RNA–Protein interactions for RNA: ENST00000368259.6

CCT3-204, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2 BASIC

Gene CCT3, Length 1,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-204ENST00000368259 MSH5O43196 834 aa18.45■□□□□ 0.54
CCT3-204ENST00000368259 TOP2BQ02880 1626 aa18.44■□□□□ 0.54
CCT3-204ENST00000368259 NESP48681 1621 aa18.43■□□□□ 0.54
CCT3-204ENST00000368259 PRXQ9BXM0 1461 aa18.43■□□□□ 0.54
CCT3-204ENST00000368259 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
CCT3-204ENST00000368259 PPP1R15AO75807 674 aaPredicted RBP18.42■□□□□ 0.54
CCT3-204ENST00000368259 BCANQ96GW7 911 aa18.41■□□□□ 0.54
CCT3-204ENST00000368259 CDK11AQ9UQ88 783 aaPredicted RBP18.41■□□□□ 0.54
CCT3-204ENST00000368259 WDR97A6NE52 1622 aa18.35■□□□□ 0.53
CCT3-204ENST00000368259 LAMC3Q9Y6N6 1575 aa18.35■□□□□ 0.53
CCT3-204ENST00000368259 KCNH8Q96L42 1107 aa18.34■□□□□ 0.53
CCT3-204ENST00000368259 ANP32CO43423 234 aa18.33■□□□□ 0.53
CCT3-204ENST00000368259 RAB3GAP2Q9H2M9 1393 aa18.33■□□□□ 0.52
CCT3-204ENST00000368259 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
CCT3-204ENST00000368259 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
CCT3-204ENST00000368259 DEKP35659 375 aaKnown RBP18.26■□□□□ 0.51
CCT3-204ENST00000368259 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
CCT3-204ENST00000368259 DDX10Q13206 875 aaKnown RBP18.25■□□□□ 0.51
CCT3-204ENST00000368259 TIAM1Q13009 1591 aa18.24■□□□□ 0.51
CCT3-204ENST00000368259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCT3-204ENST00000368259 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
CCT3-204ENST00000368259 KANK4Q5T7N3 995 aaPredicted RBP18.23■□□□□ 0.51
CCT3-204ENST00000368259 PPP4R2Q9NY27 417 aa18.23■□□□□ 0.51
CCT3-204ENST00000368259 ARHGAP35Q9NRY4 1499 aa18.18■□□□□ 0.5
CCT3-204ENST00000368259 ITGAEP38570 1179 aa18.17■□□□□ 0.5
CCT3-204ENST00000368259 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
CCT3-204ENST00000368259 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
CCT3-204ENST00000368259 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
CCT3-204ENST00000368259 NOP58Q9Y2X3 529 aaKnown RBP18.13■□□□□ 0.49
CCT3-204ENST00000368259 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
CCT3-204ENST00000368259 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
CCT3-204ENST00000368259 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
CCT3-204ENST00000368259 WDR62O43379 1518 aa18.08■□□□□ 0.49
CCT3-204ENST00000368259 CFTRP13569 1480 aa18.08■□□□□ 0.48
CCT3-204ENST00000368259 NCOA2Q15596 1464 aa18.05■□□□□ 0.48
CCT3-204ENST00000368259 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
CCT3-204ENST00000368259 HNRNPUQ00839 825 aaKnown RBP eCLIP18.01■□□□□ 0.47
CCT3-204ENST00000368259 TONSLQ96HA7 1378 aa18■□□□□ 0.47
CCT3-204ENST00000368259 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
CCT3-204ENST00000368259 USP35Q9P2H5 1018 aa17.98■□□□□ 0.47
CCT3-204ENST00000368259 UACAQ9BZF9 1416 aa17.98■□□□□ 0.47
CCT3-204ENST00000368259 RTL5Q5HYW3 569 aaPredicted RBP17.98■□□□□ 0.47
CCT3-204ENST00000368259 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
CCT3-204ENST00000368259 PHLDB1Q86UU1 1377 aa17.96■□□□□ 0.47
CCT3-204ENST00000368259 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.465e-8■■■■■ 30.7
CCT3-204ENST00000368259 IPO9Q96P70 1041 aaKnown RBP17.95■□□□□ 0.46
CCT3-204ENST00000368259 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
CCT3-204ENST00000368259 ANP32AP39687 249 aaKnown RBP17.94■□□□□ 0.46
CCT3-204ENST00000368259 KDM5BQ9UGL1 1544 aa17.94■□□□□ 0.46
CCT3-204ENST00000368259 CNTLNQ9NXG0 1405 aa17.93■□□□□ 0.46
CCT3-204ENST00000368259 ABCA5Q8WWZ7 1642 aa17.93■□□□□ 0.46
CCT3-204ENST00000368259 CUX1P39880 1505 aa17.93■□□□□ 0.46
CCT3-204ENST00000368259 POLR1AO95602 1720 aaPredicted RBP17.92■□□□□ 0.46
CCT3-204ENST00000368259 WASHC2AQ641Q2 1341 aa17.92■□□□□ 0.46
CCT3-204ENST00000368259 HFM1A2PYH4 1435 aa17.92■□□□□ 0.46
CCT3-204ENST00000368259 C11orf95C9JLR9 678 aaPredicted RBP17.92■□□□□ 0.46
CCT3-204ENST00000368259 FYCO1Q9BQS8 1478 aa17.91■□□□□ 0.46
CCT3-204ENST00000368259 RNF123Q5XPI4 1314 aa17.89■□□□□ 0.45
CCT3-204ENST00000368259 CCDC18Q5T9S5 1454 aa17.89■□□□□ 0.45
CCT3-204ENST00000368259 EFCAB5A4FU69 1503 aa17.89■□□□□ 0.45
CCT3-204ENST00000368259 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
CCT3-204ENST00000368259 PTPN23Q9H3S7 1636 aa17.88■□□□□ 0.45
CCT3-204ENST00000368259 UBE2Q2Q8WVN8 375 aa17.87■□□□□ 0.45
CCT3-204ENST00000368259 PCF11O94913 1555 aaKnown RBP17.86■□□□□ 0.45
CCT3-204ENST00000368259 ANO8Q9HCE9 1232 aaPredicted RBP17.85■□□□□ 0.45
CCT3-204ENST00000368259 ZBTB47Q9UFB7 747 aaPredicted RBP17.85■□□□□ 0.45
CCT3-204ENST00000368259 RANGAP1P46060 587 aaPredicted RBP17.84■□□□□ 0.45
CCT3-204ENST00000368259 HECW1Q76N89 1606 aa17.83■□□□□ 0.45
CCT3-204ENST00000368259 RIMBP3CA6NJZ7 1639 aa17.83■□□□□ 0.44
CCT3-204ENST00000368259 RIMBP3BA6NNM3 1639 aa17.83■□□□□ 0.44
CCT3-204ENST00000368259 RIMBP3Q9UFD9 1639 aa17.83■□□□□ 0.44
CCT3-204ENST00000368259 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
CCT3-204ENST00000368259 PAK3O75914 559 aaPredicted RBP17.82■□□□□ 0.44
CCT3-204ENST00000368259 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
CCT3-204ENST00000368259 NCOA1Q15788 1441 aa17.8■□□□□ 0.44
CCT3-204ENST00000368259 FGD6Q6ZV73 1430 aa17.8■□□□□ 0.44
CCT3-204ENST00000368259 CASKIN1Q8WXD9 1431 aa17.8■□□□□ 0.44
CCT3-204ENST00000368259 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
CCT3-204ENST00000368259 NBR1Q14596 966 aa17.79■□□□□ 0.44
CCT3-204ENST00000368259 AKNAQ7Z591 1439 aa17.78■□□□□ 0.44
CCT3-204ENST00000368259 B4GALNT3Q6L9W6 998 aa17.78■□□□□ 0.44
CCT3-204ENST00000368259 FGD5Q6ZNL6 1462 aa17.77■□□□□ 0.44
CCT3-204ENST00000368259 GCC2Q8IWJ2 1684 aa17.76■□□□□ 0.43
CCT3-204ENST00000368259 PPM1GO15355 546 aaPredicted RBP17.76■□□□□ 0.43
CCT3-204ENST00000368259 FMN1Q68DA7 1419 aa17.76■□□□□ 0.43
CCT3-204ENST00000368259 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
CCT3-204ENST00000368259 PRKRIP1Q9H875 184 aaPredicted RBP17.75■□□□□ 0.43
CCT3-204ENST00000368259 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
CCT3-204ENST00000368259 DNMBPQ6XZF7 1577 aa17.75■□□□□ 0.43
CCT3-204ENST00000368259 CCDC136Q96JN2 1154 aa17.74■□□□□ 0.43
CCT3-204ENST00000368259 IGF1RP08069 1367 aa17.72■□□□□ 0.43
CCT3-204ENST00000368259 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.43
CCT3-204ENST00000368259 NAIPQ13075 1403 aa17.72■□□□□ 0.43
CCT3-204ENST00000368259 CCDC7Q96M83 1385 aa17.71■□□□□ 0.43
CCT3-204ENST00000368259 HIRIP3Q9BW71 556 aaPredicted RBP17.7■□□□□ 0.42
CCT3-204ENST00000368259 ARHGEF11O15085 1522 aa17.7■□□□□ 0.42
CCT3-204ENST00000368259 NUDCQ9Y266 331 aa17.7■□□□□ 0.42
CCT3-204ENST00000368259 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
CCT3-204ENST00000368259 MS4A1P11836 297 aa17.69■□□□□ 0.42
CCT3-204ENST00000368259 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms