RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
EXOSC1-202ENST00000370885 CUL7Q14999 1698 aa19.04■□□□□ 0.64
EXOSC1-202ENST00000370885 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
EXOSC1-202ENST00000370885 KIAA0586Q9BVV6 1533 aa18.99■□□□□ 0.63
EXOSC1-202ENST00000370885 ADCY10Q96PN6 1610 aa18.85■□□□□ 0.61
EXOSC1-202ENST00000370885 RAPGEF2Q9Y4G8 1499 aa18.84■□□□□ 0.61
EXOSC1-202ENST00000370885 IQGAP2Q13576 1575 aa18.81■□□□□ 0.6
EXOSC1-202ENST00000370885 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
EXOSC1-202ENST00000370885 DISP1Q96F81 1524 aa18.79■□□□□ 0.6
EXOSC1-202ENST00000370885 TTBK1Q5TCY1 1321 aaPredicted RBP18.76■□□□□ 0.59
EXOSC1-202ENST00000370885 PTPRGP23470 1445 aa18.76■□□□□ 0.59
EXOSC1-202ENST00000370885 PRXQ9BXM0 1461 aa18.75■□□□□ 0.59
EXOSC1-202ENST00000370885 TNIKQ9UKE5 1360 aa18.74■□□□□ 0.59
EXOSC1-202ENST00000370885 UGGT2Q9NYU1 1516 aa18.73■□□□□ 0.59
EXOSC1-202ENST00000370885 MAPKBP1O60336 1514 aa18.72■□□□□ 0.59
EXOSC1-202ENST00000370885 CARMIL2Q6F5E8 1435 aa18.72■□□□□ 0.59
EXOSC1-202ENST00000370885 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
EXOSC1-202ENST00000370885 NPM1P06748 294 aaKnown RBP eCLIP18.69■□□□□ 0.58
EXOSC1-202ENST00000370885 CTTNBP2Q8WZ74 1663 aa18.68■□□□□ 0.58
EXOSC1-202ENST00000370885 FAM69CQ0P6D2 419 aa18.67■□□□□ 0.58
EXOSC1-202ENST00000370885 DIP2BQ9P265 1576 aa18.67■□□□□ 0.58
EXOSC1-202ENST00000370885 KIAA0556O60303 1618 aa18.67■□□□□ 0.58
EXOSC1-202ENST00000370885 ABCC2Q92887 1545 aa18.64■□□□□ 0.57
EXOSC1-202ENST00000370885 UACAQ9BZF9 1416 aa18.63■□□□□ 0.57
EXOSC1-202ENST00000370885 UHRF1BP1LA0JNW5 1464 aa18.63■□□□□ 0.57
EXOSC1-202ENST00000370885 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
EXOSC1-202ENST00000370885 ASXL2Q76L83 1435 aa18.57■□□□□ 0.56
EXOSC1-202ENST00000370885 KDM5BQ9UGL1 1544 aa18.57■□□□□ 0.56
EXOSC1-202ENST00000370885 PLB1Q6P1J6 1458 aa18.56■□□□□ 0.56
EXOSC1-202ENST00000370885 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
EXOSC1-202ENST00000370885 TSPOAP1O95153 1857 aa18.54■□□□□ 0.56
EXOSC1-202ENST00000370885 ZCCHC11Q5TAX3 1644 aaKnown RBP18.53■□□□□ 0.56
EXOSC1-202ENST00000370885 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.56
EXOSC1-202ENST00000370885 GOLGA3Q08378 1498 aa18.52■□□□□ 0.55
EXOSC1-202ENST00000370885 ABCA8O94911 1581 aa18.51■□□□□ 0.55
EXOSC1-202ENST00000370885 P3H3Q8IVL6 736 aa18.51■□□□□ 0.55
EXOSC1-202ENST00000370885 PPRC1Q5VV67 1664 aaKnown RBP18.5■□□□□ 0.55
EXOSC1-202ENST00000370885 EEA1Q15075 1411 aa18.49■□□□□ 0.55
EXOSC1-202ENST00000370885 GLI2P10070 1586 aa18.48■□□□□ 0.55
EXOSC1-202ENST00000370885 EPRSP07814 1512 aaKnown RBP18.47■□□□□ 0.55
EXOSC1-202ENST00000370885 SAMD9Q5K651 1589 aa18.46■□□□□ 0.55
EXOSC1-202ENST00000370885 KDM6BO15054 1643 aa18.41■□□□□ 0.54
EXOSC1-202ENST00000370885 KIF21BO75037 1637 aa18.41■□□□□ 0.54
EXOSC1-202ENST00000370885 MAP3K4Q9Y6R4 1608 aa18.41■□□□□ 0.54
EXOSC1-202ENST00000370885 ARID3CA6NKF2 412 aa18.4■□□□□ 0.54
EXOSC1-202ENST00000370885 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
EXOSC1-202ENST00000370885 WDR7Q9Y4E6 1490 aa18.39■□□□□ 0.54
EXOSC1-202ENST00000370885 COL17A1Q9UMD9 1497 aaPredicted RBP18.39■□□□□ 0.53
EXOSC1-202ENST00000370885 ATP10BO94823 1461 aa18.38■□□□□ 0.53
EXOSC1-202ENST00000370885 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
EXOSC1-202ENST00000370885 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
EXOSC1-202ENST00000370885 KCNH8Q96L42 1107 aa18.34■□□□□ 0.53
EXOSC1-202ENST00000370885 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
EXOSC1-202ENST00000370885 NUP153P49790 1475 aaKnown RBP18.29■□□□□ 0.52
EXOSC1-202ENST00000370885 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
EXOSC1-202ENST00000370885 CD109Q6YHK3 1445 aa18.27■□□□□ 0.52
EXOSC1-202ENST00000370885 CFAP43Q8NDM7 1665 aa18.26■□□□□ 0.51
EXOSC1-202ENST00000370885 MAGI3Q5TCQ9 1506 aa18.25■□□□□ 0.51
EXOSC1-202ENST00000370885 TEX14Q8IWB6 1497 aa18.25■□□□□ 0.51
EXOSC1-202ENST00000370885 KDM4FA0A1W2PPD8 638 aa18.24■□□□□ 0.51
EXOSC1-202ENST00000370885 UBTFP17480 764 aaKnown RBP18.24■□□□□ 0.51
EXOSC1-202ENST00000370885 EFCAB5A4FU69 1503 aa18.23■□□□□ 0.51
EXOSC1-202ENST00000370885 ARHGAP35Q9NRY4 1499 aa18.2■□□□□ 0.5
EXOSC1-202ENST00000370885 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
EXOSC1-202ENST00000370885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.18■□□□□ 0.5
EXOSC1-202ENST00000370885 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
EXOSC1-202ENST00000370885 CDK13Q14004 1512 aaKnown RBP18.15■□□□□ 0.5
EXOSC1-202ENST00000370885 ARAP3Q8WWN8 1544 aa18.11■□□□□ 0.49
EXOSC1-202ENST00000370885 PLEKHD1A6NEE1 506 aa18.09■□□□□ 0.49
EXOSC1-202ENST00000370885 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.08■□□□□ 0.49
EXOSC1-202ENST00000370885 ADGRL1O94910 1474 aa18.08■□□□□ 0.49
EXOSC1-202ENST00000370885 LRRIQ1Q96JM4 1722 aa18.07■□□□□ 0.48
EXOSC1-202ENST00000370885 TTC37Q6PGP7 1564 aa18.07■□□□□ 0.48
EXOSC1-202ENST00000370885 FMN1Q68DA7 1419 aa18.06■□□□□ 0.48
EXOSC1-202ENST00000370885 RAPGEF3O95398 923 aa18.06■□□□□ 0.48
EXOSC1-202ENST00000370885 FRMPD1Q5SYB0 1578 aa18.04■□□□□ 0.48
EXOSC1-202ENST00000370885 NEO1Q92859 1461 aa18.04■□□□□ 0.48
EXOSC1-202ENST00000370885 ATP1B4Q9UN42 357 aaPredicted RBP18.04■□□□□ 0.48
EXOSC1-202ENST00000370885 HECW1Q76N89 1606 aa18.03■□□□□ 0.48
EXOSC1-202ENST00000370885 PHLDB1Q86UU1 1377 aa18.01■□□□□ 0.47
EXOSC1-202ENST00000370885 KIF14Q15058 1648 aa17.98■□□□□ 0.47
EXOSC1-202ENST00000370885 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
EXOSC1-202ENST00000370885 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
EXOSC1-202ENST00000370885 FANCAO15360 1455 aa17.97■□□□□ 0.47
EXOSC1-202ENST00000370885 RICTORQ6R327 1708 aa17.95■□□□□ 0.46
EXOSC1-202ENST00000370885 CASKIN1Q8WXD9 1431 aa17.95■□□□□ 0.46
EXOSC1-202ENST00000370885 PLCH2O75038 1416 aa17.94■□□□□ 0.46
EXOSC1-202ENST00000370885 CLIP1P30622 1438 aa17.93■□□□□ 0.46
EXOSC1-202ENST00000370885 TROQ12816 1431 aaPredicted RBP17.93■□□□□ 0.46
EXOSC1-202ENST00000370885 DENND4BO75064 1496 aaPredicted RBP17.92■□□□□ 0.46
EXOSC1-202ENST00000370885 CFAP74Q9C0B2 1584 aa17.89■□□□□ 0.45
EXOSC1-202ENST00000370885 CDK11AQ9UQ88 783 aaPredicted RBP17.88■□□□□ 0.45
EXOSC1-202ENST00000370885 SIGLEC1Q9BZZ2 1709 aa17.88■□□□□ 0.45
EXOSC1-202ENST00000370885 MYO5CQ9NQX4 1742 aa17.88■□□□□ 0.45
EXOSC1-202ENST00000370885 SCAPERQ9BY12 1400 aa17.87■□□□□ 0.45
EXOSC1-202ENST00000370885 YEATS2Q9ULM3 1422 aa17.86■□□□□ 0.45
EXOSC1-202ENST00000370885 FYCO1Q9BQS8 1478 aa17.86■□□□□ 0.45
EXOSC1-202ENST00000370885 ARHGEF40Q8TER5 1519 aa17.86■□□□□ 0.45
EXOSC1-202ENST00000370885 ADAMTSL3P82987 1691 aa17.86■□□□□ 0.45
EXOSC1-202ENST00000370885 CCDC18Q5T9S5 1454 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms