RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
SNCG-202ENST00000372017 CCDC180Q9P1Z9 1646 aa27.15■■□□□ 1.94
SNCG-202ENST00000372017 ABCC9O60706 1549 aa26.53■■□□□ 1.84
SNCG-202ENST00000372017 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
SNCG-202ENST00000372017 DCAF8L2P0C7V8 631 aa25.51■■□□□ 1.67
SNCG-202ENST00000372017 RB1CC1Q8TDY2 1594 aa25.49■■□□□ 1.67
SNCG-202ENST00000372017 NACADO15069 1562 aa25.48■■□□□ 1.67
SNCG-202ENST00000372017 MYO15BQ96JP2 1530 aa25.34■■□□□ 1.65
SNCG-202ENST00000372017 DCAF1Q9Y4B6 1507 aa25.29■■□□□ 1.64
SNCG-202ENST00000372017 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
SNCG-202ENST00000372017 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
SNCG-202ENST00000372017 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
SNCG-202ENST00000372017 SCRIBQ14160 1630 aa24.83■■□□□ 1.56
SNCG-202ENST00000372017 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
SNCG-202ENST00000372017 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
SNCG-202ENST00000372017 EIF4G1Q04637 1599 aaKnown RBP24.12■■□□□ 1.45
SNCG-202ENST00000372017 CC2D2AQ9P2K1 1620 aa24.01■■□□□ 1.43
SNCG-202ENST00000372017 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
SNCG-202ENST00000372017 SMARCA4P51532 1647 aa23.74■■□□□ 1.39
SNCG-202ENST00000372017 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
SNCG-202ENST00000372017 MROH2BQ7Z745 1585 aa23.64■■□□□ 1.37
SNCG-202ENST00000372017 ATAD2BQ9ULI0 1458 aa23.59■■□□□ 1.37
SNCG-202ENST00000372017 NCAPD3P42695 1498 aa23.54■■□□□ 1.36
SNCG-202ENST00000372017 SMARCA2P51531 1590 aa23.5■■□□□ 1.35
SNCG-202ENST00000372017 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
SNCG-202ENST00000372017 HMGXB3Q12766 1538 aa23.41■■□□□ 1.34
SNCG-202ENST00000372017 WIZO95785 1651 aa23.4■■□□□ 1.34
SNCG-202ENST00000372017 RSF1Q96T23 1441 aaPredicted RBP23.37■■□□□ 1.33
SNCG-202ENST00000372017 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
SNCG-202ENST00000372017 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.29
SNCG-202ENST00000372017 DNAJC5Q9H3Z4 198 aa23.06■■□□□ 1.28
SNCG-202ENST00000372017 NESP48681 1621 aa23.02■■□□□ 1.28
SNCG-202ENST00000372017 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.25
SNCG-202ENST00000372017 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
SNCG-202ENST00000372017 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
SNCG-202ENST00000372017 ERCC6Q03468 1493 aa22.85■■□□□ 1.25
SNCG-202ENST00000372017 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
SNCG-202ENST00000372017 CUX2O14529 1486 aa22.8■■□□□ 1.24
SNCG-202ENST00000372017 KIF21AQ7Z4S6 1674 aa22.75■■□□□ 1.23
SNCG-202ENST00000372017 CFTRP13569 1480 aa22.75■■□□□ 1.23
SNCG-202ENST00000372017 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
SNCG-202ENST00000372017 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
SNCG-202ENST00000372017 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
SNCG-202ENST00000372017 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
SNCG-202ENST00000372017 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
SNCG-202ENST00000372017 MRC2Q9UBG0 1479 aa22.49■■□□□ 1.19
SNCG-202ENST00000372017 WDR62O43379 1518 aa22.44■■□□□ 1.18
SNCG-202ENST00000372017 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
SNCG-202ENST00000372017 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
SNCG-202ENST00000372017 DNMBPQ6XZF7 1577 aa22.22■■□□□ 1.15
SNCG-202ENST00000372017 ABCC8Q09428 1581 aa22.18■■□□□ 1.14
SNCG-202ENST00000372017 CUX1P39880 1505 aa22.16■■□□□ 1.14
SNCG-202ENST00000372017 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
SNCG-202ENST00000372017 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
SNCG-202ENST00000372017 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
SNCG-202ENST00000372017 TARBP1Q13395 1621 aaKnown RBP22.05■■□□□ 1.12
SNCG-202ENST00000372017 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
SNCG-202ENST00000372017 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
SNCG-202ENST00000372017 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
SNCG-202ENST00000372017 SYNJ1O43426 1573 aa22■■□□□ 1.11
SNCG-202ENST00000372017 WRNQ14191 1432 aaPredicted RBP eCLIP21.98■■□□□ 1.11
SNCG-202ENST00000372017 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
SNCG-202ENST00000372017 SOGA1O94964 1423 aa21.97■■□□□ 1.11
SNCG-202ENST00000372017 TOP2BQ02880 1626 aa21.95■■□□□ 1.1
SNCG-202ENST00000372017 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
SNCG-202ENST00000372017 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.16e-6■■■■□ 25.1
SNCG-202ENST00000372017 WDR97A6NE52 1622 aa21.9■■□□□ 1.1
SNCG-202ENST00000372017 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
SNCG-202ENST00000372017 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
SNCG-202ENST00000372017 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
SNCG-202ENST00000372017 ABCA5Q8WWZ7 1642 aa21.75■■□□□ 1.07
SNCG-202ENST00000372017 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
SNCG-202ENST00000372017 PBRM1Q86U86 1689 aa21.71■■□□□ 1.07
SNCG-202ENST00000372017 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
SNCG-202ENST00000372017 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
SNCG-202ENST00000372017 CHD1O14646 1710 aa21.65■■□□□ 1.06
SNCG-202ENST00000372017 MAGI1Q96QZ7 1491 aaPredicted RBP21.6■■□□□ 1.05
SNCG-202ENST00000372017 FBLN2P98095 1184 aa21.56■■□□□ 1.04
SNCG-202ENST00000372017 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
SNCG-202ENST00000372017 SYNJ2O15056 1496 aa21.53■■□□□ 1.04
SNCG-202ENST00000372017 ADAMTS12P58397 1594 aa21.52■■□□□ 1.04
SNCG-202ENST00000372017 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
SNCG-202ENST00000372017 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
SNCG-202ENST00000372017 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
SNCG-202ENST00000372017 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
SNCG-202ENST00000372017 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
SNCG-202ENST00000372017 RUSC2Q8N2Y8 1516 aa21.47■■□□□ 1.03
SNCG-202ENST00000372017 IGF1RP08069 1367 aa21.46■■□□□ 1.03
SNCG-202ENST00000372017 FHAD1B1AJZ9 1412 aa21.45■■□□□ 1.02
SNCG-202ENST00000372017 GRIN2AQ12879 1464 aa21.43■■□□□ 1.02
SNCG-202ENST00000372017 CLASP1Q7Z460 1538 aa21.4■■□□□ 1.02
SNCG-202ENST00000372017 ARHGEF11O15085 1522 aa21.39■■□□□ 1.02
SNCG-202ENST00000372017 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
SNCG-202ENST00000372017 CEP170Q5SW79 1584 aa21.37■■□□□ 1.01
SNCG-202ENST00000372017 CUL7Q14999 1698 aa21.34■■□□□ 1.01
SNCG-202ENST00000372017 NUP160Q12769 1436 aa21.34■■□□□ 1.01
SNCG-202ENST00000372017 CARMIL1Q5VZK9 1371 aa21.3■■□□□ 1
SNCG-202ENST00000372017 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
SNCG-202ENST00000372017 TRHP20396 242 aaPredicted RBP21.19■□□□□ 0.98
SNCG-202ENST00000372017 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms