RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 KIF13AQ9H1H9 1805 aa37.39■■■■□ 3.58
CD47-202ENST00000361309 IGF1RP08069 1367 aa37.19■■■■□ 3.54
CD47-202ENST00000361309 CUL7Q14999 1698 aa37.18■■■■□ 3.54
CD47-202ENST00000361309 KIF27Q86VH2 1401 aa37.17■■■■□ 3.54
CD47-202ENST00000361309 KIAA0586Q9BVV6 1533 aa37.15■■■■□ 3.54
CD47-202ENST00000361309 ADCY10Q96PN6 1610 aa37.14■■■■□ 3.54
CD47-202ENST00000361309 NPM1P06748 294 aaKnown RBP eCLIP37.12■■■■□ 3.53
CD47-202ENST00000361309 ABCC10Q5T3U5 1492 aa37.09■■■■□ 3.53
CD47-202ENST00000361309 MAPKBP1O60336 1514 aa37.09■■■■□ 3.53
CD47-202ENST00000361309 FAM69CQ0P6D2 419 aa37.07■■■■□ 3.52
CD47-202ENST00000361309 DIP2BQ9P265 1576 aa37.02■■■■□ 3.52
CD47-202ENST00000361309 CARMIL1Q5VZK9 1371 aa36.94■■■■□ 3.5
CD47-202ENST00000361309 TSPOAP1O95153 1857 aa36.89■■■■□ 3.5
CD47-202ENST00000361309 PTPRGP23470 1445 aa36.86■■■■□ 3.49
CD47-202ENST00000361309 TTBK1Q5TCY1 1321 aaPredicted RBP36.82■■■■□ 3.48
CD47-202ENST00000361309 IQGAP2Q13576 1575 aa36.79■■■■□ 3.48
CD47-202ENST00000361309 CARMIL2Q6F5E8 1435 aa36.79■■■■□ 3.48
CD47-202ENST00000361309 KDM6BO15054 1643 aa36.77■■■■□ 3.48
CD47-202ENST00000361309 TNIKQ9UKE5 1360 aa36.77■■■■□ 3.48
CD47-202ENST00000361309 ABCC2Q92887 1545 aa36.7■■■■□ 3.47
CD47-202ENST00000361309 DISP1Q96F81 1524 aa36.63■■■■□ 3.45
CD47-202ENST00000361309 ASXL2Q76L83 1435 aa36.6■■■■□ 3.45
CD47-202ENST00000361309 UHRF1BP1LA0JNW5 1464 aa36.6■■■■□ 3.45
CD47-202ENST00000361309 RAPGEF2Q9Y4G8 1499 aa36.58■■■■□ 3.45
CD47-202ENST00000361309 PLB1Q6P1J6 1458 aa36.57■■■■□ 3.45
CD47-202ENST00000361309 UACAQ9BZF9 1416 aa36.57■■■■□ 3.44
CD47-202ENST00000361309 PPRC1Q5VV67 1664 aaKnown RBP36.54■■■■□ 3.44
CD47-202ENST00000361309 GLI2P10070 1586 aa36.54■■■■□ 3.44
CD47-202ENST00000361309 UGGT2Q9NYU1 1516 aa36.53■■■■□ 3.44
CD47-202ENST00000361309 KDM4FA0A1W2PPD8 638 aa36.49■■■■□ 3.43
CD47-202ENST00000361309 KIAA0556O60303 1618 aa36.46■■■■□ 3.43
CD47-202ENST00000361309 KDM5BQ9UGL1 1544 aa36.44■■■■□ 3.42
CD47-202ENST00000361309 ZCCHC11Q5TAX3 1644 aaKnown RBP36.43■■■■□ 3.42
CD47-202ENST00000361309 CTTNBP2Q8WZ74 1663 aa36.39■■■■□ 3.42
CD47-202ENST00000361309 EPRSP07814 1512 aaKnown RBP36.39■■■■□ 3.42
CD47-202ENST00000361309 MAP3K4Q9Y6R4 1608 aa36.37■■■■□ 3.41
CD47-202ENST00000361309 COL17A1Q9UMD9 1497 aaPredicted RBP36.26■■■■□ 3.4
CD47-202ENST00000361309 TEX14Q8IWB6 1497 aa36.24■■■■□ 3.39
CD47-202ENST00000361309 WDR7Q9Y4E6 1490 aa36.2■■■■□ 3.39
CD47-202ENST00000361309 GOLGA3Q08378 1498 aa36.19■■■■□ 3.38
CD47-202ENST00000361309 ADGRL1O94910 1474 aa36.15■■■■□ 3.38
CD47-202ENST00000361309 ABCA8O94911 1581 aa36.15■■■■□ 3.38
CD47-202ENST00000361309 PRXQ9BXM0 1461 aa36.13■■■■□ 3.37
CD47-202ENST00000361309 CFAP43Q8NDM7 1665 aa36.07■■■■□ 3.36
CD47-202ENST00000361309 KCNH8Q96L42 1107 aa36.04■■■■□ 3.36
CD47-202ENST00000361309 CD109Q6YHK3 1445 aa36.01■■■■□ 3.36
CD47-202ENST00000361309 MAGI3Q5TCQ9 1506 aa35.99■■■■□ 3.35
CD47-202ENST00000361309 P3H3Q8IVL6 736 aa35.9■■■■□ 3.34
CD47-202ENST00000361309 ARID3CA6NKF2 412 aa35.86■■■■□ 3.33
CD47-202ENST00000361309 FAM9AQ8IZU1 332 aaPredicted RBP35.85■■■■□ 3.33
CD47-202ENST00000361309 ATP10BO94823 1461 aa35.83■■■■□ 3.33
CD47-202ENST00000361309 SAMD9Q5K651 1589 aa35.8■■■■□ 3.32
CD47-202ENST00000361309 CSRNP3Q8WYN3 585 aa35.79■■■■□ 3.32
CD47-202ENST00000361309 HECW2Q9P2P5 1572 aa35.76■■■■□ 3.31
CD47-202ENST00000361309 KIF21BO75037 1637 aa35.74■■■■□ 3.31
CD47-202ENST00000361309 ARAP3Q8WWN8 1544 aa35.73■■■■□ 3.31
CD47-202ENST00000361309 ABCA9Q8IUA7 1624 aa35.72■■■■□ 3.31
CD47-202ENST00000361309 RAPGEF6Q8TEU7 1601 aa35.72■■■■□ 3.31
CD47-202ENST00000361309 ILDR1Q86SU0 546 aaPredicted RBP35.63■■■■□ 3.29
CD47-202ENST00000361309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.6■■■■□ 3.29
CD47-202ENST00000361309 HNRNPUL2Q1KMD3 747 aaKnown RBP35.6■■■■□ 3.29
CD47-202ENST00000361309 RANGAP1P46060 587 aaPredicted RBP35.59■■■■□ 3.29
CD47-202ENST00000361309 PHLDB1Q86UU1 1377 aa35.59■■■■□ 3.29
CD47-202ENST00000361309 EEA1Q15075 1411 aa35.57■■■■□ 3.29
CD47-202ENST00000361309 NUP153P49790 1475 aaKnown RBP35.56■■■■□ 3.28
CD47-202ENST00000361309 FHOD3Q2V2M9 1422 aa35.54■■■■□ 3.28
CD47-202ENST00000361309 NEO1Q92859 1461 aa35.53■■■■□ 3.28
CD47-202ENST00000361309 RAPGEF3O95398 923 aa35.52■■■■□ 3.28
CD47-202ENST00000361309 FRMPD1Q5SYB0 1578 aa35.45■■■■□ 3.27
CD47-202ENST00000361309 ADAMTSL3P82987 1691 aa35.45■■■■□ 3.27
CD47-202ENST00000361309 PLEKHD1A6NEE1 506 aa35.39■■■■□ 3.26
CD47-202ENST00000361309 PTPRMP28827 1452 aa35.36■■■■□ 3.25
CD47-202ENST00000361309 BCORL1Q5H9F3 1711 aa35.36■■■■□ 3.25
CD47-202ENST00000361309 EFCAB5A4FU69 1503 aa35.36■■■■□ 3.25
CD47-202ENST00000361309 RICTORQ6R327 1708 aa35.33■■■■□ 3.25
CD47-202ENST00000361309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.31■■■■□ 3.248e-9■■■■■ 57.3
CD47-202ENST00000361309 CFAP74Q9C0B2 1584 aa35.29■■■■□ 3.24
CD47-202ENST00000361309 ARID4BQ4LE39 1312 aaPredicted RBP35.29■■■■□ 3.24
CD47-202ENST00000361309 AKNAQ7Z591 1439 aa35.28■■■■□ 3.24
CD47-202ENST00000361309 DENND4BO75064 1496 aaPredicted RBP35.28■■■■□ 3.24
CD47-202ENST00000361309 MADDQ8WXG6 1647 aa35.28■■■■□ 3.24
CD47-202ENST00000361309 TTC37Q6PGP7 1564 aa35.27■■■■□ 3.24
CD47-202ENST00000361309 FANCAO15360 1455 aa35.27■■■■□ 3.24
CD47-202ENST00000361309 ARHGEF40Q8TER5 1519 aa35.27■■■■□ 3.24
CD47-202ENST00000361309 CDK13Q14004 1512 aaKnown RBP35.22■■■■□ 3.23
CD47-202ENST00000361309 RIMS1Q86UR5 1692 aaKnown RBP35.17■■■■□ 3.22
CD47-202ENST00000361309 EHMT2Q96KQ7 1210 aa35.14■■■■□ 3.22
CD47-202ENST00000361309 ZMYM4Q5VZL5 1548 aa35.13■■■■□ 3.21
CD47-202ENST00000361309 UBTFP17480 764 aaKnown RBP35.1■■■■□ 3.21
CD47-202ENST00000361309 SIGLEC1Q9BZZ2 1709 aa35.09■■■■□ 3.21
CD47-202ENST00000361309 PCF11O94913 1555 aaKnown RBP35.09■■■■□ 3.21
CD47-202ENST00000361309 ZFYVE16Q7Z3T8 1539 aa35.09■■■■□ 3.21
CD47-202ENST00000361309 YEATS2Q9ULM3 1422 aa35.06■■■■□ 3.2
CD47-202ENST00000361309 ATP1B4Q9UN42 357 aaPredicted RBP35.06■■■■□ 3.2
CD47-202ENST00000361309 HECW1Q76N89 1606 aa35.06■■■■□ 3.2
CD47-202ENST00000361309 LMTK3Q96Q04 1460 aa35.05■■■■□ 3.2
CD47-202ENST00000361309 PLCH2O75038 1416 aa35.05■■■■□ 3.2
CD47-202ENST00000361309 FMN1Q68DA7 1419 aa35.04■■■■□ 3.2
CD47-202ENST00000361309 POGZQ7Z3K3 1410 aa35.03■■■■□ 3.2
CD47-202ENST00000361309 MYO5CQ9NQX4 1742 aa35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms