RNA–Protein interactions for RNA: ENST00000368881.8

PSMD4-201, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5 BASIC

Gene PSMD4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-201ENST00000368881 ARHGAP35Q9NRY4 1499 aa27.85■■■□□ 2.05
PSMD4-201ENST00000368881 GRIN2AQ12879 1464 aa27.83■■■□□ 2.05
PSMD4-201ENST00000368881 ARAP1Q96P48 1450 aa27.82■■■□□ 2.04
PSMD4-201ENST00000368881 IQGAP2Q13576 1575 aa27.77■■■□□ 2.04
PSMD4-201ENST00000368881 RANGAP1P46060 587 aaPredicted RBP27.74■■■□□ 2.03
PSMD4-201ENST00000368881 SAMD9Q5K651 1589 aa27.72■■■□□ 2.03
PSMD4-201ENST00000368881 KIAA0586Q9BVV6 1533 aa27.72■■■□□ 2.03
PSMD4-201ENST00000368881 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
PSMD4-201ENST00000368881 UGGT2Q9NYU1 1516 aa27.66■■■□□ 2.02
PSMD4-201ENST00000368881 APLP2Q06481 763 aa27.66■■■□□ 2.02
PSMD4-201ENST00000368881 NUP160Q12769 1436 aa27.65■■■□□ 2.02
PSMD4-201ENST00000368881 TRIM26Q12899 539 aaPredicted RBP27.63■■■□□ 2.01
PSMD4-201ENST00000368881 FMN1Q68DA7 1419 aa27.61■■■□□ 2.01
PSMD4-201ENST00000368881 CEP170Q5SW79 1584 aa27.61■■■□□ 2.01
PSMD4-201ENST00000368881 MAP3K1Q13233 1512 aa27.56■■■□□ 2
PSMD4-201ENST00000368881 FHOD3Q2V2M9 1422 aa27.54■■■□□ 2
PSMD4-201ENST00000368881 FBLN2P98095 1184 aa27.54■■■□□ 2
PSMD4-201ENST00000368881 CHD1O14646 1710 aa27.54■■■□□ 2
PSMD4-201ENST00000368881 FYCO1Q9BQS8 1478 aa27.53■■■□□ 2
PSMD4-201ENST00000368881 CASKIN1Q8WXD9 1431 aa27.49■■□□□ 1.99
PSMD4-201ENST00000368881 KIAA0556O60303 1618 aa27.47■■□□□ 1.99
PSMD4-201ENST00000368881 PCF11O94913 1555 aaKnown RBP27.47■■□□□ 1.99
PSMD4-201ENST00000368881 P3H3Q8IVL6 736 aa27.43■■□□□ 1.98
PSMD4-201ENST00000368881 CARMIL2Q6F5E8 1435 aa27.43■■□□□ 1.98
PSMD4-201ENST00000368881 DISP1Q96F81 1524 aa27.41■■□□□ 1.98
PSMD4-201ENST00000368881 CFAP43Q8NDM7 1665 aa27.41■■□□□ 1.98
PSMD4-201ENST00000368881 TIAM1Q13009 1591 aa27.4■■□□□ 1.98
PSMD4-201ENST00000368881 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
PSMD4-201ENST00000368881 JPH4Q96JJ6 628 aa27.36■■□□□ 1.97
PSMD4-201ENST00000368881 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
PSMD4-201ENST00000368881 PPARGC1BQ86YN6 1023 aaKnown RBP27.32■■□□□ 1.96
PSMD4-201ENST00000368881 CCDC18Q5T9S5 1454 aa27.32■■□□□ 1.96
PSMD4-201ENST00000368881 SHROOM2Q13796 1616 aa27.31■■□□□ 1.96
PSMD4-201ENST00000368881 CLASP1Q7Z460 1538 aa27.27■■□□□ 1.96
PSMD4-201ENST00000368881 LRRC9Q6ZRR7 1453 aa27.26■■□□□ 1.95
PSMD4-201ENST00000368881 RAPGEF6Q8TEU7 1601 aa27.22■■□□□ 1.95
PSMD4-201ENST00000368881 PRG4Q92954 1404 aaPredicted RBP27.2■■□□□ 1.94
PSMD4-201ENST00000368881 ATP1B4Q9UN42 357 aaPredicted RBP27.19■■□□□ 1.94
PSMD4-201ENST00000368881 KANK4Q5T7N3 995 aaPredicted RBP27.17■■□□□ 1.94
PSMD4-201ENST00000368881 LRRIQ1Q96JM4 1722 aa27.16■■□□□ 1.94
PSMD4-201ENST00000368881 TTBK1Q5TCY1 1321 aaPredicted RBP27.15■■□□□ 1.94
PSMD4-201ENST00000368881 EPRSP07814 1512 aaKnown RBP27.14■■□□□ 1.93
PSMD4-201ENST00000368881 EHBP1L1Q8N3D4 1523 aa27.14■■□□□ 1.93
PSMD4-201ENST00000368881 MTUS2Q5JR59 1369 aa27.1■■□□□ 1.93
PSMD4-201ENST00000368881 ABCA8O94911 1581 aa27.08■■□□□ 1.93
PSMD4-201ENST00000368881 RRBP1Q9P2E9 1410 aaKnown RBP27.07■■□□□ 1.92
PSMD4-201ENST00000368881 NUP153P49790 1475 aaKnown RBP27.06■■□□□ 1.92
PSMD4-201ENST00000368881 PTPRGP23470 1445 aa27.05■■□□□ 1.92
PSMD4-201ENST00000368881 SUPT6HQ7KZ85 1726 aaKnown RBP27.05■■□□□ 1.92
PSMD4-201ENST00000368881 CDK11AQ9UQ88 783 aaPredicted RBP27.01■■□□□ 1.91
PSMD4-201ENST00000368881 PLB1Q6P1J6 1458 aa27.01■■□□□ 1.91
PSMD4-201ENST00000368881 CDK13Q14004 1512 aaKnown RBP26.98■■□□□ 1.91
PSMD4-201ENST00000368881 OSCARQ8IYS5 282 aa26.98■■□□□ 1.91
PSMD4-201ENST00000368881 CCNB3Q8WWL7 1395 aa26.96■■□□□ 1.91
PSMD4-201ENST00000368881 UACAQ9BZF9 1416 aa26.93■■□□□ 1.9
PSMD4-201ENST00000368881 ARHGEF11O15085 1522 aa26.92■■□□□ 1.9
PSMD4-201ENST00000368881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.91■■□□□ 1.9
PSMD4-201ENST00000368881 NCOA2Q15596 1464 aa26.91■■□□□ 1.9
PSMD4-201ENST00000368881 MAGI3Q5TCQ9 1506 aa26.9■■□□□ 1.9
PSMD4-201ENST00000368881 PHLDB1Q86UU1 1377 aa26.9■■□□□ 1.9
PSMD4-201ENST00000368881 ERCC6L2Q5T890 1561 aa26.9■■□□□ 1.9
PSMD4-201ENST00000368881 ABCC2Q92887 1545 aa26.88■■□□□ 1.89
PSMD4-201ENST00000368881 UHRF1BP1LA0JNW5 1464 aa26.87■■□□□ 1.89
PSMD4-201ENST00000368881 TROQ12816 1431 aaPredicted RBP26.86■■□□□ 1.89
PSMD4-201ENST00000368881 ADCY10Q96PN6 1610 aa26.86■■□□□ 1.89
PSMD4-201ENST00000368881 MYOM3Q5VTT5 1437 aa26.85■■□□□ 1.89
PSMD4-201ENST00000368881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.83■■□□□ 1.89
PSMD4-201ENST00000368881 HNRNPUL2Q1KMD3 747 aaKnown RBP26.83■■□□□ 1.89
PSMD4-201ENST00000368881 ATP10BO94823 1461 aa26.83■■□□□ 1.88
PSMD4-201ENST00000368881 FGD6Q6ZV73 1430 aa26.82■■□□□ 1.88
PSMD4-201ENST00000368881 MIA2Q96PC5 1412 aa26.78■■□□□ 1.88
PSMD4-201ENST00000368881 PLEKHD1A6NEE1 506 aa26.77■■□□□ 1.88
PSMD4-201ENST00000368881 KIF14Q15058 1648 aa26.75■■□□□ 1.87
PSMD4-201ENST00000368881 ITSN2Q9NZM3 1697 aa26.74■■□□□ 1.87
PSMD4-201ENST00000368881 ARID3CA6NKF2 412 aa26.73■■□□□ 1.87
PSMD4-201ENST00000368881 TCOF1Q13428 1488 aaKnown RBP26.71■■□□□ 1.87
PSMD4-201ENST00000368881 PTPN23Q9H3S7 1636 aa26.7■■□□□ 1.87
PSMD4-201ENST00000368881 KDM5BQ9UGL1 1544 aa26.7■■□□□ 1.87
PSMD4-201ENST00000368881 FAM50AQ14320 339 aaKnown RBP26.66■■□□□ 1.86
PSMD4-201ENST00000368881 ZCCHC11Q5TAX3 1644 aaKnown RBP26.66■■□□□ 1.86
PSMD4-201ENST00000368881 HRCP23327 699 aa26.65■■□□□ 1.86
PSMD4-201ENST00000368881 ZEB1P37275 1124 aaPredicted RBP26.63■■□□□ 1.85
PSMD4-201ENST00000368881 ABCC10Q5T3U5 1492 aa26.59■■□□□ 1.85
PSMD4-201ENST00000368881 GPATCH8Q9UKJ3 1502 aaKnown RBP26.56■■□□□ 1.84
PSMD4-201ENST00000368881 CDC42BPAQ5VT25 1732 aa26.54■■□□□ 1.84
PSMD4-201ENST00000368881 PREX2Q70Z35 1606 aa26.49■■□□□ 1.83
PSMD4-201ENST00000368881 ITGAEP38570 1179 aa26.49■■□□□ 1.83
PSMD4-201ENST00000368881 CFDP1Q9UEE9 299 aaPredicted RBP26.49■■□□□ 1.83
PSMD4-201ENST00000368881 CCER1Q8TC90 406 aaPredicted RBP26.48■■□□□ 1.83
PSMD4-201ENST00000368881 DNMT1P26358 1616 aaKnown RBP26.47■■□□□ 1.83
PSMD4-201ENST00000368881 AKNAQ7Z591 1439 aa26.47■■□□□ 1.83
PSMD4-201ENST00000368881 SETD5Q9C0A6 1442 aa26.47■■□□□ 1.83
PSMD4-201ENST00000368881 CAMSAP2Q08AD1 1489 aa26.46■■□□□ 1.83
PSMD4-201ENST00000368881 WDR7Q9Y4E6 1490 aa26.45■■□□□ 1.82
PSMD4-201ENST00000368881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.44■■□□□ 1.82
PSMD4-201ENST00000368881 MYO5CQ9NQX4 1742 aa26.44■■□□□ 1.82
PSMD4-201ENST00000368881 NPM1P06748 294 aaKnown RBP eCLIP26.43■■□□□ 1.82
PSMD4-201ENST00000368881 HFM1A2PYH4 1435 aa26.41■■□□□ 1.82
PSMD4-201ENST00000368881 RIMBP3CA6NJZ7 1639 aa26.4■■□□□ 1.82
PSMD4-201ENST00000368881 RIMBP3BA6NNM3 1639 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms