103 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
CSF3R-203ENST00000373103 FANCD2Q9BXW9 1451 aa13.68□□□□□ -0.22
CSF3R-203ENST00000373103 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
CSF3R-203ENST00000373103 PDS5BQ9NTI5 1447 aa13.65□□□□□ -0.22
CSF3R-203ENST00000373103 LAMC3Q9Y6N6 1575 aa13.64□□□□□ -0.23
CSF3R-203ENST00000373103 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
CSF3R-203ENST00000373103 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
CSF3R-203ENST00000373103 BCANQ96GW7 911 aa13.6□□□□□ -0.23
CSF3R-203ENST00000373103 KIF21AQ7Z4S6 1674 aa13.58□□□□□ -0.24
CSF3R-203ENST00000373103 SYNJ1O43426 1573 aa13.53□□□□□ -0.24
CSF3R-203ENST00000373103 CUX1P39880 1505 aa13.53□□□□□ -0.24
CSF3R-203ENST00000373103 URB2Q14146 1524 aaKnown RBP13.51□□□□□ -0.25
CSF3R-203ENST00000373103 APLP2Q06481 763 aa13.5□□□□□ -0.25
CSF3R-203ENST00000373103 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
CSF3R-203ENST00000373103 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
CSF3R-203ENST00000373103 MRC2Q9UBG0 1479 aa13.47□□□□□ -0.25
CSF3R-203ENST00000373103 SOGA1O94964 1423 aa13.46□□□□□ -0.25
CSF3R-203ENST00000373103 ITGAEP38570 1179 aa13.46□□□□□ -0.26
CSF3R-203ENST00000373103 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.26
CSF3R-203ENST00000373103 FGD5Q6ZNL6 1462 aa13.45□□□□□ -0.26
CSF3R-203ENST00000373103 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
CSF3R-203ENST00000373103 BCL11AQ9H165 835 aa13.43□□□□□ -0.26
CSF3R-203ENST00000373103 TOP2BQ02880 1626 aa13.41□□□□□ -0.26
CSF3R-203ENST00000373103 POLA1P09884 1462 aaPredicted RBP13.41□□□□□ -0.26
CSF3R-203ENST00000373103 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
CSF3R-203ENST00000373103 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
CSF3R-203ENST00000373103 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
CSF3R-203ENST00000373103 SUPT16HQ9Y5B9 1047 aaKnown RBP13.37□□□□□ -0.27
CSF3R-203ENST00000373103 CUX2O14529 1486 aa13.36□□□□□ -0.27
CSF3R-203ENST00000373103 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
CSF3R-203ENST00000373103 WDR62O43379 1518 aa13.34□□□□□ -0.27
CSF3R-203ENST00000373103 AQRO60306 1485 aaKnown RBP eCLIP13.33□□□□□ -0.282e-11■■■■■ 56.9
CSF3R-203ENST00000373103 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
CSF3R-203ENST00000373103 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
CSF3R-203ENST00000373103 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
CSF3R-203ENST00000373103 CEP162Q5TB80 1403 aa13.29□□□□□ -0.28
CSF3R-203ENST00000373103 FBLN2P98095 1184 aa13.28□□□□□ -0.28
CSF3R-203ENST00000373103 TSHZ2Q9NRE2 1034 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms