RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 KIAA0586Q9BVV6 1533 aa31.14■■■□□ 2.58
CHTOP-202ENST00000368687 RAPGEF2Q9Y4G8 1499 aa31.14■■■□□ 2.57
CHTOP-202ENST00000368687 EEA1Q15075 1411 aa31.11■■■□□ 2.57
CHTOP-202ENST00000368687 JPH4Q96JJ6 628 aa31.06■■■□□ 2.56
CHTOP-202ENST00000368687 PRG4Q92954 1404 aaPredicted RBP31.01■■■□□ 2.55
CHTOP-202ENST00000368687 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
CHTOP-202ENST00000368687 PRXQ9BXM0 1461 aa31■■■□□ 2.55
CHTOP-202ENST00000368687 IQGAP2Q13576 1575 aa30.98■■■□□ 2.55
CHTOP-202ENST00000368687 TRHP20396 242 aaPredicted RBP30.93■■■□□ 2.54
CHTOP-202ENST00000368687 CSRNP3Q8WYN3 585 aa30.93■■■□□ 2.54
CHTOP-202ENST00000368687 CTTNBP2Q8WZ74 1663 aa30.9■■■□□ 2.54
CHTOP-202ENST00000368687 CARMIL2Q6F5E8 1435 aa30.85■■■□□ 2.53
CHTOP-202ENST00000368687 UGGT2Q9NYU1 1516 aa30.8■■■□□ 2.52
CHTOP-202ENST00000368687 KIF21BO75037 1637 aa30.73■■■□□ 2.51
CHTOP-202ENST00000368687 TNIKQ9UKE5 1360 aa30.7■■■□□ 2.51
CHTOP-202ENST00000368687 GOLGA3Q08378 1498 aa30.7■■■□□ 2.5
CHTOP-202ENST00000368687 DISP1Q96F81 1524 aa30.68■■■□□ 2.5
CHTOP-202ENST00000368687 FAM9AQ8IZU1 332 aaPredicted RBP30.67■■■□□ 2.5
CHTOP-202ENST00000368687 KIAA0556O60303 1618 aa30.66■■■□□ 2.5
CHTOP-202ENST00000368687 PTPRGP23470 1445 aa30.66■■■□□ 2.5
CHTOP-202ENST00000368687 ADCY10Q96PN6 1610 aa30.58■■■□□ 2.49
CHTOP-202ENST00000368687 NPM1P06748 294 aaKnown RBP eCLIP30.53■■■□□ 2.48
CHTOP-202ENST00000368687 UHRF1BP1LA0JNW5 1464 aa30.49■■■□□ 2.47
CHTOP-202ENST00000368687 TTBK1Q5TCY1 1321 aaPredicted RBP30.48■■■□□ 2.47
CHTOP-202ENST00000368687 UACAQ9BZF9 1416 aa30.47■■■□□ 2.47
CHTOP-202ENST00000368687 MAPKBP1O60336 1514 aa30.46■■■□□ 2.47
CHTOP-202ENST00000368687 SAMD9Q5K651 1589 aa30.45■■■□□ 2.47
CHTOP-202ENST00000368687 ABCC2Q92887 1545 aa30.44■■■□□ 2.46
CHTOP-202ENST00000368687 EFCAB5A4FU69 1503 aa30.39■■■□□ 2.46
CHTOP-202ENST00000368687 KIF13AQ9H1H9 1805 aa30.38■■■□□ 2.45
CHTOP-202ENST00000368687 UBTFP17480 764 aaKnown RBP30.37■■■□□ 2.45
CHTOP-202ENST00000368687 ABCC10Q5T3U5 1492 aa30.37■■■□□ 2.45
CHTOP-202ENST00000368687 FAM69CQ0P6D2 419 aa30.32■■■□□ 2.44
CHTOP-202ENST00000368687 ABCA8O94911 1581 aa30.32■■■□□ 2.44
CHTOP-202ENST00000368687 KDM5BQ9UGL1 1544 aa30.32■■■□□ 2.44
CHTOP-202ENST00000368687 DIP2BQ9P265 1576 aa30.3■■■□□ 2.44
CHTOP-202ENST00000368687 PLB1Q6P1J6 1458 aa30.29■■■□□ 2.44
CHTOP-202ENST00000368687 ZCCHC11Q5TAX3 1644 aaKnown RBP30.24■■■□□ 2.43
CHTOP-202ENST00000368687 P3H3Q8IVL6 736 aa30.23■■■□□ 2.43
CHTOP-202ENST00000368687 EHMT2Q96KQ7 1210 aa30.2■■■□□ 2.43
CHTOP-202ENST00000368687 ASXL2Q76L83 1435 aa30.2■■■□□ 2.42
CHTOP-202ENST00000368687 RANGAP1P46060 587 aaPredicted RBP30.19■■■□□ 2.42
CHTOP-202ENST00000368687 FHOD3Q2V2M9 1422 aa30.18■■■□□ 2.42
CHTOP-202ENST00000368687 RAPGEF6Q8TEU7 1601 aa30.18■■■□□ 2.42
CHTOP-202ENST00000368687 GLI2P10070 1586 aa30.1■■■□□ 2.41
CHTOP-202ENST00000368687 FMN1Q68DA7 1419 aa30.09■■■□□ 2.41
CHTOP-202ENST00000368687 ARHGAP35Q9NRY4 1499 aa30.09■■■□□ 2.41
CHTOP-202ENST00000368687 WDR7Q9Y4E6 1490 aa30.08■■■□□ 2.41
CHTOP-202ENST00000368687 EPRSP07814 1512 aaKnown RBP30.03■■■□□ 2.4
CHTOP-202ENST00000368687 ATP10BO94823 1461 aa30.02■■■□□ 2.4
CHTOP-202ENST00000368687 NUP153P49790 1475 aaKnown RBP30.01■■■□□ 2.4
CHTOP-202ENST00000368687 TSPOAP1O95153 1857 aa30.01■■■□□ 2.39
CHTOP-202ENST00000368687 HECW1Q76N89 1606 aa29.94■■■□□ 2.38
CHTOP-202ENST00000368687 CLIP1P30622 1438 aa29.94■■■□□ 2.38
CHTOP-202ENST00000368687 MAP3K4Q9Y6R4 1608 aa29.93■■■□□ 2.38
CHTOP-202ENST00000368687 PPRC1Q5VV67 1664 aaKnown RBP29.92■■■□□ 2.38
CHTOP-202ENST00000368687 KDM6BO15054 1643 aa29.9■■■□□ 2.38
CHTOP-202ENST00000368687 CFAP43Q8NDM7 1665 aa29.89■■■□□ 2.38
CHTOP-202ENST00000368687 ARID3CA6NKF2 412 aa29.88■■■□□ 2.37
CHTOP-202ENST00000368687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.88■■■□□ 2.37
CHTOP-202ENST00000368687 HNRNPUL2Q1KMD3 747 aaKnown RBP29.88■■■□□ 2.37
CHTOP-202ENST00000368687 TEX14Q8IWB6 1497 aa29.87■■■□□ 2.37
CHTOP-202ENST00000368687 PLEKHD1A6NEE1 506 aa29.81■■■□□ 2.36
CHTOP-202ENST00000368687 KCNH8Q96L42 1107 aa29.81■■■□□ 2.36
CHTOP-202ENST00000368687 CASKIN1Q8WXD9 1431 aa29.79■■■□□ 2.36
CHTOP-202ENST00000368687 CEP162Q5TB80 1403 aa29.79■■■□□ 2.36
CHTOP-202ENST00000368687 ABCA9Q8IUA7 1624 aa29.78■■■□□ 2.36
CHTOP-202ENST00000368687 CD109Q6YHK3 1445 aa29.78■■■□□ 2.36
CHTOP-202ENST00000368687 MAGI3Q5TCQ9 1506 aa29.77■■■□□ 2.36
CHTOP-202ENST00000368687 FYCO1Q9BQS8 1478 aa29.77■■■□□ 2.36
CHTOP-202ENST00000368687 CDK11AQ9UQ88 783 aaPredicted RBP29.76■■■□□ 2.35
CHTOP-202ENST00000368687 PCF11O94913 1555 aaKnown RBP29.76■■■□□ 2.35
CHTOP-202ENST00000368687 CDK13Q14004 1512 aaKnown RBP29.76■■■□□ 2.35
CHTOP-202ENST00000368687 CCDC18Q5T9S5 1454 aa29.75■■■□□ 2.35
CHTOP-202ENST00000368687 COL17A1Q9UMD9 1497 aaPredicted RBP29.74■■■□□ 2.35
CHTOP-202ENST00000368687 ATP1B4Q9UN42 357 aaPredicted RBP29.74■■■□□ 2.35
CHTOP-202ENST00000368687 LRRIQ1Q96JM4 1722 aa29.66■■■□□ 2.34
CHTOP-202ENST00000368687 AEBP2Q6ZN18 517 aaPredicted RBP29.65■■■□□ 2.34
CHTOP-202ENST00000368687 LOC105371045A0A1W2PR82 267 aa29.64■■■□□ 2.34
CHTOP-202ENST00000368687 PHLDB1Q86UU1 1377 aa29.63■■■□□ 2.33
CHTOP-202ENST00000368687 TROQ12816 1431 aaPredicted RBP29.61■■■□□ 2.33
CHTOP-202ENST00000368687 KIF14Q15058 1648 aa29.6■■■□□ 2.33
CHTOP-202ENST00000368687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.59■■■□□ 2.33
CHTOP-202ENST00000368687 NEO1Q92859 1461 aa29.56■■■□□ 2.32
CHTOP-202ENST00000368687 CFAP74Q9C0B2 1584 aa29.56■■■□□ 2.32
CHTOP-202ENST00000368687 TTC37Q6PGP7 1564 aa29.55■■■□□ 2.32
CHTOP-202ENST00000368687 ARAP3Q8WWN8 1544 aa29.51■■■□□ 2.32
CHTOP-202ENST00000368687 MYO5CQ9NQX4 1742 aa29.48■■■□□ 2.31
CHTOP-202ENST00000368687 KDM4FA0A1W2PPD8 638 aa29.48■■■□□ 2.31
CHTOP-202ENST00000368687 VPS8Q8N3P4 1428 aa29.46■■■□□ 2.31
CHTOP-202ENST00000368687 FANCAO15360 1455 aa29.45■■■□□ 2.31
CHTOP-202ENST00000368687 PLCH2O75038 1416 aa29.45■■■□□ 2.3
CHTOP-202ENST00000368687 AKNAQ7Z591 1439 aa29.37■■■□□ 2.29
CHTOP-202ENST00000368687 MTUS2Q5JR59 1369 aa29.37■■■□□ 2.29
CHTOP-202ENST00000368687 EHBP1L1Q8N3D4 1523 aa29.35■■■□□ 2.29
CHTOP-202ENST00000368687 EFCAB2Q5VUJ9 269 aa29.33■■■□□ 2.29
CHTOP-202ENST00000368687 ADGRL1O94910 1474 aa29.33■■■□□ 2.29
CHTOP-202ENST00000368687 PREX2Q70Z35 1606 aa29.33■■■□□ 2.29
CHTOP-202ENST00000368687 ARHGAP5Q13017 1502 aa29.32■■■□□ 2.28
CHTOP-202ENST00000368687 DENND4BO75064 1496 aaPredicted RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms