RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 CTTNBP2Q8WZ74 1663 aa27.11■■□□□ 1.93
LMNA-207ENST00000368301 PCF11O94913 1555 aaKnown RBP27.11■■□□□ 1.93
LMNA-207ENST00000368301 MAP3K1Q13233 1512 aa27.09■■□□□ 1.93
LMNA-207ENST00000368301 CCNB3Q8WWL7 1395 aa27.08■■□□□ 1.93
LMNA-207ENST00000368301 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
LMNA-207ENST00000368301 TARBP1Q13395 1621 aaKnown RBP27.07■■□□□ 1.92
LMNA-207ENST00000368301 LRRC9Q6ZRR7 1453 aa27.05■■□□□ 1.92
LMNA-207ENST00000368301 ATP1B4Q9UN42 357 aaPredicted RBP27.05■■□□□ 1.92
LMNA-207ENST00000368301 EFCAB5A4FU69 1503 aa27.04■■□□□ 1.92
LMNA-207ENST00000368301 ITGAEP38570 1179 aa27■■□□□ 1.91
LMNA-207ENST00000368301 CFAP43Q8NDM7 1665 aa27■■□□□ 1.91
LMNA-207ENST00000368301 DHX57Q6P158 1386 aaKnown RBP26.97■■□□□ 1.91
LMNA-207ENST00000368301 PHLDB1Q86UU1 1377 aa26.97■■□□□ 1.91
LMNA-207ENST00000368301 MRC2Q9UBG0 1479 aa26.95■■□□□ 1.9
LMNA-207ENST00000368301 DIEXFQ68CQ4 756 aaKnown RBP26.95■■□□□ 1.9
LMNA-207ENST00000368301 FYCO1Q9BQS8 1478 aa26.95■■□□□ 1.9
LMNA-207ENST00000368301 CASKIN1Q8WXD9 1431 aa26.94■■□□□ 1.9
LMNA-207ENST00000368301 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.92e-7■■■■■ 36.3
LMNA-207ENST00000368301 ZNF316A6NFI3 1004 aaPredicted RBP26.9■■□□□ 1.9
LMNA-207ENST00000368301 SAMD9Q5K651 1589 aa26.89■■□□□ 1.89
LMNA-207ENST00000368301 PBRM1Q86U86 1689 aa26.88■■□□□ 1.89
LMNA-207ENST00000368301 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
LMNA-207ENST00000368301 FMN1Q68DA7 1419 aa26.85■■□□□ 1.89
LMNA-207ENST00000368301 FAM50AQ14320 339 aaKnown RBP26.8■■□□□ 1.88
LMNA-207ENST00000368301 ZNF608Q9ULD9 1512 aaPredicted RBP26.79■■□□□ 1.88
LMNA-207ENST00000368301 CLSPNQ9HAW4 1339 aa26.79■■□□□ 1.88
LMNA-207ENST00000368301 ADAMTS12P58397 1594 aa26.78■■□□□ 1.88
LMNA-207ENST00000368301 LRRIQ1Q96JM4 1722 aa26.78■■□□□ 1.88
LMNA-207ENST00000368301 RAB3GAP2Q9H2M9 1393 aa26.77■■□□□ 1.88
LMNA-207ENST00000368301 WDR62O43379 1518 aa26.75■■□□□ 1.87
LMNA-207ENST00000368301 GRIN2BQ13224 1484 aa26.74■■□□□ 1.87
LMNA-207ENST00000368301 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
LMNA-207ENST00000368301 MTUS2Q5JR59 1369 aa26.67■■□□□ 1.86
LMNA-207ENST00000368301 SETD5Q9C0A6 1442 aa26.67■■□□□ 1.86
LMNA-207ENST00000368301 IQGAP2Q13576 1575 aa26.67■■□□□ 1.86
LMNA-207ENST00000368301 ERCC6Q03468 1493 aa26.63■■□□□ 1.85
LMNA-207ENST00000368301 FGD6Q6ZV73 1430 aa26.61■■□□□ 1.85
LMNA-207ENST00000368301 MAPKBP1O60336 1514 aa26.61■■□□□ 1.85
LMNA-207ENST00000368301 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
LMNA-207ENST00000368301 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
LMNA-207ENST00000368301 NCOA2Q15596 1464 aa26.57■■□□□ 1.84
LMNA-207ENST00000368301 MAGI3Q5TCQ9 1506 aa26.57■■□□□ 1.84
LMNA-207ENST00000368301 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.56■■□□□ 1.84
LMNA-207ENST00000368301 EHBP1L1Q8N3D4 1523 aa26.51■■□□□ 1.83
LMNA-207ENST00000368301 UGGT2Q9NYU1 1516 aa26.51■■□□□ 1.83
LMNA-207ENST00000368301 SUPT6HQ7KZ85 1726 aaKnown RBP26.5■■□□□ 1.83
LMNA-207ENST00000368301 PTPRKQ15262 1439 aa26.5■■□□□ 1.83
LMNA-207ENST00000368301 ARID3CA6NKF2 412 aa26.49■■□□□ 1.83
LMNA-207ENST00000368301 MYOM3Q5VTT5 1437 aa26.49■■□□□ 1.83
LMNA-207ENST00000368301 HECW1Q76N89 1606 aa26.48■■□□□ 1.83
LMNA-207ENST00000368301 SCAF1Q9H7N4 1312 aaKnown RBP26.48■■□□□ 1.83
LMNA-207ENST00000368301 CCDC18Q5T9S5 1454 aa26.48■■□□□ 1.83
LMNA-207ENST00000368301 MIER1Q8N108 512 aa26.47■■□□□ 1.83
LMNA-207ENST00000368301 GRIN2AQ12879 1464 aa26.47■■□□□ 1.83
LMNA-207ENST00000368301 CDK13Q14004 1512 aaKnown RBP26.47■■□□□ 1.83
LMNA-207ENST00000368301 EPRSP07814 1512 aaKnown RBP26.46■■□□□ 1.83
LMNA-207ENST00000368301 KIAA0586Q9BVV6 1533 aa26.45■■□□□ 1.83
LMNA-207ENST00000368301 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
LMNA-207ENST00000368301 DISP1Q96F81 1524 aa26.44■■□□□ 1.82
LMNA-207ENST00000368301 NEUROD1Q13562 356 aa26.43■■□□□ 1.82
LMNA-207ENST00000368301 SIN3AQ96ST3 1273 aa26.42■■□□□ 1.82
LMNA-207ENST00000368301 KIAA0556O60303 1618 aa26.4■■□□□ 1.82
LMNA-207ENST00000368301 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.81
LMNA-207ENST00000368301 PTPN23Q9H3S7 1636 aa26.38■■□□□ 1.81
LMNA-207ENST00000368301 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
LMNA-207ENST00000368301 CHMP7Q8WUX9 453 aaPredicted RBP26.34■■□□□ 1.81
LMNA-207ENST00000368301 HFM1A2PYH4 1435 aa26.34■■□□□ 1.81
LMNA-207ENST00000368301 CEP170Q5SW79 1584 aa26.34■■□□□ 1.81
LMNA-207ENST00000368301 FBLN2P98095 1184 aa26.33■■□□□ 1.81
LMNA-207ENST00000368301 SYNJ2O15056 1496 aa26.31■■□□□ 1.8
LMNA-207ENST00000368301 NAIPQ13075 1403 aa26.3■■□□□ 1.8
LMNA-207ENST00000368301 YTHDC1Q96MU7 727 aaKnown RBP26.28■■□□□ 1.8
LMNA-207ENST00000368301 NUP153P49790 1475 aaKnown RBP26.28■■□□□ 1.8
LMNA-207ENST00000368301 TCOF1Q13428 1488 aaKnown RBP26.27■■□□□ 1.8
LMNA-207ENST00000368301 CENPBP07199 599 aaPredicted RBP26.26■■□□□ 1.79
LMNA-207ENST00000368301 CHIC2Q9UKJ5 165 aa26.25■■□□□ 1.79
LMNA-207ENST00000368301 RAPGEF6Q8TEU7 1601 aa26.24■■□□□ 1.79
LMNA-207ENST00000368301 RRP7BPQ9NSQ0 103 aa26.22■■□□□ 1.79
LMNA-207ENST00000368301 UACAQ9BZF9 1416 aa26.21■■□□□ 1.79
LMNA-207ENST00000368301 NUP160Q12769 1436 aa26.19■■□□□ 1.78
LMNA-207ENST00000368301 MIA2Q96PC5 1412 aa26.18■■□□□ 1.78
LMNA-207ENST00000368301 PLB1Q6P1J6 1458 aa26.17■■□□□ 1.78
LMNA-207ENST00000368301 JPH4Q96JJ6 628 aa26.15■■□□□ 1.78
LMNA-207ENST00000368301 KDM6BO15054 1643 aa26.13■■□□□ 1.77
LMNA-207ENST00000368301 PRG4Q92954 1404 aaPredicted RBP26.11■■□□□ 1.77
LMNA-207ENST00000368301 ZNF644Q9H582 1327 aaPredicted RBP26.1■■□□□ 1.77
LMNA-207ENST00000368301 GCC2Q8IWJ2 1684 aa26.1■■□□□ 1.77
LMNA-207ENST00000368301 TIMELESSQ9UNS1 1208 aa26.1■■□□□ 1.77
LMNA-207ENST00000368301 PPP1R15AO75807 674 aaPredicted RBP26.09■■□□□ 1.77
LMNA-207ENST00000368301 GTF3C3Q9Y5Q9 886 aa26.07■■□□□ 1.76
LMNA-207ENST00000368301 CARMIL2Q6F5E8 1435 aa26.07■■□□□ 1.76
LMNA-207ENST00000368301 CDK11AQ9UQ88 783 aaPredicted RBP26.06■■□□□ 1.76
LMNA-207ENST00000368301 AKNAQ7Z591 1439 aa26.04■■□□□ 1.76
LMNA-207ENST00000368301 TROQ12816 1431 aaPredicted RBP26.04■■□□□ 1.76
LMNA-207ENST00000368301 DENND4BO75064 1496 aaPredicted RBP26.04■■□□□ 1.76
LMNA-207ENST00000368301 DAPK1P53355 1430 aa26.03■■□□□ 1.76
LMNA-207ENST00000368301 TONSLQ96HA7 1378 aa26.02■■□□□ 1.76
LMNA-207ENST00000368301 ABCC5O15440 1437 aa26.01■■□□□ 1.75
LMNA-207ENST00000368301 TRIM52Q96A61 297 aa26.01■■□□□ 1.75
LMNA-207ENST00000368301 HIRIP3Q9BW71 556 aaPredicted RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms