RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 AEBP2Q6ZN18 517 aaPredicted RBP11.81□□□□□ -0.52
TNFSF4-202ENST00000367718 CHIC1Q5VXU3 224 aa11.54□□□□□ -0.56
TNFSF4-202ENST00000367718 NISCHQ9Y2I1 1504 aa11.2□□□□□ -0.62
TNFSF4-202ENST00000367718 PHF23Q9BUL5 403 aaPredicted RBP10.34□□□□□ -0.75
TNFSF4-202ENST00000367718 SHROOM4Q9ULL8 1493 aa10.33□□□□□ -0.76
TNFSF4-202ENST00000367718 DCAF8L2P0C7V8 631 aa10.25□□□□□ -0.77
TNFSF4-202ENST00000367718 SUPT5HO00267 1087 aaKnown RBP10.12□□□□□ -0.79
TNFSF4-202ENST00000367718 SENP3Q9H4L4 574 aaPredicted RBP9.75□□□□□ -0.85
TNFSF4-202ENST00000367718 EHMT2Q96KQ7 1210 aa9.72□□□□□ -0.85
TNFSF4-202ENST00000367718 LOC105371045A0A1W2PR82 267 aa9.5□□□□□ -0.89
TNFSF4-202ENST00000367718 FAM9AQ8IZU1 332 aaPredicted RBP9.49□□□□□ -0.89
TNFSF4-202ENST00000367718 PLPPR3Q6T4P5 718 aa9.45□□□□□ -0.9
TNFSF4-202ENST00000367718 PCGF6Q9BYE7 350 aa9.44□□□□□ -0.9
TNFSF4-202ENST00000367718 MYO15BQ96JP2 1530 aa9.41□□□□□ -0.9
TNFSF4-202ENST00000367718 ZCCHC6Q5VYS8 1495 aaKnown RBP9.39□□□□□ -0.91
TNFSF4-202ENST00000367718 PPARGC1BQ86YN6 1023 aaKnown RBP9.35□□□□□ -0.91
TNFSF4-202ENST00000367718 TTBK1Q5TCY1 1321 aaPredicted RBP9.32□□□□□ -0.92
TNFSF4-202ENST00000367718 ABCC9O60706 1549 aa9.3□□□□□ -0.92
TNFSF4-202ENST00000367718 FOXD1Q16676 465 aa9.21□□□□□ -0.94
TNFSF4-202ENST00000367718 TRIM41Q8WV44 630 aa9.19□□□□□ -0.94
TNFSF4-202ENST00000367718 ADRA2BP18089 450 aa9.18□□□□□ -0.94
TNFSF4-202ENST00000367718 SCRIBQ14160 1630 aa9.18□□□□□ -0.94
TNFSF4-202ENST00000367718 PPP6R1Q9UPN7 881 aa9.17□□□□□ -0.94
TNFSF4-202ENST00000367718 CCDC180Q9P1Z9 1646 aa9.16□□□□□ -0.94
TNFSF4-202ENST00000367718 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
TNFSF4-202ENST00000367718 RANGAP1P46060 587 aaPredicted RBP9.11□□□□□ -0.95
TNFSF4-202ENST00000367718 HRCP23327 699 aa9.1□□□□□ -0.95
TNFSF4-202ENST00000367718 CECR2Q9BXF3 1484 aa9.03□□□□□ -0.96
TNFSF4-202ENST00000367718 RSF1Q96T23 1441 aaPredicted RBP9.01□□□□□ -0.97
TNFSF4-202ENST00000367718 RB1CC1Q8TDY2 1594 aa8.94□□□□□ -0.98
TNFSF4-202ENST00000367718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.92□□□□□ -0.98
TNFSF4-202ENST00000367718 TRIM26Q12899 539 aaPredicted RBP8.92□□□□□ -0.98
TNFSF4-202ENST00000367718 MROH2BQ7Z745 1585 aa8.87□□□□□ -0.99
TNFSF4-202ENST00000367718 UBTFP17480 764 aaKnown RBP8.87□□□□□ -0.99
TNFSF4-202ENST00000367718 DCAF1Q9Y4B6 1507 aa8.82□□□□□ -1
TNFSF4-202ENST00000367718 WIZO95785 1651 aa8.81□□□□□ -1
TNFSF4-202ENST00000367718 CCER1Q8TC90 406 aaPredicted RBP8.8□□□□□ -1
TNFSF4-202ENST00000367718 PIAS4Q8N2W9 510 aaPredicted RBP8.77□□□□□ -1.01
TNFSF4-202ENST00000367718 HNRNPUL2Q1KMD3 747 aaKnown RBP8.77□□□□□ -1.01
TNFSF4-202ENST00000367718 ABCC8Q09428 1581 aa8.77□□□□□ -1.01
TNFSF4-202ENST00000367718 SOGA1O94964 1423 aa8.72□□□□□ -1.01
TNFSF4-202ENST00000367718 CCDC88BA6NC98 1476 aa8.71□□□□□ -1.02
TNFSF4-202ENST00000367718 RUSC2Q8N2Y8 1516 aa8.71□□□□□ -1.02
TNFSF4-202ENST00000367718 ITGAEP38570 1179 aa8.68□□□□□ -1.02
TNFSF4-202ENST00000367718 YTHDC1Q96MU7 727 aaKnown RBP8.68□□□□□ -1.02
TNFSF4-202ENST00000367718 KCNA4P22459 653 aa8.66□□□□□ -1.02
TNFSF4-202ENST00000367718 NACADO15069 1562 aa8.65□□□□□ -1.03
TNFSF4-202ENST00000367718 CSRNP3Q8WYN3 585 aa8.64□□□□□ -1.03
TNFSF4-202ENST00000367718 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
TNFSF4-202ENST00000367718 P3H3Q8IVL6 736 aa8.58□□□□□ -1.04
TNFSF4-202ENST00000367718 APLP2Q06481 763 aa8.57□□□□□ -1.04
TNFSF4-202ENST00000367718 CEP162Q5TB80 1403 aa8.56□□□□□ -1.04
TNFSF4-202ENST00000367718 BAZ1AQ9NRL2 1556 aaPredicted RBP8.55□□□□□ -1.04
TNFSF4-202ENST00000367718 ZEB1P37275 1124 aaPredicted RBP8.53□□□□□ -1.04
TNFSF4-202ENST00000367718 SCAF1Q9H7N4 1312 aaKnown RBP8.53□□□□□ -1.04
TNFSF4-202ENST00000367718 DIEXFQ68CQ4 756 aaKnown RBP8.51□□□□□ -1.05
TNFSF4-202ENST00000367718 SMARCA4P51532 1647 aa8.5□□□□□ -1.05
TNFSF4-202ENST00000367718 ARID3CA6NKF2 412 aa8.5□□□□□ -1.05
TNFSF4-202ENST00000367718 WRNQ14191 1432 aaPredicted RBP eCLIP8.49□□□□□ -1.05
TNFSF4-202ENST00000367718 SMARCA2P51531 1590 aa8.49□□□□□ -1.05
TNFSF4-202ENST00000367718 NEUROD1Q13562 356 aa8.49□□□□□ -1.05
TNFSF4-202ENST00000367718 TOP2AP11388 1531 aaKnown RBP8.46□□□□□ -1.05
TNFSF4-202ENST00000367718 KANK4Q5T7N3 995 aaPredicted RBP8.46□□□□□ -1.06
TNFSF4-202ENST00000367718 DNAJC5BQ9UF47 199 aa8.45□□□□□ -1.06
TNFSF4-202ENST00000367718 PPP4R3CPQ6ZMV5 832 aa8.44□□□□□ -1.06
TNFSF4-202ENST00000367718 BAZ1BQ9UIG0 1483 aaKnown RBP8.44□□□□□ -1.06
TNFSF4-202ENST00000367718 HIRIP3Q9BW71 556 aaPredicted RBP8.43□□□□□ -1.06
TNFSF4-202ENST00000367718 UNC13AQ9UPW8 1703 aa8.43□□□□□ -1.06
TNFSF4-202ENST00000367718 RAPGEF2Q9Y4G8 1499 aa8.42□□□□□ -1.06
TNFSF4-202ENST00000367718 CLIP1P30622 1438 aa8.42□□□□□ -1.06
TNFSF4-202ENST00000367718 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
TNFSF4-202ENST00000367718 BICRAQ9NZM4 1560 aa8.42□□□□□ -1.06
TNFSF4-202ENST00000367718 MIER1Q8N108 512 aa8.41□□□□□ -1.06
TNFSF4-202ENST00000367718 TNIKQ9UKE5 1360 aa8.4□□□□□ -1.06
TNFSF4-202ENST00000367718 ATAD2BQ9ULI0 1458 aa8.4□□□□□ -1.06
TNFSF4-202ENST00000367718 FAM50AQ14320 339 aaKnown RBP8.39□□□□□ -1.07
TNFSF4-202ENST00000367718 SYNJ1O43426 1573 aa8.39□□□□□ -1.07
TNFSF4-202ENST00000367718 CNGB1Q14028 1251 aaPredicted RBP8.38□□□□□ -1.07
TNFSF4-202ENST00000367718 GOLGA3Q08378 1498 aa8.37□□□□□ -1.07
TNFSF4-202ENST00000367718 EIF4G1Q04637 1599 aaKnown RBP8.35□□□□□ -1.07
TNFSF4-202ENST00000367718 ZNF316A6NFI3 1004 aaPredicted RBP8.35□□□□□ -1.07
TNFSF4-202ENST00000367718 ACIN1Q9UKV3 1341 aaKnown RBP8.33□□□□□ -1.08
TNFSF4-202ENST00000367718 MAPK8IP2Q13387 824 aaPredicted RBP8.31□□□□□ -1.08
TNFSF4-202ENST00000367718 SIN3AQ96ST3 1273 aa8.3□□□□□ -1.08
TNFSF4-202ENST00000367718 KCNH8Q96L42 1107 aa8.3□□□□□ -1.08
TNFSF4-202ENST00000367718 CEP164Q9UPV0 1460 aa8.29□□□□□ -1.08
TNFSF4-202ENST00000367718 SENP3-EIF4A1A0A087X0R7 540 aa8.28□□□□□ -1.08
TNFSF4-202ENST00000367718 CENPBP07199 599 aaPredicted RBP8.27□□□□□ -1.09
TNFSF4-202ENST00000367718 BCANQ96GW7 911 aa8.26□□□□□ -1.09
TNFSF4-202ENST00000367718 CHIC2Q9UKJ5 165 aa8.26□□□□□ -1.09
TNFSF4-202ENST00000367718 CUX2O14529 1486 aa8.26□□□□□ -1.09
TNFSF4-202ENST00000367718 VPS8Q8N3P4 1428 aa8.25□□□□□ -1.09
TNFSF4-202ENST00000367718 NESP48681 1621 aa8.24□□□□□ -1.09
TNFSF4-202ENST00000367718 ARAP1Q96P48 1450 aa8.23□□□□□ -1.09
TNFSF4-202ENST00000367718 TDRD9Q8NDG6 1382 aaKnown RBP8.23□□□□□ -1.09
TNFSF4-202ENST00000367718 EEA1Q15075 1411 aa8.22□□□□□ -1.09
TNFSF4-202ENST00000367718 FBLN2P98095 1184 aa8.22□□□□□ -1.09
TNFSF4-202ENST00000367718 KIF21BO75037 1637 aa8.22□□□□□ -1.09
TNFSF4-202ENST00000367718 RAD54L2Q9Y4B4 1467 aa8.22□□□□□ -1.09
TNFSF4-202ENST00000367718 DDX10Q13206 875 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms