RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 JPH4Q96JJ6 628 aa28.02■■■□□ 2.08
VMA21-202ENST00000370361 PRG4Q92954 1404 aaPredicted RBP28.01■■■□□ 2.08
VMA21-202ENST00000370361 KIAA0586Q9BVV6 1533 aa27.96■■■□□ 2.07
VMA21-202ENST00000370361 CARMIL1Q5VZK9 1371 aa27.87■■■□□ 2.05
VMA21-202ENST00000370361 NPM1P06748 294 aaKnown RBP eCLIP27.74■■■□□ 2.03
VMA21-202ENST00000370361 MAPKBP1O60336 1514 aa27.72■■■□□ 2.03
VMA21-202ENST00000370361 CARMIL2Q6F5E8 1435 aa27.71■■■□□ 2.03
VMA21-202ENST00000370361 IQGAP2Q13576 1575 aa27.7■■■□□ 2.03
VMA21-202ENST00000370361 ADCY10Q96PN6 1610 aa27.67■■■□□ 2.02
VMA21-202ENST00000370361 RAPGEF2Q9Y4G8 1499 aa27.67■■■□□ 2.02
VMA21-202ENST00000370361 KIF13AQ9H1H9 1805 aa27.65■■■□□ 2.02
VMA21-202ENST00000370361 TNIKQ9UKE5 1360 aa27.63■■■□□ 2.01
VMA21-202ENST00000370361 PTPRGP23470 1445 aa27.63■■■□□ 2.01
VMA21-202ENST00000370361 ABCC10Q5T3U5 1492 aa27.63■■■□□ 2.01
VMA21-202ENST00000370361 UGGT2Q9NYU1 1516 aa27.55■■■□□ 2
VMA21-202ENST00000370361 DIP2BQ9P265 1576 aa27.53■■■□□ 2
VMA21-202ENST00000370361 FAM69CQ0P6D2 419 aa27.52■■■□□ 2
VMA21-202ENST00000370361 UHRF1BP1LA0JNW5 1464 aa27.51■■□□□ 1.99
VMA21-202ENST00000370361 ABCC2Q92887 1545 aa27.5■■□□□ 1.99
VMA21-202ENST00000370361 DISP1Q96F81 1524 aa27.5■■□□□ 1.99
VMA21-202ENST00000370361 UACAQ9BZF9 1416 aa27.44■■□□□ 1.98
VMA21-202ENST00000370361 CTTNBP2Q8WZ74 1663 aa27.44■■□□□ 1.98
VMA21-202ENST00000370361 KIAA0556O60303 1618 aa27.42■■□□□ 1.98
VMA21-202ENST00000370361 PLB1Q6P1J6 1458 aa27.42■■□□□ 1.98
VMA21-202ENST00000370361 PRXQ9BXM0 1461 aa27.41■■□□□ 1.98
VMA21-202ENST00000370361 GOLGA3Q08378 1498 aa27.39■■□□□ 1.98
VMA21-202ENST00000370361 TTBK1Q5TCY1 1321 aaPredicted RBP27.36■■□□□ 1.97
VMA21-202ENST00000370361 KDM5BQ9UGL1 1544 aa27.34■■□□□ 1.97
VMA21-202ENST00000370361 ASXL2Q76L83 1435 aa27.33■■□□□ 1.97
VMA21-202ENST00000370361 GLI2P10070 1586 aa27.33■■□□□ 1.97
VMA21-202ENST00000370361 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
VMA21-202ENST00000370361 EEA1Q15075 1411 aa27.27■■□□□ 1.96
VMA21-202ENST00000370361 KDM6BO15054 1643 aa27.27■■□□□ 1.96
VMA21-202ENST00000370361 TSPOAP1O95153 1857 aa27.23■■□□□ 1.95
VMA21-202ENST00000370361 ZCCHC11Q5TAX3 1644 aaKnown RBP27.23■■□□□ 1.95
VMA21-202ENST00000370361 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
VMA21-202ENST00000370361 CSRNP3Q8WYN3 585 aa27.2■■□□□ 1.94
VMA21-202ENST00000370361 EPRSP07814 1512 aaKnown RBP27.19■■□□□ 1.94
VMA21-202ENST00000370361 ABCA8O94911 1581 aa27.17■■□□□ 1.94
VMA21-202ENST00000370361 WDR7Q9Y4E6 1490 aa27.14■■□□□ 1.94
VMA21-202ENST00000370361 TEX14Q8IWB6 1497 aa27.13■■□□□ 1.93
VMA21-202ENST00000370361 MAP3K4Q9Y6R4 1608 aa27.13■■□□□ 1.93
VMA21-202ENST00000370361 PPRC1Q5VV67 1664 aaKnown RBP27.12■■□□□ 1.93
VMA21-202ENST00000370361 SAMD9Q5K651 1589 aa27.05■■□□□ 1.92
VMA21-202ENST00000370361 CFAP43Q8NDM7 1665 aa27■■□□□ 1.91
VMA21-202ENST00000370361 MAGI3Q5TCQ9 1506 aa26.97■■□□□ 1.91
VMA21-202ENST00000370361 KIF21BO75037 1637 aa26.96■■□□□ 1.91
VMA21-202ENST00000370361 CD109Q6YHK3 1445 aa26.93■■□□□ 1.9
VMA21-202ENST00000370361 RAPGEF6Q8TEU7 1601 aa26.91■■□□□ 1.9
VMA21-202ENST00000370361 ATP10BO94823 1461 aa26.9■■□□□ 1.9
VMA21-202ENST00000370361 P3H3Q8IVL6 736 aa26.89■■□□□ 1.9
VMA21-202ENST00000370361 EFCAB5A4FU69 1503 aa26.89■■□□□ 1.89
VMA21-202ENST00000370361 COL17A1Q9UMD9 1497 aaPredicted RBP26.87■■□□□ 1.89
VMA21-202ENST00000370361 KCNH8Q96L42 1107 aa26.86■■□□□ 1.89
VMA21-202ENST00000370361 PHLDB1Q86UU1 1377 aa26.82■■□□□ 1.88
VMA21-202ENST00000370361 KDM4FA0A1W2PPD8 638 aa26.81■■□□□ 1.88
VMA21-202ENST00000370361 ABCA9Q8IUA7 1624 aa26.8■■□□□ 1.88
VMA21-202ENST00000370361 FHOD3Q2V2M9 1422 aa26.78■■□□□ 1.88
VMA21-202ENST00000370361 NUP153P49790 1475 aaKnown RBP26.78■■□□□ 1.88
VMA21-202ENST00000370361 ARAP3Q8WWN8 1544 aa26.75■■□□□ 1.87
VMA21-202ENST00000370361 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
VMA21-202ENST00000370361 ARID3CA6NKF2 412 aa26.72■■□□□ 1.87
VMA21-202ENST00000370361 ADGRL1O94910 1474 aa26.71■■□□□ 1.87
VMA21-202ENST00000370361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.71■■□□□ 1.87
VMA21-202ENST00000370361 HNRNPUL2Q1KMD3 747 aaKnown RBP26.71■■□□□ 1.87
VMA21-202ENST00000370361 NEO1Q92859 1461 aa26.69■■□□□ 1.86
VMA21-202ENST00000370361 RANGAP1P46060 587 aaPredicted RBP26.68■■□□□ 1.86
VMA21-202ENST00000370361 PLEKHD1A6NEE1 506 aa26.66■■□□□ 1.86
VMA21-202ENST00000370361 UBTFP17480 764 aaKnown RBP26.65■■□□□ 1.86
VMA21-202ENST00000370361 FMN1Q68DA7 1419 aa26.64■■□□□ 1.85
VMA21-202ENST00000370361 CFAP74Q9C0B2 1584 aa26.58■■□□□ 1.85
VMA21-202ENST00000370361 HECW1Q76N89 1606 aa26.55■■□□□ 1.84
VMA21-202ENST00000370361 ARHGAP35Q9NRY4 1499 aa26.54■■□□□ 1.84
VMA21-202ENST00000370361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.5■■□□□ 1.83
VMA21-202ENST00000370361 CDK11AQ9UQ88 783 aaPredicted RBP26.49■■□□□ 1.83
VMA21-202ENST00000370361 FANCAO15360 1455 aa26.48■■□□□ 1.83
VMA21-202ENST00000370361 CDK13Q14004 1512 aaKnown RBP26.47■■□□□ 1.83
VMA21-202ENST00000370361 DENND4BO75064 1496 aaPredicted RBP26.45■■□□□ 1.82
VMA21-202ENST00000370361 AKNAQ7Z591 1439 aa26.45■■□□□ 1.82
VMA21-202ENST00000370361 FRMPD1Q5SYB0 1578 aa26.45■■□□□ 1.82
VMA21-202ENST00000370361 RAPGEF3O95398 923 aa26.44■■□□□ 1.82
VMA21-202ENST00000370361 TTC37Q6PGP7 1564 aa26.44■■□□□ 1.82
VMA21-202ENST00000370361 EHMT2Q96KQ7 1210 aa26.41■■□□□ 1.82
VMA21-202ENST00000370361 RICTORQ6R327 1708 aa26.39■■□□□ 1.82
VMA21-202ENST00000370361 PLCH2O75038 1416 aa26.39■■□□□ 1.81
VMA21-202ENST00000370361 ARHGEF40Q8TER5 1519 aa26.38■■□□□ 1.81
VMA21-202ENST00000370361 ATP1B4Q9UN42 357 aaPredicted RBP26.37■■□□□ 1.81
VMA21-202ENST00000370361 ZMYM4Q5VZL5 1548 aa26.37■■□□□ 1.81
VMA21-202ENST00000370361 CLIP1P30622 1438 aa26.37■■□□□ 1.81
VMA21-202ENST00000370361 MAGI2Q86UL8 1455 aa26.36■■□□□ 1.81
VMA21-202ENST00000370361 KIF14Q15058 1648 aa26.36■■□□□ 1.81
VMA21-202ENST00000370361 TROQ12816 1431 aaPredicted RBP26.35■■□□□ 1.81
VMA21-202ENST00000370361 CCDC18Q5T9S5 1454 aa26.34■■□□□ 1.81
VMA21-202ENST00000370361 MYO5CQ9NQX4 1742 aa26.34■■□□□ 1.81
VMA21-202ENST00000370361 ADAMTSL3P82987 1691 aa26.33■■□□□ 1.81
VMA21-202ENST00000370361 CASKIN1Q8WXD9 1431 aa26.31■■□□□ 1.8
VMA21-202ENST00000370361 BCORL1Q5H9F3 1711 aa26.29■■□□□ 1.8
VMA21-202ENST00000370361 EFCAB2Q5VUJ9 269 aa26.29■■□□□ 1.8
VMA21-202ENST00000370361 HECW2Q9P2P5 1572 aa26.29■■□□□ 1.8
VMA21-202ENST00000370361 POGZQ7Z3K3 1410 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms