RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 CUX1P39880 1505 aa8.21□□□□□ -1.1
TNFSF4-202ENST00000367718 NPM3O75607 178 aaKnown RBP8.21□□□□□ -1.1
TNFSF4-202ENST00000367718 KIF27Q86VH2 1401 aa8.2□□□□□ -1.1
TNFSF4-202ENST00000367718 RRP7BPQ9NSQ0 103 aa8.18□□□□□ -1.1
TNFSF4-202ENST00000367718 CARMIL1Q5VZK9 1371 aa8.18□□□□□ -1.1
TNFSF4-202ENST00000367718 FHOD3Q2V2M9 1422 aa8.18□□□□□ -1.1
TNFSF4-202ENST00000367718 SLC4A1APQ9BWU0 796 aaKnown RBP8.18□□□□□ -1.1
TNFSF4-202ENST00000367718 POLR3GLQ9BT43 218 aa8.17□□□□□ -1.1
TNFSF4-202ENST00000367718 IGF1RP08069 1367 aa8.17□□□□□ -1.1
TNFSF4-202ENST00000367718 MSH5O43196 834 aa8.16□□□□□ -1.1
TNFSF4-202ENST00000367718 DHX57Q6P158 1386 aaKnown RBP8.16□□□□□ -1.1
TNFSF4-202ENST00000367718 TRIM52Q96A61 297 aa8.16□□□□□ -1.1
TNFSF4-202ENST00000367718 CADPSQ9ULU8 1353 aa8.14□□□□□ -1.11
TNFSF4-202ENST00000367718 FGD5Q6ZNL6 1462 aa8.13□□□□□ -1.11
TNFSF4-202ENST00000367718 CCNB3Q8WWL7 1395 aa8.13□□□□□ -1.11
TNFSF4-202ENST00000367718 RAB3GAP2Q9H2M9 1393 aa8.13□□□□□ -1.11
TNFSF4-202ENST00000367718 ARHGAP35Q9NRY4 1499 aa8.13□□□□□ -1.11
TNFSF4-202ENST00000367718 ZNF326Q5BKZ1 582 aaKnown RBP8.13□□□□□ -1.11
TNFSF4-202ENST00000367718 PHLDB1Q86UU1 1377 aa8.13□□□□□ -1.11
TNFSF4-202ENST00000367718 NCBP3Q53F19 620 aaKnown RBP8.12□□□□□ -1.11
TNFSF4-202ENST00000367718 ZNF777Q9ULD5 760 aaPredicted RBP8.12□□□□□ -1.11
TNFSF4-202ENST00000367718 NCAPD3P42695 1498 aa8.12□□□□□ -1.11
TNFSF4-202ENST00000367718 PRXQ9BXM0 1461 aa8.12□□□□□ -1.11
TNFSF4-202ENST00000367718 TOP2BQ02880 1626 aa8.11□□□□□ -1.11
TNFSF4-202ENST00000367718 IRX6P78412 446 aaPredicted RBP8.11□□□□□ -1.11
TNFSF4-202ENST00000367718 CFTRP13569 1480 aa8.09□□□□□ -1.11
TNFSF4-202ENST00000367718 FANCD2Q9BXW9 1451 aa8.09□□□□□ -1.11
TNFSF4-202ENST00000367718 PEG3Q9GZU2 1588 aa8.09□□□□□ -1.12
TNFSF4-202ENST00000367718 CC2D2AQ9P2K1 1620 aa8.07□□□□□ -1.12
TNFSF4-202ENST00000367718 MTUS2Q5JR59 1369 aa8.07□□□□□ -1.12
TNFSF4-202ENST00000367718 ZNF644Q9H582 1327 aaPredicted RBP8.05□□□□□ -1.12
TNFSF4-202ENST00000367718 CNKSR2Q8WXI2 1034 aa8.04□□□□□ -1.12
TNFSF4-202ENST00000367718 AQRO60306 1485 aaKnown RBP eCLIP8.03□□□□□ -1.12
TNFSF4-202ENST00000367718 FKBP8Q14318 412 aa8.02□□□□□ -1.13
TNFSF4-202ENST00000367718 PDS5BQ9NTI5 1447 aa8.02□□□□□ -1.13
TNFSF4-202ENST00000367718 POLA1P09884 1462 aaPredicted RBP8.01□□□□□ -1.13
TNFSF4-202ENST00000367718 PELP1Q8IZL8 1130 aaKnown RBP8□□□□□ -1.13
TNFSF4-202ENST00000367718 ZBTB22O15209 634 aa8□□□□□ -1.13
TNFSF4-202ENST00000367718 SETD5Q9C0A6 1442 aa7.99□□□□□ -1.13
TNFSF4-202ENST00000367718 SUPT16HQ9Y5B9 1047 aaKnown RBP7.99□□□□□ -1.13
TNFSF4-202ENST00000367718 TONSLQ96HA7 1378 aa7.99□□□□□ -1.13
TNFSF4-202ENST00000367718 HMGXB3Q12766 1538 aa7.98□□□□□ -1.13
TNFSF4-202ENST00000367718 LRRC9Q6ZRR7 1453 aa7.97□□□□□ -1.13
TNFSF4-202ENST00000367718 FAM9BQ8IZU0 186 aa7.97□□□□□ -1.13
TNFSF4-202ENST00000367718 KDM2AQ9Y2K7 1162 aa7.97□□□□□ -1.13
TNFSF4-202ENST00000367718 BIVM-ERCC5R4GMW8 1640 aa7.97□□□□□ -1.13
TNFSF4-202ENST00000367718 TOPBP1Q92547 1522 aa7.97□□□□□ -1.13
TNFSF4-202ENST00000367718 SALL2Q9Y467 1007 aaPredicted RBP7.97□□□□□ -1.13
TNFSF4-202ENST00000367718 PTPRKQ15262 1439 aa7.96□□□□□ -1.14
TNFSF4-202ENST00000367718 RRBP1Q9P2E9 1410 aaKnown RBP7.96□□□□□ -1.14
TNFSF4-202ENST00000367718 WDR97A6NE52 1622 aa7.96□□□□□ -1.14
TNFSF4-202ENST00000367718 HNRNPUQ00839 825 aaKnown RBP eCLIP7.96□□□□□ -1.14
TNFSF4-202ENST00000367718 CCDC184Q52MB2 194 aa7.96□□□□□ -1.14
TNFSF4-202ENST00000367718 PCF11O94913 1555 aaKnown RBP7.95□□□□□ -1.14
TNFSF4-202ENST00000367718 ERICH3Q5RHP9 1530 aa7.95□□□□□ -1.14
TNFSF4-202ENST00000367718 ANP32CO43423 234 aa7.95□□□□□ -1.14
TNFSF4-202ENST00000367718 CHMP7Q8WUX9 453 aaPredicted RBP7.95□□□□□ -1.14
TNFSF4-202ENST00000367718 URB2Q14146 1524 aaKnown RBP7.95□□□□□ -1.14
TNFSF4-202ENST00000367718 PPP1R15AO75807 674 aaPredicted RBP7.94□□□□□ -1.14
TNFSF4-202ENST00000367718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.94□□□□□ -1.14
TNFSF4-202ENST00000367718 HSPA5P11021 654 aaKnown RBP7.92□□□□□ -1.14
TNFSF4-202ENST00000367718 TIAM1Q13009 1591 aa7.92□□□□□ -1.14
TNFSF4-202ENST00000367718 GAPVD1Q14C86 1478 aa7.92□□□□□ -1.14
TNFSF4-202ENST00000367718 MAPKBP1O60336 1514 aa7.92□□□□□ -1.14
TNFSF4-202ENST00000367718 L3MBTL2Q969R5 705 aa7.91□□□□□ -1.14
TNFSF4-202ENST00000367718 FHAD1B1AJZ9 1412 aa7.91□□□□□ -1.14
TNFSF4-202ENST00000367718 RGL3Q3MIN7 710 aa7.91□□□□□ -1.14
TNFSF4-202ENST00000367718 ZNF608Q9ULD9 1512 aaPredicted RBP7.91□□□□□ -1.14
TNFSF4-202ENST00000367718 C11orf95C9JLR9 678 aaPredicted RBP7.91□□□□□ -1.14
TNFSF4-202ENST00000367718 CDK13Q14004 1512 aaKnown RBP7.91□□□□□ -1.14
TNFSF4-202ENST00000367718 MPHOSPH9Q99550 1183 aa7.89□□□□□ -1.15
TNFSF4-202ENST00000367718 FGD6Q6ZV73 1430 aa7.89□□□□□ -1.15
TNFSF4-202ENST00000367718 MYT1LQ9UL68 1186 aa7.89□□□□□ -1.15
TNFSF4-202ENST00000367718 CFDP1Q9UEE9 299 aaPredicted RBP7.88□□□□□ -1.15
TNFSF4-202ENST00000367718 NEFLP07196 543 aa7.88□□□□□ -1.15
TNFSF4-202ENST00000367718 CCDC18Q5T9S5 1454 aa7.87□□□□□ -1.15
TNFSF4-202ENST00000367718 NCOA2Q15596 1464 aa7.87□□□□□ -1.15
TNFSF4-202ENST00000367718 HNRNPMP52272 730 aaKnown RBP eCLIP7.87□□□□□ -1.15
TNFSF4-202ENST00000367718 NBPF8Q3BBV2 869 aa7.87□□□□□ -1.15
TNFSF4-202ENST00000367718 PRKCSHP14314 528 aaPredicted RBP7.86□□□□□ -1.15
TNFSF4-202ENST00000367718 MYT1Q01538 1121 aa7.86□□□□□ -1.15
TNFSF4-202ENST00000367718 CLSPNQ9HAW4 1339 aa7.86□□□□□ -1.15
TNFSF4-202ENST00000367718 ERCC6Q03468 1493 aa7.85□□□□□ -1.15
TNFSF4-202ENST00000367718 MRS2Q9HD23 443 aa7.85□□□□□ -1.15
TNFSF4-202ENST00000367718 ABCA10Q8WWZ4 1543 aa7.85□□□□□ -1.15
TNFSF4-202ENST00000367718 WASHC2AQ641Q2 1341 aa7.84□□□□□ -1.15
TNFSF4-202ENST00000367718 FMN1Q68DA7 1419 aa7.84□□□□□ -1.15
TNFSF4-202ENST00000367718 CASKIN1Q8WXD9 1431 aa7.84□□□□□ -1.15
TNFSF4-202ENST00000367718 TSHZ2Q9NRE2 1034 aa7.84□□□□□ -1.15
TNFSF4-202ENST00000367718 DNMBPQ6XZF7 1577 aa7.84□□□□□ -1.15
TNFSF4-202ENST00000367718 PKD2Q13563 968 aa7.84□□□□□ -1.16
TNFSF4-202ENST00000367718 PRG4Q92954 1404 aaPredicted RBP7.83□□□□□ -1.16
TNFSF4-202ENST00000367718 DCAF8L1A6NGE4 600 aa7.83□□□□□ -1.16
TNFSF4-202ENST00000367718 EIF4G2P78344 907 aaKnown RBP eCLIP7.83□□□□□ -1.16
TNFSF4-202ENST00000367718 MAGI3Q5TCQ9 1506 aa7.82□□□□□ -1.16
TNFSF4-202ENST00000367718 NAIPQ13075 1403 aa7.82□□□□□ -1.16
TNFSF4-202ENST00000367718 JPH4Q96JJ6 628 aa7.82□□□□□ -1.16
TNFSF4-202ENST00000367718 MYOM3Q5VTT5 1437 aa7.81□□□□□ -1.16
TNFSF4-202ENST00000367718 DMRT2Q9Y5R5 561 aa7.81□□□□□ -1.16
TNFSF4-202ENST00000367718 B4GALNT3Q6L9W6 998 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms