RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 KIAA0586Q9BVV6 1533 aa28.53■■■□□ 2.16
CKLF-204ENST00000362093 ERCC6L2Q5T890 1561 aa28.52■■■□□ 2.16
CKLF-204ENST00000362093 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
CKLF-204ENST00000362093 RAPGEF2Q9Y4G8 1499 aa28.5■■■□□ 2.15
CKLF-204ENST00000362093 PRG4Q92954 1404 aaPredicted RBP28.48■■■□□ 2.15
CKLF-204ENST00000362093 PRXQ9BXM0 1461 aa28.4■■■□□ 2.14
CKLF-204ENST00000362093 CSRNP3Q8WYN3 585 aa28.4■■■□□ 2.14
CKLF-204ENST00000362093 EEA1Q15075 1411 aa28.35■■■□□ 2.13
CKLF-204ENST00000362093 IQGAP2Q13576 1575 aa28.29■■■□□ 2.12
CKLF-204ENST00000362093 FAM9AQ8IZU1 332 aaPredicted RBP28.24■■■□□ 2.11
CKLF-204ENST00000362093 CARMIL2Q6F5E8 1435 aa28.21■■■□□ 2.11
CKLF-204ENST00000362093 UGGT2Q9NYU1 1516 aa28.19■■■□□ 2.1
CKLF-204ENST00000362093 DISP1Q96F81 1524 aa28.16■■■□□ 2.1
CKLF-204ENST00000362093 TNIKQ9UKE5 1360 aa28.15■■■□□ 2.1
CKLF-204ENST00000362093 PTPRGP23470 1445 aa28.15■■■□□ 2.1
CKLF-204ENST00000362093 CTTNBP2Q8WZ74 1663 aa28.13■■■□□ 2.09
CKLF-204ENST00000362093 TRHP20396 242 aaPredicted RBP28.11■■■□□ 2.09
CKLF-204ENST00000362093 TTBK1Q5TCY1 1321 aaPredicted RBP28.06■■■□□ 2.08
CKLF-204ENST00000362093 KIAA0556O60303 1618 aa28.03■■■□□ 2.08
CKLF-204ENST00000362093 KIF21BO75037 1637 aa28.02■■■□□ 2.08
CKLF-204ENST00000362093 ADCY10Q96PN6 1610 aa28.01■■■□□ 2.07
CKLF-204ENST00000362093 NPM1P06748 294 aaKnown RBP eCLIP28.01■■■□□ 2.07
CKLF-204ENST00000362093 GOLGA3Q08378 1498 aa28.01■■■□□ 2.07
CKLF-204ENST00000362093 UACAQ9BZF9 1416 aa27.94■■■□□ 2.06
CKLF-204ENST00000362093 UHRF1BP1LA0JNW5 1464 aa27.92■■■□□ 2.06
CKLF-204ENST00000362093 P3H3Q8IVL6 736 aa27.88■■■□□ 2.05
CKLF-204ENST00000362093 ABCC2Q92887 1545 aa27.87■■■□□ 2.05
CKLF-204ENST00000362093 AEBP2Q6ZN18 517 aaPredicted RBP27.87■■■□□ 2.05
CKLF-204ENST00000362093 UBTFP17480 764 aaKnown RBP27.86■■■□□ 2.05
CKLF-204ENST00000362093 EHMT2Q96KQ7 1210 aa27.86■■■□□ 2.05
CKLF-204ENST00000362093 MAPKBP1O60336 1514 aa27.86■■■□□ 2.05
CKLF-204ENST00000362093 SAMD9Q5K651 1589 aa27.82■■■□□ 2.04
CKLF-204ENST00000362093 RANGAP1P46060 587 aaPredicted RBP27.82■■■□□ 2.04
CKLF-204ENST00000362093 PLB1Q6P1J6 1458 aa27.81■■■□□ 2.04
CKLF-204ENST00000362093 KDM5BQ9UGL1 1544 aa27.78■■■□□ 2.04
CKLF-204ENST00000362093 ABCC10Q5T3U5 1492 aa27.78■■■□□ 2.04
CKLF-204ENST00000362093 ABCA8O94911 1581 aa27.77■■■□□ 2.04
CKLF-204ENST00000362093 FAM69CQ0P6D2 419 aa27.76■■■□□ 2.03
CKLF-204ENST00000362093 ASXL2Q76L83 1435 aa27.71■■■□□ 2.03
CKLF-204ENST00000362093 KIF13AQ9H1H9 1805 aa27.71■■■□□ 2.03
CKLF-204ENST00000362093 FHOD3Q2V2M9 1422 aa27.68■■■□□ 2.02
CKLF-204ENST00000362093 EFCAB5A4FU69 1503 aa27.68■■■□□ 2.02
CKLF-204ENST00000362093 DIP2BQ9P265 1576 aa27.67■■■□□ 2.02
CKLF-204ENST00000362093 ZCCHC11Q5TAX3 1644 aaKnown RBP27.66■■■□□ 2.02
CKLF-204ENST00000362093 ATP10BO94823 1461 aa27.59■■■□□ 2.01
CKLF-204ENST00000362093 ARHGAP35Q9NRY4 1499 aa27.58■■■□□ 2.01
CKLF-204ENST00000362093 RAPGEF6Q8TEU7 1601 aa27.57■■■□□ 2
CKLF-204ENST00000362093 EPRSP07814 1512 aaKnown RBP27.56■■■□□ 2
CKLF-204ENST00000362093 ARID3CA6NKF2 412 aa27.55■■■□□ 2
CKLF-204ENST00000362093 GLI2P10070 1586 aa27.55■■■□□ 2
CKLF-204ENST00000362093 WDR7Q9Y4E6 1490 aa27.53■■■□□ 2
CKLF-204ENST00000362093 NUP153P49790 1475 aaKnown RBP27.51■■■□□ 2
CKLF-204ENST00000362093 FMN1Q68DA7 1419 aa27.47■■□□□ 1.99
CKLF-204ENST00000362093 KCNH8Q96L42 1107 aa27.46■■□□□ 1.99
CKLF-204ENST00000362093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.44■■□□□ 1.98
CKLF-204ENST00000362093 HNRNPUL2Q1KMD3 747 aaKnown RBP27.44■■□□□ 1.98
CKLF-204ENST00000362093 TSPOAP1O95153 1857 aa27.41■■□□□ 1.98
CKLF-204ENST00000362093 MAP3K4Q9Y6R4 1608 aa27.38■■□□□ 1.97
CKLF-204ENST00000362093 CLIP1P30622 1438 aa27.37■■□□□ 1.97
CKLF-204ENST00000362093 LOC105371045A0A1W2PR82 267 aa27.36■■□□□ 1.97
CKLF-204ENST00000362093 PPRC1Q5VV67 1664 aaKnown RBP27.36■■□□□ 1.97
CKLF-204ENST00000362093 PLEKHD1A6NEE1 506 aa27.35■■□□□ 1.97
CKLF-204ENST00000362093 ATP1B4Q9UN42 357 aaPredicted RBP27.34■■□□□ 1.97
CKLF-204ENST00000362093 CD109Q6YHK3 1445 aa27.33■■□□□ 1.97
CKLF-204ENST00000362093 HECW1Q76N89 1606 aa27.28■■□□□ 1.96
CKLF-204ENST00000362093 TEX14Q8IWB6 1497 aa27.28■■□□□ 1.96
CKLF-204ENST00000362093 CFAP43Q8NDM7 1665 aa27.27■■□□□ 1.96
CKLF-204ENST00000362093 CDK13Q14004 1512 aaKnown RBP27.27■■□□□ 1.96
CKLF-204ENST00000362093 MAGI3Q5TCQ9 1506 aa27.27■■□□□ 1.96
CKLF-204ENST00000362093 CASKIN1Q8WXD9 1431 aa27.25■■□□□ 1.95
CKLF-204ENST00000362093 KDM6BO15054 1643 aa27.24■■□□□ 1.95
CKLF-204ENST00000362093 ABCA9Q8IUA7 1624 aa27.23■■□□□ 1.95
CKLF-204ENST00000362093 CEP162Q5TB80 1403 aa27.23■■□□□ 1.95
CKLF-204ENST00000362093 CDK11AQ9UQ88 783 aaPredicted RBP27.2■■□□□ 1.94
CKLF-204ENST00000362093 COL17A1Q9UMD9 1497 aaPredicted RBP27.19■■□□□ 1.94
CKLF-204ENST00000362093 PCF11O94913 1555 aaKnown RBP27.18■■□□□ 1.94
CKLF-204ENST00000362093 ILDR1Q86SU0 546 aaPredicted RBP27.15■■□□□ 1.94
CKLF-204ENST00000362093 FYCO1Q9BQS8 1478 aa27.14■■□□□ 1.94
CKLF-204ENST00000362093 LRRIQ1Q96JM4 1722 aa27.14■■□□□ 1.94
CKLF-204ENST00000362093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.12■■□□□ 1.932e-6■■■■■ 51.7
CKLF-204ENST00000362093 CCDC18Q5T9S5 1454 aa27.12■■□□□ 1.93
CKLF-204ENST00000362093 TROQ12816 1431 aaPredicted RBP27.1■■□□□ 1.93
CKLF-204ENST00000362093 PHLDB1Q86UU1 1377 aa27.09■■□□□ 1.93
CKLF-204ENST00000362093 ARAP3Q8WWN8 1544 aa27.05■■□□□ 1.92
CKLF-204ENST00000362093 NEO1Q92859 1461 aa27.04■■□□□ 1.92
CKLF-204ENST00000362093 TTC37Q6PGP7 1564 aa27.03■■□□□ 1.92
CKLF-204ENST00000362093 PLCH2O75038 1416 aa27■■□□□ 1.91
CKLF-204ENST00000362093 KIF14Q15058 1648 aa26.98■■□□□ 1.91
CKLF-204ENST00000362093 FANCAO15360 1455 aa26.97■■□□□ 1.91
CKLF-204ENST00000362093 AKNAQ7Z591 1439 aa26.96■■□□□ 1.91
CKLF-204ENST00000362093 RAPGEF3O95398 923 aa26.93■■□□□ 1.9
CKLF-204ENST00000362093 VPS8Q8N3P4 1428 aa26.91■■□□□ 1.9
CKLF-204ENST00000362093 EFCAB2Q5VUJ9 269 aa26.91■■□□□ 1.9
CKLF-204ENST00000362093 CFAP74Q9C0B2 1584 aa26.88■■□□□ 1.89
CKLF-204ENST00000362093 MYO5CQ9NQX4 1742 aa26.87■■□□□ 1.89
CKLF-204ENST00000362093 DENND4BO75064 1496 aaPredicted RBP26.86■■□□□ 1.89
CKLF-204ENST00000362093 MTUS2Q5JR59 1369 aa26.85■■□□□ 1.89
CKLF-204ENST00000362093 SCAPERQ9BY12 1400 aa26.82■■□□□ 1.88
CKLF-204ENST00000362093 FRMPD1Q5SYB0 1578 aa26.81■■□□□ 1.88
CKLF-204ENST00000362093 ADGRL1O94910 1474 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms