RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MAPKBP1O60336 1514 aa27.24■■□□□ 1.95
VAMP4-202ENST00000367740 PRG4Q92954 1404 aaPredicted RBP27.23■■□□□ 1.95
VAMP4-202ENST00000367740 FAM69CQ0P6D2 419 aa27.22■■□□□ 1.95
VAMP4-202ENST00000367740 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.94
VAMP4-202ENST00000367740 ERICH3Q5RHP9 1530 aa27.16■■□□□ 1.94
VAMP4-202ENST00000367740 ADCY10Q96PN6 1610 aa27.15■■□□□ 1.94
VAMP4-202ENST00000367740 TSPOAP1O95153 1857 aa27.13■■□□□ 1.93
VAMP4-202ENST00000367740 RUSC2Q8N2Y8 1516 aa27.12■■□□□ 1.93
VAMP4-202ENST00000367740 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
VAMP4-202ENST00000367740 JPH4Q96JJ6 628 aa27.07■■□□□ 1.92
VAMP4-202ENST00000367740 TOP2BQ02880 1626 aa27.07■■□□□ 1.92
VAMP4-202ENST00000367740 NPM1P06748 294 aaKnown RBP eCLIP27.03■■□□□ 1.92
VAMP4-202ENST00000367740 PHF23Q9BUL5 403 aaPredicted RBP26.93■■□□□ 1.9
VAMP4-202ENST00000367740 ADGRL1O94910 1474 aa26.92■■□□□ 1.9
VAMP4-202ENST00000367740 PPRC1Q5VV67 1664 aaKnown RBP26.89■■□□□ 1.9
VAMP4-202ENST00000367740 HECW2Q9P2P5 1572 aa26.87■■□□□ 1.89
VAMP4-202ENST00000367740 KIAA0586Q9BVV6 1533 aa26.77■■□□□ 1.88
VAMP4-202ENST00000367740 GLI2P10070 1586 aa26.75■■□□□ 1.87
VAMP4-202ENST00000367740 ABCC2Q92887 1545 aa26.7■■□□□ 1.87
VAMP4-202ENST00000367740 ASXL2Q76L83 1435 aa26.68■■□□□ 1.86
VAMP4-202ENST00000367740 COL17A1Q9UMD9 1497 aaPredicted RBP26.68■■□□□ 1.86
VAMP4-202ENST00000367740 CUL7Q14999 1698 aa26.67■■□□□ 1.86
VAMP4-202ENST00000367740 PLB1Q6P1J6 1458 aa26.65■■□□□ 1.86
VAMP4-202ENST00000367740 PTPRGP23470 1445 aa26.65■■□□□ 1.86
VAMP4-202ENST00000367740 MAP3K4Q9Y6R4 1608 aa26.63■■□□□ 1.85
VAMP4-202ENST00000367740 TNIKQ9UKE5 1360 aa26.55■■□□□ 1.84
VAMP4-202ENST00000367740 UHRF1BP1LA0JNW5 1464 aa26.55■■□□□ 1.84
VAMP4-202ENST00000367740 TTBK1Q5TCY1 1321 aaPredicted RBP26.54■■□□□ 1.84
VAMP4-202ENST00000367740 EPRSP07814 1512 aaKnown RBP26.54■■□□□ 1.84
VAMP4-202ENST00000367740 IGF1RP08069 1367 aa26.52■■□□□ 1.84
VAMP4-202ENST00000367740 TEX14Q8IWB6 1497 aa26.51■■□□□ 1.83
VAMP4-202ENST00000367740 CARMIL2Q6F5E8 1435 aa26.49■■□□□ 1.83
VAMP4-202ENST00000367740 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
VAMP4-202ENST00000367740 FBXO41Q8TF61 875 aa26.46■■□□□ 1.83
VAMP4-202ENST00000367740 ZCCHC11Q5TAX3 1644 aaKnown RBP26.45■■□□□ 1.82
VAMP4-202ENST00000367740 UACAQ9BZF9 1416 aa26.45■■□□□ 1.82
VAMP4-202ENST00000367740 KDM5BQ9UGL1 1544 aa26.44■■□□□ 1.82
VAMP4-202ENST00000367740 IQGAP2Q13576 1575 aa26.44■■□□□ 1.82
VAMP4-202ENST00000367740 KIF27Q86VH2 1401 aa26.42■■□□□ 1.82
VAMP4-202ENST00000367740 DISP1Q96F81 1524 aa26.39■■□□□ 1.81
VAMP4-202ENST00000367740 KIF21BO75037 1637 aa26.34■■□□□ 1.81
VAMP4-202ENST00000367740 CARMIL1Q5VZK9 1371 aa26.32■■□□□ 1.8
VAMP4-202ENST00000367740 WDR7Q9Y4E6 1490 aa26.3■■□□□ 1.8
VAMP4-202ENST00000367740 CFAP43Q8NDM7 1665 aa26.28■■□□□ 1.8
VAMP4-202ENST00000367740 MAGI3Q5TCQ9 1506 aa26.24■■□□□ 1.79
VAMP4-202ENST00000367740 KIAA0556O60303 1618 aa26.24■■□□□ 1.79
VAMP4-202ENST00000367740 UGGT2Q9NYU1 1516 aa26.24■■□□□ 1.79
VAMP4-202ENST00000367740 CD109Q6YHK3 1445 aa26.18■■□□□ 1.78
VAMP4-202ENST00000367740 ADAMTSL3P82987 1691 aa26.15■■□□□ 1.78
VAMP4-202ENST00000367740 PTPRMP28827 1452 aa26.13■■□□□ 1.77
VAMP4-202ENST00000367740 PCF11O94913 1555 aaKnown RBP26.07■■□□□ 1.76
VAMP4-202ENST00000367740 ARAP3Q8WWN8 1544 aa26.07■■□□□ 1.76
VAMP4-202ENST00000367740 LMTK3Q96Q04 1460 aa26.05■■□□□ 1.76
VAMP4-202ENST00000367740 ABCA8O94911 1581 aa26.04■■□□□ 1.76
VAMP4-202ENST00000367740 BCORL1Q5H9F3 1711 aa26.01■■□□□ 1.75
VAMP4-202ENST00000367740 KCNH8Q96L42 1107 aa26.01■■□□□ 1.75
VAMP4-202ENST00000367740 RAPGEF2Q9Y4G8 1499 aa26.01■■□□□ 1.75
VAMP4-202ENST00000367740 MADDQ8WXG6 1647 aa26■■□□□ 1.75
VAMP4-202ENST00000367740 CTTNBP2Q8WZ74 1663 aa25.99■■□□□ 1.75
VAMP4-202ENST00000367740 FRMPD1Q5SYB0 1578 aa25.9■■□□□ 1.74
VAMP4-202ENST00000367740 ABCA9Q8IUA7 1624 aa25.89■■□□□ 1.74
VAMP4-202ENST00000367740 RIMS1Q86UR5 1692 aaKnown RBP25.88■■□□□ 1.73
VAMP4-202ENST00000367740 GOLGA3Q08378 1498 aa25.88■■□□□ 1.73
VAMP4-202ENST00000367740 PHLDB1Q86UU1 1377 aa25.83■■□□□ 1.73
VAMP4-202ENST00000367740 RAPGEF3O95398 923 aa25.81■■□□□ 1.72
VAMP4-202ENST00000367740 ARHGEF40Q8TER5 1519 aa25.79■■□□□ 1.72
VAMP4-202ENST00000367740 NEO1Q92859 1461 aa25.79■■□□□ 1.72
VAMP4-202ENST00000367740 ILDR2Q71H61 639 aa25.78■■□□□ 1.72
VAMP4-202ENST00000367740 HSPA2P54652 639 aa25.76■■□□□ 1.71
VAMP4-202ENST00000367740 CERKQ8TCT0 537 aa25.76■■□□□ 1.71
VAMP4-202ENST00000367740 ATP10BO94823 1461 aa25.76■■□□□ 1.71
VAMP4-202ENST00000367740 ARID4BQ4LE39 1312 aaPredicted RBP25.75■■□□□ 1.71
VAMP4-202ENST00000367740 SOCS7O14512 581 aa25.74■■□□□ 1.71
VAMP4-202ENST00000367740 DISP3Q9P2K9 1392 aa25.71■■□□□ 1.71
VAMP4-202ENST00000367740 ARID3CA6NKF2 412 aa25.71■■□□□ 1.71
VAMP4-202ENST00000367740 RICTORQ6R327 1708 aa25.71■■□□□ 1.71
VAMP4-202ENST00000367740 SIGLEC1Q9BZZ2 1709 aa25.69■■□□□ 1.7
VAMP4-202ENST00000367740 FOXD1Q16676 465 aa25.68■■□□□ 1.7
VAMP4-202ENST00000367740 POTEDQ86YR6 584 aa25.65■■□□□ 1.7
VAMP4-202ENST00000367740 FER1L4A9Z1Z3 1794 aa25.61■■□□□ 1.69
VAMP4-202ENST00000367740 SPATA31D1Q6ZQQ2 1576 aa25.61■■□□□ 1.69
VAMP4-202ENST00000367740 FANCAO15360 1455 aa25.6■■□□□ 1.69
VAMP4-202ENST00000367740 RAPGEF6Q8TEU7 1601 aa25.59■■□□□ 1.69
VAMP4-202ENST00000367740 TTC37Q6PGP7 1564 aa25.59■■□□□ 1.69
VAMP4-202ENST00000367740 PLPPR3Q6T4P5 718 aa25.58■■□□□ 1.69
VAMP4-202ENST00000367740 DENND4BO75064 1496 aaPredicted RBP25.58■■□□□ 1.69
VAMP4-202ENST00000367740 ZMYM4Q5VZL5 1548 aa25.58■■□□□ 1.68
VAMP4-202ENST00000367740 POGZQ7Z3K3 1410 aa25.56■■□□□ 1.68
VAMP4-202ENST00000367740 FHOD3Q2V2M9 1422 aa25.55■■□□□ 1.68
VAMP4-202ENST00000367740 PREX1Q8TCU6 1659 aa25.55■■□□□ 1.68
VAMP4-202ENST00000367740 PRXQ9BXM0 1461 aa25.54■■□□□ 1.68
VAMP4-202ENST00000367740 CFAP74Q9C0B2 1584 aa25.54■■□□□ 1.68
VAMP4-202ENST00000367740 AKNAQ7Z591 1439 aa25.54■■□□□ 1.68
VAMP4-202ENST00000367740 ZFYVE16Q7Z3T8 1539 aa25.53■■□□□ 1.68
VAMP4-202ENST00000367740 SAMD9Q5K651 1589 aa25.53■■□□□ 1.68
VAMP4-202ENST00000367740 EFCAB5A4FU69 1503 aa25.52■■□□□ 1.68
VAMP4-202ENST00000367740 P3H3Q8IVL6 736 aa25.51■■□□□ 1.67
VAMP4-202ENST00000367740 YEATS2Q9ULM3 1422 aa25.51■■□□□ 1.67
VAMP4-202ENST00000367740 STRCQ7RTU9 1775 aa25.51■■□□□ 1.67
VAMP4-202ENST00000367740 NUP153P49790 1475 aaKnown RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms