RNA–Protein interactions for RNA: ENST00000367311.4

PHLDA3-202, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHLDA3, Length 2,640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-202ENST00000367311 FKBP8Q14318 412 aa28.64■■■□□ 2.17
PHLDA3-202ENST00000367311 WDR97A6NE52 1622 aa28.59■■■□□ 2.17
PHLDA3-202ENST00000367311 PHLDB1Q86UU1 1377 aa28.56■■■□□ 2.16
PHLDA3-202ENST00000367311 TRIM52Q96A61 297 aa28.55■■■□□ 2.16
PHLDA3-202ENST00000367311 SETD5Q9C0A6 1442 aa28.52■■■□□ 2.16
PHLDA3-202ENST00000367311 IGF1RP08069 1367 aa28.49■■■□□ 2.15
PHLDA3-202ENST00000367311 TIAM1Q13009 1591 aa28.46■■■□□ 2.15
PHLDA3-202ENST00000367311 PPP1R15AO75807 674 aaPredicted RBP28.43■■■□□ 2.14
PHLDA3-202ENST00000367311 LRRC9Q6ZRR7 1453 aa28.41■■■□□ 2.14
PHLDA3-202ENST00000367311 RBM19Q9Y4C8 960 aaKnown RBP28.41■■■□□ 2.14
PHLDA3-202ENST00000367311 CFTRP13569 1480 aa28.4■■■□□ 2.14
PHLDA3-202ENST00000367311 NCAPD3P42695 1498 aa28.39■■■□□ 2.13
PHLDA3-202ENST00000367311 CARMIL1Q5VZK9 1371 aa28.38■■■□□ 2.13
PHLDA3-202ENST00000367311 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
PHLDA3-202ENST00000367311 FHOD3Q2V2M9 1422 aa28.27■■■□□ 2.12
PHLDA3-202ENST00000367311 ANP32CO43423 234 aa28.26■■■□□ 2.12
PHLDA3-202ENST00000367311 PCF11O94913 1555 aaKnown RBP28.25■■■□□ 2.11
PHLDA3-202ENST00000367311 NEFLP07196 543 aa28.24■■■□□ 2.11
PHLDA3-202ENST00000367311 FGD5Q6ZNL6 1462 aa28.23■■■□□ 2.11
PHLDA3-202ENST00000367311 IRX6P78412 446 aaPredicted RBP28.22■■■□□ 2.11
PHLDA3-202ENST00000367311 MAP3K1Q13233 1512 aa28.17■■■□□ 2.1
PHLDA3-202ENST00000367311 MSH5O43196 834 aa28.16■■■□□ 2.1
PHLDA3-202ENST00000367311 FHAD1B1AJZ9 1412 aa28.12■■■□□ 2.09
PHLDA3-202ENST00000367311 TONSLQ96HA7 1378 aa28.11■■■□□ 2.09
PHLDA3-202ENST00000367311 CCER2I3L3R5 266 aa28.11■■■□□ 2.09
PHLDA3-202ENST00000367311 CFAP43Q8NDM7 1665 aa28.07■■■□□ 2.08
PHLDA3-202ENST00000367311 RAD54L2Q9Y4B4 1467 aa28.07■■■□□ 2.08
PHLDA3-202ENST00000367311 PTPRKQ15262 1439 aa28.06■■■□□ 2.08
PHLDA3-202ENST00000367311 CADPSQ9ULU8 1353 aa28.05■■■□□ 2.08
PHLDA3-202ENST00000367311 HNRNPUQ00839 825 aaKnown RBP eCLIP28.05■■■□□ 2.08
PHLDA3-202ENST00000367311 TIMELESSQ9UNS1 1208 aa28.02■■■□□ 2.08
PHLDA3-202ENST00000367311 CCDC18Q5T9S5 1454 aa27.99■■■□□ 2.07
PHLDA3-202ENST00000367311 AQRO60306 1485 aaKnown RBP eCLIP27.97■■■□□ 2.071e-6■■■■□ 26.1
PHLDA3-202ENST00000367311 FGD6Q6ZV73 1430 aa27.97■■■□□ 2.07
PHLDA3-202ENST00000367311 CHIC2Q9UKJ5 165 aa27.95■■■□□ 2.06
PHLDA3-202ENST00000367311 MTUS2Q5JR59 1369 aa27.92■■■□□ 2.06
PHLDA3-202ENST00000367311 CCDC184Q52MB2 194 aa27.92■■■□□ 2.06
PHLDA3-202ENST00000367311 RRP7BPQ9NSQ0 103 aa27.92■■■□□ 2.06
PHLDA3-202ENST00000367311 CASKIN1Q8WXD9 1431 aa27.92■■■□□ 2.06
PHLDA3-202ENST00000367311 PRDM2Q13029 1718 aa27.91■■■□□ 2.06
PHLDA3-202ENST00000367311 FYCO1Q9BQS8 1478 aa27.91■■■□□ 2.06
PHLDA3-202ENST00000367311 ERICH6Q7L0X2 663 aa27.9■■■□□ 2.06
PHLDA3-202ENST00000367311 FANCIQ9NVI1 1328 aa27.89■■■□□ 2.06
PHLDA3-202ENST00000367311 WASHC2AQ641Q2 1341 aa27.86■■■□□ 2.05
PHLDA3-202ENST00000367311 HSPA5P11021 654 aaKnown RBP27.86■■■□□ 2.05
PHLDA3-202ENST00000367311 FANCD2Q9BXW9 1451 aa27.85■■■□□ 2.05
PHLDA3-202ENST00000367311 UACAQ9BZF9 1416 aa27.84■■■□□ 2.05
PHLDA3-202ENST00000367311 FOXD1Q16676 465 aa27.83■■■□□ 2.05
PHLDA3-202ENST00000367311 NAIPQ13075 1403 aa27.82■■■□□ 2.04
PHLDA3-202ENST00000367311 PTPN23Q9H3S7 1636 aa27.82■■■□□ 2.04
PHLDA3-202ENST00000367311 ARID3CA6NKF2 412 aa27.82■■■□□ 2.04
PHLDA3-202ENST00000367311 HFM1A2PYH4 1435 aa27.81■■■□□ 2.04
PHLDA3-202ENST00000367311 CDK11AQ9UQ88 783 aaPredicted RBP27.79■■■□□ 2.04
PHLDA3-202ENST00000367311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.79■■■□□ 2.04
PHLDA3-202ENST00000367311 KDM5BQ9UGL1 1544 aa27.78■■■□□ 2.04
PHLDA3-202ENST00000367311 POLA1P09884 1462 aaPredicted RBP27.78■■■□□ 2.04
PHLDA3-202ENST00000367311 CNGB1Q14028 1251 aaPredicted RBP27.78■■■□□ 2.04
PHLDA3-202ENST00000367311 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
PHLDA3-202ENST00000367311 NESP48681 1621 aa27.76■■■□□ 2.03
PHLDA3-202ENST00000367311 C11orf95C9JLR9 678 aaPredicted RBP27.76■■■□□ 2.03
PHLDA3-202ENST00000367311 FAM9BQ8IZU0 186 aa27.75■■■□□ 2.03
PHLDA3-202ENST00000367311 NCOA2Q15596 1464 aa27.75■■■□□ 2.03
PHLDA3-202ENST00000367311 EFCAB5A4FU69 1503 aa27.72■■■□□ 2.03
PHLDA3-202ENST00000367311 LRRIQ1Q96JM4 1722 aa27.72■■■□□ 2.03
PHLDA3-202ENST00000367311 FMN1Q68DA7 1419 aa27.72■■■□□ 2.03
PHLDA3-202ENST00000367311 TDRD9Q8NDG6 1382 aaKnown RBP27.72■■■□□ 2.03
PHLDA3-202ENST00000367311 SENP3-EIF4A1A0A087X0R7 540 aa27.71■■■□□ 2.03
PHLDA3-202ENST00000367311 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
PHLDA3-202ENST00000367311 PRKCSHP14314 528 aaPredicted RBP27.7■■■□□ 2.02
PHLDA3-202ENST00000367311 TOPBP1Q92547 1522 aa27.7■■■□□ 2.02
PHLDA3-202ENST00000367311 MYOM3Q5VTT5 1437 aa27.68■■■□□ 2.02
PHLDA3-202ENST00000367311 B4GALNT3Q6L9W6 998 aa27.67■■■□□ 2.02
PHLDA3-202ENST00000367311 CTTNBP2Q8WZ74 1663 aa27.66■■■□□ 2.02
PHLDA3-202ENST00000367311 DENND4BO75064 1496 aaPredicted RBP27.65■■■□□ 2.02
PHLDA3-202ENST00000367311 DEKP35659 375 aaKnown RBP27.64■■■□□ 2.02
PHLDA3-202ENST00000367311 L3MBTL2Q969R5 705 aa27.64■■■□□ 2.02
PHLDA3-202ENST00000367311 EIF4G2P78344 907 aaKnown RBP eCLIP27.63■■■□□ 2.01
PHLDA3-202ENST00000367311 DNMBPQ6XZF7 1577 aa27.63■■■□□ 2.01
PHLDA3-202ENST00000367311 KDM6BO15054 1643 aa27.63■■■□□ 2.01
PHLDA3-202ENST00000367311 MYT1LQ9UL68 1186 aa27.62■■■□□ 2.01
PHLDA3-202ENST00000367311 MAGI3Q5TCQ9 1506 aa27.6■■■□□ 2.01
PHLDA3-202ENST00000367311 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
PHLDA3-202ENST00000367311 MRS2Q9HD23 443 aa27.59■■■□□ 2.01
PHLDA3-202ENST00000367311 MPHOSPH9Q99550 1183 aa27.57■■■□□ 2
PHLDA3-202ENST00000367311 GRIN2BQ13224 1484 aa27.56■■■□□ 2
PHLDA3-202ENST00000367311 PRKRIP1Q9H875 184 aaPredicted RBP27.55■■■□□ 2
PHLDA3-202ENST00000367311 NBPF8Q3BBV2 869 aa27.54■■■□□ 2
PHLDA3-202ENST00000367311 CUL7Q14999 1698 aa27.53■■■□□ 2
PHLDA3-202ENST00000367311 CNTLNQ9NXG0 1405 aa27.53■■■□□ 2
PHLDA3-202ENST00000367311 PPP4R2Q9NY27 417 aa27.53■■■□□ 2
PHLDA3-202ENST00000367311 SUPT6HQ7KZ85 1726 aaKnown RBP27.5■■□□□ 1.99
PHLDA3-202ENST00000367311 POLR3GLQ9BT43 218 aa27.49■■□□□ 1.99
PHLDA3-202ENST00000367311 CCDC7Q96M83 1385 aa27.48■■□□□ 1.99
PHLDA3-202ENST00000367311 UGGT2Q9NYU1 1516 aa27.47■■□□□ 1.99
PHLDA3-202ENST00000367311 SAMD9Q5K651 1589 aa27.46■■□□□ 1.99
PHLDA3-202ENST00000367311 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
PHLDA3-202ENST00000367311 EHBP1L1Q8N3D4 1523 aa27.44■■□□□ 1.98
PHLDA3-202ENST00000367311 KIF7Q2M1P5 1343 aa27.41■■□□□ 1.98
PHLDA3-202ENST00000367311 GAPVD1Q14C86 1478 aa27.4■■□□□ 1.98
PHLDA3-202ENST00000367311 ERICH6BQ5W0A0 696 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms