RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 FAM69CQ0P6D2 419 aa25.76■■□□□ 1.71
LMO4-201ENST00000370542 IGF1RP08069 1367 aa25.76■■□□□ 1.71
LMO4-201ENST00000370542 ABCC10Q5T3U5 1492 aa25.75■■□□□ 1.71
LMO4-201ENST00000370542 KIF27Q86VH2 1401 aa25.72■■□□□ 1.71
LMO4-201ENST00000370542 JPH4Q96JJ6 628 aa25.72■■□□□ 1.71
LMO4-201ENST00000370542 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
LMO4-201ENST00000370542 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
LMO4-201ENST00000370542 CUL7Q14999 1698 aa25.64■■□□□ 1.69
LMO4-201ENST00000370542 KDM6BO15054 1643 aa25.63■■□□□ 1.69
LMO4-201ENST00000370542 KIAA0586Q9BVV6 1533 aa25.62■■□□□ 1.69
LMO4-201ENST00000370542 MAPKBP1O60336 1514 aa25.6■■□□□ 1.69
LMO4-201ENST00000370542 DIP2BQ9P265 1576 aa25.59■■□□□ 1.69
LMO4-201ENST00000370542 CARMIL1Q5VZK9 1371 aa25.55■■□□□ 1.68
LMO4-201ENST00000370542 NPM1P06748 294 aaKnown RBP eCLIP25.54■■□□□ 1.68
LMO4-201ENST00000370542 ADGRL1O94910 1474 aa25.44■■□□□ 1.66
LMO4-201ENST00000370542 HECW2Q9P2P5 1572 aa25.44■■□□□ 1.66
LMO4-201ENST00000370542 ADCY10Q96PN6 1610 aa25.39■■□□□ 1.66
LMO4-201ENST00000370542 FBXO41Q8TF61 875 aa25.34■■□□□ 1.65
LMO4-201ENST00000370542 IQGAP2Q13576 1575 aa25.33■■□□□ 1.65
LMO4-201ENST00000370542 TSPOAP1O95153 1857 aa25.32■■□□□ 1.64
LMO4-201ENST00000370542 RAPGEF2Q9Y4G8 1499 aa25.32■■□□□ 1.64
LMO4-201ENST00000370542 PTPRGP23470 1445 aa25.31■■□□□ 1.64
LMO4-201ENST00000370542 CARMIL2Q6F5E8 1435 aa25.3■■□□□ 1.64
LMO4-201ENST00000370542 TNIKQ9UKE5 1360 aa25.3■■□□□ 1.64
LMO4-201ENST00000370542 DISP1Q96F81 1524 aa25.26■■□□□ 1.63
LMO4-201ENST00000370542 UGGT2Q9NYU1 1516 aa25.23■■□□□ 1.63
LMO4-201ENST00000370542 UHRF1BP1LA0JNW5 1464 aa25.21■■□□□ 1.63
LMO4-201ENST00000370542 ABCC2Q92887 1545 aa25.19■■□□□ 1.62
LMO4-201ENST00000370542 COL17A1Q9UMD9 1497 aaPredicted RBP25.18■■□□□ 1.62
LMO4-201ENST00000370542 PPRC1Q5VV67 1664 aaKnown RBP25.15■■□□□ 1.62
LMO4-201ENST00000370542 PRXQ9BXM0 1461 aa25.15■■□□□ 1.62
LMO4-201ENST00000370542 UACAQ9BZF9 1416 aa25.14■■□□□ 1.62
LMO4-201ENST00000370542 GLI2P10070 1586 aa25.13■■□□□ 1.61
LMO4-201ENST00000370542 KIAA0556O60303 1618 aa25.11■■□□□ 1.61
LMO4-201ENST00000370542 KDM5BQ9UGL1 1544 aa25.08■■□□□ 1.61
LMO4-201ENST00000370542 PLB1Q6P1J6 1458 aa25.08■■□□□ 1.6
LMO4-201ENST00000370542 ASXL2Q76L83 1435 aa25.06■■□□□ 1.6
LMO4-201ENST00000370542 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
LMO4-201ENST00000370542 TTBK1Q5TCY1 1321 aaPredicted RBP25.06■■□□□ 1.6
LMO4-201ENST00000370542 CTTNBP2Q8WZ74 1663 aa25.05■■□□□ 1.6
LMO4-201ENST00000370542 GOLGA3Q08378 1498 aa24.99■■□□□ 1.59
LMO4-201ENST00000370542 LMTK3Q96Q04 1460 aa24.95■■□□□ 1.58
LMO4-201ENST00000370542 ZCCHC11Q5TAX3 1644 aaKnown RBP24.94■■□□□ 1.58
LMO4-201ENST00000370542 EPRSP07814 1512 aaKnown RBP24.94■■□□□ 1.58
LMO4-201ENST00000370542 TEX14Q8IWB6 1497 aa24.93■■□□□ 1.58
LMO4-201ENST00000370542 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
LMO4-201ENST00000370542 MAP3K4Q9Y6R4 1608 aa24.91■■□□□ 1.58
LMO4-201ENST00000370542 ABCA8O94911 1581 aa24.91■■□□□ 1.58
LMO4-201ENST00000370542 EEA1Q15075 1411 aa24.86■■□□□ 1.57
LMO4-201ENST00000370542 WDR7Q9Y4E6 1490 aa24.84■■□□□ 1.57
LMO4-201ENST00000370542 SOCS7O14512 581 aa24.78■■□□□ 1.56
LMO4-201ENST00000370542 SAMD9Q5K651 1589 aa24.78■■□□□ 1.56
LMO4-201ENST00000370542 ILDR2Q71H61 639 aa24.74■■□□□ 1.55
LMO4-201ENST00000370542 MAGI3Q5TCQ9 1506 aa24.71■■□□□ 1.55
LMO4-201ENST00000370542 ATP10BO94823 1461 aa24.7■■□□□ 1.55
LMO4-201ENST00000370542 CFAP43Q8NDM7 1665 aa24.69■■□□□ 1.54
LMO4-201ENST00000370542 P3H3Q8IVL6 736 aa24.68■■□□□ 1.54
LMO4-201ENST00000370542 PTPRMP28827 1452 aa24.68■■□□□ 1.54
LMO4-201ENST00000370542 CD109Q6YHK3 1445 aa24.68■■□□□ 1.54
LMO4-201ENST00000370542 FAM9AQ8IZU1 332 aaPredicted RBP24.67■■□□□ 1.54
LMO4-201ENST00000370542 KCNH8Q96L42 1107 aa24.63■■□□□ 1.53
LMO4-201ENST00000370542 KIF21BO75037 1637 aa24.63■■□□□ 1.53
LMO4-201ENST00000370542 RAPGEF6Q8TEU7 1601 aa24.61■■□□□ 1.53
LMO4-201ENST00000370542 PCF11O94913 1555 aaKnown RBP24.59■■□□□ 1.53
LMO4-201ENST00000370542 DISP3Q9P2K9 1392 aa24.58■■□□□ 1.53
LMO4-201ENST00000370542 ADAMTSL3P82987 1691 aa24.58■■□□□ 1.53
LMO4-201ENST00000370542 NUP153P49790 1475 aaKnown RBP24.56■■□□□ 1.52
LMO4-201ENST00000370542 ABCA9Q8IUA7 1624 aa24.55■■□□□ 1.52
LMO4-201ENST00000370542 CERKQ8TCT0 537 aa24.55■■□□□ 1.52
LMO4-201ENST00000370542 FHOD3Q2V2M9 1422 aa24.54■■□□□ 1.52
LMO4-201ENST00000370542 EFCAB5A4FU69 1503 aa24.54■■□□□ 1.52
LMO4-201ENST00000370542 ARAP3Q8WWN8 1544 aa24.52■■□□□ 1.52
LMO4-201ENST00000370542 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
LMO4-201ENST00000370542 PHLDB1Q86UU1 1377 aa24.51■■□□□ 1.51
LMO4-201ENST00000370542 RANGAP1P46060 587 aaPredicted RBP24.43■■□□□ 1.5
LMO4-201ENST00000370542 NEO1Q92859 1461 aa24.42■■□□□ 1.5
LMO4-201ENST00000370542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.39■■□□□ 1.49
LMO4-201ENST00000370542 HSPA2P54652 639 aa24.39■■□□□ 1.49
LMO4-201ENST00000370542 HNRNPUL2Q1KMD3 747 aaKnown RBP24.39■■□□□ 1.49
LMO4-201ENST00000370542 PLEKHD1A6NEE1 506 aa24.38■■□□□ 1.49
LMO4-201ENST00000370542 BCORL1Q5H9F3 1711 aa24.37■■□□□ 1.49
LMO4-201ENST00000370542 MADDQ8WXG6 1647 aa24.36■■□□□ 1.49
LMO4-201ENST00000370542 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
LMO4-201ENST00000370542 ARHGAP35Q9NRY4 1499 aa24.33■■□□□ 1.49
LMO4-201ENST00000370542 RAPGEF3O95398 923 aa24.31■■□□□ 1.48
LMO4-201ENST00000370542 FMN1Q68DA7 1419 aa24.31■■□□□ 1.48
LMO4-201ENST00000370542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.48
LMO4-201ENST00000370542 ARID4BQ4LE39 1312 aaPredicted RBP24.28■■□□□ 1.48
LMO4-201ENST00000370542 FRMPD1Q5SYB0 1578 aa24.28■■□□□ 1.48
LMO4-201ENST00000370542 CDK13Q14004 1512 aaKnown RBP24.26■■□□□ 1.47
LMO4-201ENST00000370542 SPATA31D1Q6ZQQ2 1576 aa24.26■■□□□ 1.47
LMO4-201ENST00000370542 AKNAQ7Z591 1439 aa24.24■■□□□ 1.47
LMO4-201ENST00000370542 TTC37Q6PGP7 1564 aa24.24■■□□□ 1.47
LMO4-201ENST00000370542 HECW1Q76N89 1606 aa24.22■■□□□ 1.47
LMO4-201ENST00000370542 FANCAO15360 1455 aa24.22■■□□□ 1.47
LMO4-201ENST00000370542 RIMS1Q86UR5 1692 aaKnown RBP24.21■■□□□ 1.47
LMO4-201ENST00000370542 CFAP74Q9C0B2 1584 aa24.2■■□□□ 1.47
LMO4-201ENST00000370542 DENND4BO75064 1496 aaPredicted RBP24.2■■□□□ 1.47
LMO4-201ENST00000370542 EHMT2Q96KQ7 1210 aa24.2■■□□□ 1.46
LMO4-201ENST00000370542 RICTORQ6R327 1708 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms