RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
SNCG-202ENST00000372017 RAPGEF2Q9Y4G8 1499 aa21.17■□□□□ 0.98
SNCG-202ENST00000372017 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
SNCG-202ENST00000372017 PRXQ9BXM0 1461 aa21.16■□□□□ 0.98
SNCG-202ENST00000372017 KIAA0586Q9BVV6 1533 aa21.13■□□□□ 0.97
SNCG-202ENST00000372017 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
SNCG-202ENST00000372017 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
SNCG-202ENST00000372017 JPH4Q96JJ6 628 aa21.1■□□□□ 0.97
SNCG-202ENST00000372017 EEA1Q15075 1411 aa21.09■□□□□ 0.97
SNCG-202ENST00000372017 PRG4Q92954 1404 aaPredicted RBP21.06■□□□□ 0.96
SNCG-202ENST00000372017 IQGAP2Q13576 1575 aa21.02■□□□□ 0.96
SNCG-202ENST00000372017 CTTNBP2Q8WZ74 1663 aa21.01■□□□□ 0.95
SNCG-202ENST00000372017 KIF21BO75037 1637 aa20.95■□□□□ 0.94
SNCG-202ENST00000372017 UGGT2Q9NYU1 1516 aa20.94■□□□□ 0.94
SNCG-202ENST00000372017 DISP1Q96F81 1524 aa20.93■□□□□ 0.94
SNCG-202ENST00000372017 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
SNCG-202ENST00000372017 KIAA0556O60303 1618 aa20.86■□□□□ 0.93
SNCG-202ENST00000372017 CARMIL2Q6F5E8 1435 aa20.84■□□□□ 0.93
SNCG-202ENST00000372017 TNIKQ9UKE5 1360 aa20.81■□□□□ 0.92
SNCG-202ENST00000372017 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
SNCG-202ENST00000372017 GOLGA3Q08378 1498 aa20.8■□□□□ 0.92
SNCG-202ENST00000372017 PTPRGP23470 1445 aa20.78■□□□□ 0.92
SNCG-202ENST00000372017 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
SNCG-202ENST00000372017 ADCY10Q96PN6 1610 aa20.78■□□□□ 0.92
SNCG-202ENST00000372017 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
SNCG-202ENST00000372017 UBTFP17480 764 aaKnown RBP20.72■□□□□ 0.91
SNCG-202ENST00000372017 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
SNCG-202ENST00000372017 P3H3Q8IVL6 736 aa20.72■□□□□ 0.91
SNCG-202ENST00000372017 UACAQ9BZF9 1416 aa20.67■□□□□ 0.9
SNCG-202ENST00000372017 PLB1Q6P1J6 1458 aa20.66■□□□□ 0.9
SNCG-202ENST00000372017 ABCC2Q92887 1545 aa20.64■□□□□ 0.9
SNCG-202ENST00000372017 UHRF1BP1LA0JNW5 1464 aa20.64■□□□□ 0.89
SNCG-202ENST00000372017 ABCA8O94911 1581 aa20.63■□□□□ 0.89
SNCG-202ENST00000372017 FHOD3Q2V2M9 1422 aa20.62■□□□□ 0.89
SNCG-202ENST00000372017 EFCAB5A4FU69 1503 aa20.6■□□□□ 0.89
SNCG-202ENST00000372017 ARHGAP35Q9NRY4 1499 aa20.59■□□□□ 0.89
SNCG-202ENST00000372017 MAPKBP1O60336 1514 aa20.58■□□□□ 0.88
SNCG-202ENST00000372017 KDM5BQ9UGL1 1544 aa20.57■□□□□ 0.88
SNCG-202ENST00000372017 NPM1P06748 294 aaKnown RBP eCLIP20.56■□□□□ 0.88
SNCG-202ENST00000372017 ZCCHC11Q5TAX3 1644 aaKnown RBP20.56■□□□□ 0.88
SNCG-202ENST00000372017 KIF13AQ9H1H9 1805 aa20.55■□□□□ 0.88
SNCG-202ENST00000372017 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
SNCG-202ENST00000372017 RAPGEF6Q8TEU7 1601 aa20.52■□□□□ 0.88
SNCG-202ENST00000372017 ABCC10Q5T3U5 1492 aa20.49■□□□□ 0.87
SNCG-202ENST00000372017 DIP2BQ9P265 1576 aa20.48■□□□□ 0.87
SNCG-202ENST00000372017 ASXL2Q76L83 1435 aa20.48■□□□□ 0.87
SNCG-202ENST00000372017 ARID3CA6NKF2 412 aa20.47■□□□□ 0.87
SNCG-202ENST00000372017 ATP10BO94823 1461 aa20.46■□□□□ 0.87
SNCG-202ENST00000372017 NUP153P49790 1475 aaKnown RBP20.46■□□□□ 0.87
SNCG-202ENST00000372017 CLIP1P30622 1438 aa20.43■□□□□ 0.86
SNCG-202ENST00000372017 FAM69CQ0P6D2 419 aa20.42■□□□□ 0.86
SNCG-202ENST00000372017 FMN1Q68DA7 1419 aa20.39■□□□□ 0.85
SNCG-202ENST00000372017 CEP162Q5TB80 1403 aa20.38■□□□□ 0.85
SNCG-202ENST00000372017 EPRSP07814 1512 aaKnown RBP20.37■□□□□ 0.85
SNCG-202ENST00000372017 WDR7Q9Y4E6 1490 aa20.37■□□□□ 0.85
SNCG-202ENST00000372017 LRRIQ1Q96JM4 1722 aa20.37■□□□□ 0.85
SNCG-202ENST00000372017 GLI2P10070 1586 aa20.36■□□□□ 0.85
SNCG-202ENST00000372017 CDK13Q14004 1512 aaKnown RBP20.34■□□□□ 0.85
SNCG-202ENST00000372017 PCF11O94913 1555 aaKnown RBP20.34■□□□□ 0.85
SNCG-202ENST00000372017 TSPOAP1O95153 1857 aa20.33■□□□□ 0.85
SNCG-202ENST00000372017 HECW1Q76N89 1606 aa20.31■□□□□ 0.84
SNCG-202ENST00000372017 PPRC1Q5VV67 1664 aaKnown RBP20.31■□□□□ 0.84
SNCG-202ENST00000372017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
SNCG-202ENST00000372017 HNRNPUL2Q1KMD3 747 aaKnown RBP20.3■□□□□ 0.84
SNCG-202ENST00000372017 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
SNCG-202ENST00000372017 ATP1B4Q9UN42 357 aaPredicted RBP20.3■□□□□ 0.84
SNCG-202ENST00000372017 MAP3K4Q9Y6R4 1608 aa20.3■□□□□ 0.84
SNCG-202ENST00000372017 CASKIN1Q8WXD9 1431 aa20.28■□□□□ 0.84
SNCG-202ENST00000372017 FYCO1Q9BQS8 1478 aa20.23■□□□□ 0.83
SNCG-202ENST00000372017 CFAP43Q8NDM7 1665 aa20.22■□□□□ 0.83
SNCG-202ENST00000372017 ABCA9Q8IUA7 1624 aa20.21■□□□□ 0.83
SNCG-202ENST00000372017 PLEKHD1A6NEE1 506 aa20.2■□□□□ 0.82
SNCG-202ENST00000372017 KDM6BO15054 1643 aa20.2■□□□□ 0.82
SNCG-202ENST00000372017 CD109Q6YHK3 1445 aa20.19■□□□□ 0.82
SNCG-202ENST00000372017 MAGI3Q5TCQ9 1506 aa20.18■□□□□ 0.82
SNCG-202ENST00000372017 CCDC18Q5T9S5 1454 aa20.16■□□□□ 0.82
SNCG-202ENST00000372017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.16■□□□□ 0.82
SNCG-202ENST00000372017 KIF14Q15058 1648 aa20.14■□□□□ 0.81
SNCG-202ENST00000372017 TTC37Q6PGP7 1564 aa20.14■□□□□ 0.81
SNCG-202ENST00000372017 COL17A1Q9UMD9 1497 aaPredicted RBP20.11■□□□□ 0.81
SNCG-202ENST00000372017 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
SNCG-202ENST00000372017 VPS8Q8N3P4 1428 aa20.11■□□□□ 0.81
SNCG-202ENST00000372017 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
SNCG-202ENST00000372017 TEX14Q8IWB6 1497 aa20.09■□□□□ 0.81
SNCG-202ENST00000372017 KDM4FA0A1W2PPD8 638 aa20.05■□□□□ 0.8
SNCG-202ENST00000372017 MYO5CQ9NQX4 1742 aa20.01■□□□□ 0.79
SNCG-202ENST00000372017 PLCH2O75038 1416 aa20.01■□□□□ 0.79
SNCG-202ENST00000372017 TIAM1Q13009 1591 aa20■□□□□ 0.79
SNCG-202ENST00000372017 CDC42BPBQ9Y5S2 1711 aa19.99■□□□□ 0.79
SNCG-202ENST00000372017 NEO1Q92859 1461 aa19.98■□□□□ 0.79
SNCG-202ENST00000372017 ARAP3Q8WWN8 1544 aa19.97■□□□□ 0.79
SNCG-202ENST00000372017 FANCAO15360 1455 aa19.97■□□□□ 0.79
SNCG-202ENST00000372017 CDC42BPAQ5VT25 1732 aa19.96■□□□□ 0.79
SNCG-202ENST00000372017 MTUS2Q5JR59 1369 aa19.95■□□□□ 0.79
SNCG-202ENST00000372017 EHBP1L1Q8N3D4 1523 aa19.95■□□□□ 0.78
SNCG-202ENST00000372017 AKNAQ7Z591 1439 aa19.94■□□□□ 0.78
SNCG-202ENST00000372017 PREX2Q70Z35 1606 aa19.94■□□□□ 0.78
SNCG-202ENST00000372017 KANK4Q5T7N3 995 aaPredicted RBP19.93■□□□□ 0.78
SNCG-202ENST00000372017 MAP3K1Q13233 1512 aa19.92■□□□□ 0.78
SNCG-202ENST00000372017 FRMPD1Q5SYB0 1578 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms