RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 JPH4Q96JJ6 628 aa18.14■□□□□ 0.49
PARP1-201ENST00000366790 PRG4Q92954 1404 aaPredicted RBP18.14■□□□□ 0.49
PARP1-201ENST00000366790 KIAA0586Q9BVV6 1533 aa18.09■□□□□ 0.49
PARP1-201ENST00000366790 CARMIL1Q5VZK9 1371 aa18.04■□□□□ 0.48
PARP1-201ENST00000366790 KIF13AQ9H1H9 1805 aa17.95■□□□□ 0.46
PARP1-201ENST00000366790 ADCY10Q96PN6 1610 aa17.93■□□□□ 0.46
PARP1-201ENST00000366790 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
PARP1-201ENST00000366790 IQGAP2Q13576 1575 aa17.91■□□□□ 0.46
PARP1-201ENST00000366790 NPM1P06748 294 aaKnown RBP eCLIP17.9■□□□□ 0.46
PARP1-201ENST00000366790 RAPGEF2Q9Y4G8 1499 aa17.89■□□□□ 0.45
PARP1-201ENST00000366790 CARMIL2Q6F5E8 1435 aa17.89■□□□□ 0.45
PARP1-201ENST00000366790 ABCC10Q5T3U5 1492 aa17.88■□□□□ 0.45
PARP1-201ENST00000366790 PTPRGP23470 1445 aa17.88■□□□□ 0.45
PARP1-201ENST00000366790 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
PARP1-201ENST00000366790 DIP2BQ9P265 1576 aa17.83■□□□□ 0.45
PARP1-201ENST00000366790 UGGT2Q9NYU1 1516 aa17.83■□□□□ 0.45
PARP1-201ENST00000366790 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
PARP1-201ENST00000366790 FAM69CQ0P6D2 419 aa17.81■□□□□ 0.44
PARP1-201ENST00000366790 UHRF1BP1LA0JNW5 1464 aa17.8■□□□□ 0.44
PARP1-201ENST00000366790 ABCC2Q92887 1545 aa17.79■□□□□ 0.44
PARP1-201ENST00000366790 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
PARP1-201ENST00000366790 UACAQ9BZF9 1416 aa17.75■□□□□ 0.43
PARP1-201ENST00000366790 CTTNBP2Q8WZ74 1663 aa17.75■□□□□ 0.43
PARP1-201ENST00000366790 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
PARP1-201ENST00000366790 PLB1Q6P1J6 1458 aa17.72■□□□□ 0.43
PARP1-201ENST00000366790 KDM5BQ9UGL1 1544 aa17.71■□□□□ 0.43
PARP1-201ENST00000366790 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.42
PARP1-201ENST00000366790 GLI2P10070 1586 aa17.7■□□□□ 0.42
PARP1-201ENST00000366790 ASXL2Q76L83 1435 aa17.69■□□□□ 0.42
PARP1-201ENST00000366790 GOLGA3Q08378 1498 aa17.68■□□□□ 0.42
PARP1-201ENST00000366790 TSPOAP1O95153 1857 aa17.67■□□□□ 0.42
PARP1-201ENST00000366790 KDM6BO15054 1643 aa17.64■□□□□ 0.41
PARP1-201ENST00000366790 ZCCHC11Q5TAX3 1644 aaKnown RBP17.63■□□□□ 0.41
PARP1-201ENST00000366790 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
PARP1-201ENST00000366790 PPRC1Q5VV67 1664 aaKnown RBP17.61■□□□□ 0.41
PARP1-201ENST00000366790 CSRNP3Q8WYN3 585 aa17.6■□□□□ 0.41
PARP1-201ENST00000366790 EEA1Q15075 1411 aa17.6■□□□□ 0.41
PARP1-201ENST00000366790 EPRSP07814 1512 aaKnown RBP17.6■□□□□ 0.41
PARP1-201ENST00000366790 ABCA8O94911 1581 aa17.6■□□□□ 0.41
PARP1-201ENST00000366790 MAP3K4Q9Y6R4 1608 aa17.58■□□□□ 0.4
PARP1-201ENST00000366790 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
PARP1-201ENST00000366790 TEX14Q8IWB6 1497 aa17.52■□□□□ 0.4
PARP1-201ENST00000366790 SAMD9Q5K651 1589 aa17.52■□□□□ 0.39
PARP1-201ENST00000366790 FAM9AQ8IZU1 332 aaPredicted RBP17.49■□□□□ 0.39
PARP1-201ENST00000366790 CFAP43Q8NDM7 1665 aa17.47■□□□□ 0.39
PARP1-201ENST00000366790 COL17A1Q9UMD9 1497 aaPredicted RBP17.45■□□□□ 0.38
PARP1-201ENST00000366790 MAGI3Q5TCQ9 1506 aa17.45■□□□□ 0.38
PARP1-201ENST00000366790 ATP10BO94823 1461 aa17.44■□□□□ 0.38
PARP1-201ENST00000366790 KIF21BO75037 1637 aa17.43■□□□□ 0.38
PARP1-201ENST00000366790 CD109Q6YHK3 1445 aa17.42■□□□□ 0.38
PARP1-201ENST00000366790 P3H3Q8IVL6 736 aa17.42■□□□□ 0.38
PARP1-201ENST00000366790 RAPGEF6Q8TEU7 1601 aa17.41■□□□□ 0.38
PARP1-201ENST00000366790 KDM4FA0A1W2PPD8 638 aa17.4■□□□□ 0.38
PARP1-201ENST00000366790 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
PARP1-201ENST00000366790 EFCAB5A4FU69 1503 aa17.37■□□□□ 0.37
PARP1-201ENST00000366790 ABCA9Q8IUA7 1624 aa17.35■□□□□ 0.37
PARP1-201ENST00000366790 NUP153P49790 1475 aaKnown RBP17.34■□□□□ 0.37
PARP1-201ENST00000366790 FHOD3Q2V2M9 1422 aa17.34■□□□□ 0.37
PARP1-201ENST00000366790 CHIC1Q5VXU3 224 aa17.33■□□□□ 0.36
PARP1-201ENST00000366790 ARAP3Q8WWN8 1544 aa17.31■□□□□ 0.36
PARP1-201ENST00000366790 PHLDB1Q86UU1 1377 aa17.31■□□□□ 0.36
PARP1-201ENST00000366790 ARID3CA6NKF2 412 aa17.31■□□□□ 0.36
PARP1-201ENST00000366790 ADGRL1O94910 1474 aa17.29■□□□□ 0.36
PARP1-201ENST00000366790 RANGAP1P46060 587 aaPredicted RBP17.26■□□□□ 0.35
PARP1-201ENST00000366790 NEO1Q92859 1461 aa17.25■□□□□ 0.35
PARP1-201ENST00000366790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
PARP1-201ENST00000366790 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
PARP1-201ENST00000366790 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
PARP1-201ENST00000366790 UBTFP17480 764 aaKnown RBP17.22■□□□□ 0.35
PARP1-201ENST00000366790 FMN1Q68DA7 1419 aa17.2■□□□□ 0.34
PARP1-201ENST00000366790 ARHGAP35Q9NRY4 1499 aa17.19■□□□□ 0.34
PARP1-201ENST00000366790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.343e-7■■□□□ 13.6
PARP1-201ENST00000366790 CFAP74Q9C0B2 1584 aa17.15■□□□□ 0.34
PARP1-201ENST00000366790 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
PARP1-201ENST00000366790 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
PARP1-201ENST00000366790 FRMPD1Q5SYB0 1578 aa17.15■□□□□ 0.34
PARP1-201ENST00000366790 RAPGEF3O95398 923 aa17.13■□□□□ 0.33
PARP1-201ENST00000366790 TTC37Q6PGP7 1564 aa17.13■□□□□ 0.33
PARP1-201ENST00000366790 AKNAQ7Z591 1439 aa17.12■□□□□ 0.33
PARP1-201ENST00000366790 FANCAO15360 1455 aa17.12■□□□□ 0.33
PARP1-201ENST00000366790 DENND4BO75064 1496 aaPredicted RBP17.11■□□□□ 0.33
PARP1-201ENST00000366790 RICTORQ6R327 1708 aa17.1■□□□□ 0.33
PARP1-201ENST00000366790 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
PARP1-201ENST00000366790 CDK11AQ9UQ88 783 aaPredicted RBP17.08■□□□□ 0.32
PARP1-201ENST00000366790 PLCH2O75038 1416 aa17.07■□□□□ 0.32
PARP1-201ENST00000366790 ADAMTSL3P82987 1691 aa17.07■□□□□ 0.32
PARP1-201ENST00000366790 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
PARP1-201ENST00000366790 ARHGEF40Q8TER5 1519 aa17.06■□□□□ 0.32
PARP1-201ENST00000366790 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
PARP1-201ENST00000366790 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
PARP1-201ENST00000366790 MYO5CQ9NQX4 1742 aa17.04■□□□□ 0.32
PARP1-201ENST00000366790 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
PARP1-201ENST00000366790 BCORL1Q5H9F3 1711 aa17.03■□□□□ 0.32
PARP1-201ENST00000366790 MAGI2Q86UL8 1455 aa17.03■□□□□ 0.32
PARP1-201ENST00000366790 KIF14Q15058 1648 aa17.03■□□□□ 0.32
PARP1-201ENST00000366790 HECW2Q9P2P5 1572 aa17.02■□□□□ 0.32
PARP1-201ENST00000366790 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.31
PARP1-201ENST00000366790 CCDC18Q5T9S5 1454 aa17■□□□□ 0.31
PARP1-201ENST00000366790 CLIP1P30622 1438 aa17■□□□□ 0.31
PARP1-201ENST00000366790 POGZQ7Z3K3 1410 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms