RNA–Protein interactions for RNA: ENST00000368984.7

HTRA1-201, Transcript of HtrA serine peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA1, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1-201ENST00000368984 FHAD1B1AJZ9 1412 aa37.28■■■■□ 3.56
HTRA1-201ENST00000368984 HNRNPUL2Q1KMD3 747 aaKnown RBP37.27■■■■□ 3.56
HTRA1-201ENST00000368984 MAP3K1Q13233 1512 aa37.27■■■■□ 3.56
HTRA1-201ENST00000368984 P3H3Q8IVL6 736 aa37.25■■■■□ 3.55
HTRA1-201ENST00000368984 AQRO60306 1485 aaKnown RBP eCLIP37.25■■■■□ 3.55
HTRA1-201ENST00000368984 PBRM1Q86U86 1689 aa37.24■■■■□ 3.55
HTRA1-201ENST00000368984 FHOD3Q2V2M9 1422 aa37.22■■■■□ 3.55
HTRA1-201ENST00000368984 TIAM1Q13009 1591 aa37.21■■■■□ 3.55
HTRA1-201ENST00000368984 IFT140Q96RY7 1462 aa37.2■■■■□ 3.55
HTRA1-201ENST00000368984 PCF11O94913 1555 aaKnown RBP37.16■■■■□ 3.54
HTRA1-201ENST00000368984 ERCC6Q03468 1493 aa37.15■■■■□ 3.54
HTRA1-201ENST00000368984 RRBP1Q9P2E9 1410 aaKnown RBP37.14■■■■□ 3.54
HTRA1-201ENST00000368984 GRIN2BQ13224 1484 aa37.12■■■■□ 3.53
HTRA1-201ENST00000368984 ZNF608Q9ULD9 1512 aaPredicted RBP37.11■■■■□ 3.53
HTRA1-201ENST00000368984 ADAMTS12P58397 1594 aa37.09■■■■□ 3.53
HTRA1-201ENST00000368984 SAMD9Q5K651 1589 aa37.08■■■■□ 3.53
HTRA1-201ENST00000368984 LRRC9Q6ZRR7 1453 aa37.07■■■■□ 3.52
HTRA1-201ENST00000368984 FYCO1Q9BQS8 1478 aa37.06■■■■□ 3.52
HTRA1-201ENST00000368984 CASKIN1Q8WXD9 1431 aa37.05■■■■□ 3.52
HTRA1-201ENST00000368984 THOC2Q8NI27 1593 aaKnown RBP37.04■■■■□ 3.52
HTRA1-201ENST00000368984 CFAP43Q8NDM7 1665 aa37.04■■■■□ 3.52
HTRA1-201ENST00000368984 FMN1Q68DA7 1419 aa37.02■■■■□ 3.52
HTRA1-201ENST00000368984 CCNB3Q8WWL7 1395 aa36.97■■■■□ 3.51
HTRA1-201ENST00000368984 SNAPC4Q5SXM2 1469 aa36.94■■■■□ 3.5
HTRA1-201ENST00000368984 ATP1B4Q9UN42 357 aaPredicted RBP36.94■■■■□ 3.5
HTRA1-201ENST00000368984 EIF4G3O43432 1585 aaKnown RBP36.9■■■■□ 3.5
HTRA1-201ENST00000368984 IQGAP2Q13576 1575 aa36.87■■■■□ 3.49
HTRA1-201ENST00000368984 PHLDB1Q86UU1 1377 aa36.84■■■■□ 3.49
HTRA1-201ENST00000368984 LRRIQ1Q96JM4 1722 aa36.72■■■■□ 3.47
HTRA1-201ENST00000368984 GRIN2AQ12879 1464 aa36.71■■■■□ 3.47
HTRA1-201ENST00000368984 UGGT2Q9NYU1 1516 aa36.7■■■■□ 3.47
HTRA1-201ENST00000368984 MAGI1Q96QZ7 1491 aaPredicted RBP36.69■■■■□ 3.46
HTRA1-201ENST00000368984 KIAA0586Q9BVV6 1533 aa36.68■■■■□ 3.46
HTRA1-201ENST00000368984 ITGAEP38570 1179 aa36.63■■■■□ 3.45
HTRA1-201ENST00000368984 DHX57Q6P158 1386 aaKnown RBP36.61■■■■□ 3.45
HTRA1-201ENST00000368984 MTUS2Q5JR59 1369 aa36.59■■■■□ 3.45
HTRA1-201ENST00000368984 SYNJ2O15056 1496 aa36.58■■■■□ 3.45
HTRA1-201ENST00000368984 FAM50AQ14320 339 aaKnown RBP36.53■■■■□ 3.44
HTRA1-201ENST00000368984 CLSPNQ9HAW4 1339 aa36.53■■■■□ 3.44
HTRA1-201ENST00000368984 CHMP7Q8WUX9 453 aaPredicted RBP36.53■■■■□ 3.44
HTRA1-201ENST00000368984 DISP1Q96F81 1524 aa36.52■■■■□ 3.44
HTRA1-201ENST00000368984 CCDC18Q5T9S5 1454 aa36.52■■■■□ 3.44
HTRA1-201ENST00000368984 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.51■■■■□ 3.44
HTRA1-201ENST00000368984 HECW1Q76N89 1606 aa36.51■■■■□ 3.44
HTRA1-201ENST00000368984 KIAA0556O60303 1618 aa36.49■■■■□ 3.43
HTRA1-201ENST00000368984 CEP170Q5SW79 1584 aa36.47■■■■□ 3.43
HTRA1-201ENST00000368984 EHBP1L1Q8N3D4 1523 aa36.47■■■■□ 3.43
HTRA1-201ENST00000368984 FGD6Q6ZV73 1430 aa36.46■■■■□ 3.43
HTRA1-201ENST00000368984 NCOA2Q15596 1464 aa36.44■■■■□ 3.42
HTRA1-201ENST00000368984 MAGI3Q5TCQ9 1506 aa36.44■■■■□ 3.42
HTRA1-201ENST00000368984 EPRSP07814 1512 aaKnown RBP36.43■■■■□ 3.42
HTRA1-201ENST00000368984 RAB3GAP2Q9H2M9 1393 aa36.43■■■■□ 3.42
HTRA1-201ENST00000368984 SUPT6HQ7KZ85 1726 aaKnown RBP36.41■■■■□ 3.42
HTRA1-201ENST00000368984 FBLN2P98095 1184 aa36.39■■■■□ 3.42
HTRA1-201ENST00000368984 NUP160Q12769 1436 aa36.39■■■■□ 3.42
HTRA1-201ENST00000368984 SETD5Q9C0A6 1442 aa36.39■■■■□ 3.42
HTRA1-201ENST00000368984 ARHGEF11O15085 1522 aa36.36■■■■□ 3.41
HTRA1-201ENST00000368984 MYOM3Q5VTT5 1437 aa36.35■■■■□ 3.41
HTRA1-201ENST00000368984 CDK13Q14004 1512 aaKnown RBP36.33■■■■□ 3.41
HTRA1-201ENST00000368984 JPH4Q96JJ6 628 aa36.23■■■■□ 3.39
HTRA1-201ENST00000368984 NUP153P49790 1475 aaKnown RBP36.23■■■■□ 3.39
HTRA1-201ENST00000368984 RAPGEF6Q8TEU7 1601 aa36.23■■■■□ 3.39
HTRA1-201ENST00000368984 ZNF316A6NFI3 1004 aaPredicted RBP36.22■■■■□ 3.39
HTRA1-201ENST00000368984 ARID3CA6NKF2 412 aa36.2■■■■□ 3.39
HTRA1-201ENST00000368984 PTPRKQ15262 1439 aa36.17■■■■□ 3.38
HTRA1-201ENST00000368984 PTPN23Q9H3S7 1636 aa36.17■■■■□ 3.38
HTRA1-201ENST00000368984 CARMIL2Q6F5E8 1435 aa36.16■■■■□ 3.38
HTRA1-201ENST00000368984 MAPKBP1O60336 1514 aa36.15■■■■□ 3.38
HTRA1-201ENST00000368984 DIEXFQ68CQ4 756 aaKnown RBP36.12■■■■□ 3.37
HTRA1-201ENST00000368984 TCOF1Q13428 1488 aaKnown RBP36.11■■■■□ 3.37
HTRA1-201ENST00000368984 PLB1Q6P1J6 1458 aa36.08■■■■□ 3.37
HTRA1-201ENST00000368984 HFM1A2PYH4 1435 aa36.05■■■■□ 3.36
HTRA1-201ENST00000368984 MIA2Q96PC5 1412 aa36.05■■■■□ 3.36
HTRA1-201ENST00000368984 CDK11AQ9UQ88 783 aaPredicted RBP36■■■■□ 3.35
HTRA1-201ENST00000368984 NAIPQ13075 1403 aa35.96■■■■□ 3.35
HTRA1-201ENST00000368984 CHD1O14646 1710 aa35.95■■■■□ 3.35
HTRA1-201ENST00000368984 TROQ12816 1431 aaPredicted RBP35.91■■■■□ 3.34
HTRA1-201ENST00000368984 ABCA8O94911 1581 aa35.91■■■■□ 3.34
HTRA1-201ENST00000368984 PRG4Q92954 1404 aaPredicted RBP35.9■■■■□ 3.34
HTRA1-201ENST00000368984 UACAQ9BZF9 1416 aa35.83■■■■□ 3.33
HTRA1-201ENST00000368984 AKNAQ7Z591 1439 aa35.8■■■■□ 3.32
HTRA1-201ENST00000368984 SIN3AQ96ST3 1273 aa35.8■■■■□ 3.32
HTRA1-201ENST00000368984 CHIC2Q9UKJ5 165 aa35.8■■■■□ 3.32
HTRA1-201ENST00000368984 ADCY10Q96PN6 1610 aa35.79■■■■□ 3.32
HTRA1-201ENST00000368984 RRP7BPQ9NSQ0 103 aa35.77■■■■□ 3.32
HTRA1-201ENST00000368984 ATP10BO94823 1461 aa35.77■■■■□ 3.32
HTRA1-201ENST00000368984 GCC2Q8IWJ2 1684 aa35.77■■■■□ 3.32
HTRA1-201ENST00000368984 PTPRGP23470 1445 aa35.76■■■■□ 3.31
HTRA1-201ENST00000368984 SHROOM2Q13796 1616 aa35.75■■■■□ 3.31
HTRA1-201ENST00000368984 KIF14Q15058 1648 aa35.75■■■■□ 3.31
HTRA1-201ENST00000368984 ZNF644Q9H582 1327 aaPredicted RBP35.73■■■■□ 3.31
HTRA1-201ENST00000368984 DAPK1P53355 1430 aa35.72■■■■□ 3.31
HTRA1-201ENST00000368984 NEUROD1Q13562 356 aa35.71■■■■□ 3.31
HTRA1-201ENST00000368984 GPATCH8Q9UKJ3 1502 aaKnown RBP35.71■■■■□ 3.31
HTRA1-201ENST00000368984 DNMT1P26358 1616 aaKnown RBP35.7■■■■□ 3.31
HTRA1-201ENST00000368984 ABCC5O15440 1437 aa35.69■■■■□ 3.3
HTRA1-201ENST00000368984 TIMELESSQ9UNS1 1208 aa35.69■■■■□ 3.3
HTRA1-201ENST00000368984 ITSN2Q9NZM3 1697 aa35.68■■■■□ 3.3
HTRA1-201ENST00000368984 PLEKHD1A6NEE1 506 aa35.68■■■■□ 3.3
HTRA1-201ENST00000368984 CFDP1Q9UEE9 299 aaPredicted RBP35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms