RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 FHOD3Q2V2M9 1422 aa30.08■■■□□ 2.41
CHD1L-201ENST00000361293 PCF11O94913 1555 aaKnown RBP30.08■■■□□ 2.41
CHD1L-201ENST00000361293 MAP3K1Q13233 1512 aa30.07■■■□□ 2.4
CHD1L-201ENST00000361293 TARBP1Q13395 1621 aaKnown RBP30.06■■■□□ 2.4
CHD1L-201ENST00000361293 FHAD1B1AJZ9 1412 aa30.06■■■□□ 2.4
CHD1L-201ENST00000361293 EFCAB5A4FU69 1503 aa30.02■■■□□ 2.4
CHD1L-201ENST00000361293 CCNB3Q8WWL7 1395 aa30.02■■■□□ 2.4
CHD1L-201ENST00000361293 LRRC9Q6ZRR7 1453 aa30■■■□□ 2.39
CHD1L-201ENST00000361293 CFAP43Q8NDM7 1665 aa29.97■■■□□ 2.39
CHD1L-201ENST00000361293 ATP1B4Q9UN42 357 aaPredicted RBP29.93■■■□□ 2.38
CHD1L-201ENST00000361293 MRC2Q9UBG0 1479 aa29.92■■■□□ 2.38
CHD1L-201ENST00000361293 FYCO1Q9BQS8 1478 aa29.9■■■□□ 2.38
CHD1L-201ENST00000361293 PHLDB1Q86UU1 1377 aa29.89■■■□□ 2.38
CHD1L-201ENST00000361293 DHX57Q6P158 1386 aaKnown RBP29.88■■■□□ 2.37
CHD1L-201ENST00000361293 CASKIN1Q8WXD9 1431 aa29.88■■■□□ 2.37
CHD1L-201ENST00000361293 ITGAEP38570 1179 aa29.87■■■□□ 2.37
CHD1L-201ENST00000361293 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
CHD1L-201ENST00000361293 AQRO60306 1485 aaKnown RBP eCLIP29.86■■■□□ 2.376e-7■■■■■ 27.9
CHD1L-201ENST00000361293 SAMD9Q5K651 1589 aa29.85■■■□□ 2.37
CHD1L-201ENST00000361293 SNAPC4Q5SXM2 1469 aa29.81■■■□□ 2.36
CHD1L-201ENST00000361293 DIEXFQ68CQ4 756 aaKnown RBP29.81■■■□□ 2.36
CHD1L-201ENST00000361293 FMN1Q68DA7 1419 aa29.81■■■□□ 2.36
CHD1L-201ENST00000361293 ZNF316A6NFI3 1004 aaPredicted RBP29.76■■■□□ 2.35
CHD1L-201ENST00000361293 ADAMTS12P58397 1594 aa29.74■■■□□ 2.35
CHD1L-201ENST00000361293 CLSPNQ9HAW4 1339 aa29.72■■■□□ 2.35
CHD1L-201ENST00000361293 WDR62O43379 1518 aa29.72■■■□□ 2.35
CHD1L-201ENST00000361293 ZNF608Q9ULD9 1512 aaPredicted RBP29.72■■■□□ 2.35
CHD1L-201ENST00000361293 LRRIQ1Q96JM4 1722 aa29.71■■■□□ 2.35
CHD1L-201ENST00000361293 GRIN2BQ13224 1484 aa29.68■■■□□ 2.34
CHD1L-201ENST00000361293 FAM50AQ14320 339 aaKnown RBP29.68■■■□□ 2.34
CHD1L-201ENST00000361293 IFT140Q96RY7 1462 aa29.66■■■□□ 2.34
CHD1L-201ENST00000361293 RAB3GAP2Q9H2M9 1393 aa29.66■■■□□ 2.34
CHD1L-201ENST00000361293 IQGAP2Q13576 1575 aa29.61■■■□□ 2.33
CHD1L-201ENST00000361293 MTUS2Q5JR59 1369 aa29.57■■■□□ 2.32
CHD1L-201ENST00000361293 SETD5Q9C0A6 1442 aa29.56■■■□□ 2.32
CHD1L-201ENST00000361293 ERCC6Q03468 1493 aa29.55■■■□□ 2.32
CHD1L-201ENST00000361293 THOC2Q8NI27 1593 aaKnown RBP29.55■■■□□ 2.32
CHD1L-201ENST00000361293 FGD6Q6ZV73 1430 aa29.52■■■□□ 2.32
CHD1L-201ENST00000361293 EIF4G3O43432 1585 aaKnown RBP29.52■■■□□ 2.32
CHD1L-201ENST00000361293 MAPKBP1O60336 1514 aa29.5■■■□□ 2.31
CHD1L-201ENST00000361293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.48■■■□□ 2.31
CHD1L-201ENST00000361293 NCOA2Q15596 1464 aa29.47■■■□□ 2.31
CHD1L-201ENST00000361293 MAGI3Q5TCQ9 1506 aa29.46■■■□□ 2.31
CHD1L-201ENST00000361293 EHBP1L1Q8N3D4 1523 aa29.43■■■□□ 2.3
CHD1L-201ENST00000361293 UGGT2Q9NYU1 1516 aa29.43■■■□□ 2.3
CHD1L-201ENST00000361293 SUPT6HQ7KZ85 1726 aaKnown RBP29.41■■■□□ 2.3
CHD1L-201ENST00000361293 HECW1Q76N89 1606 aa29.41■■■□□ 2.3
CHD1L-201ENST00000361293 CCDC18Q5T9S5 1454 aa29.39■■■□□ 2.3
CHD1L-201ENST00000361293 GRIN2AQ12879 1464 aa29.39■■■□□ 2.3
CHD1L-201ENST00000361293 MYOM3Q5VTT5 1437 aa29.38■■■□□ 2.29
CHD1L-201ENST00000361293 KIAA0586Q9BVV6 1533 aa29.37■■■□□ 2.29
CHD1L-201ENST00000361293 EPRSP07814 1512 aaKnown RBP29.36■■■□□ 2.29
CHD1L-201ENST00000361293 PTPRKQ15262 1439 aa29.36■■■□□ 2.29
CHD1L-201ENST00000361293 CDK13Q14004 1512 aaKnown RBP29.35■■■□□ 2.29
CHD1L-201ENST00000361293 ARHGEF11O15085 1522 aa29.34■■■□□ 2.29
CHD1L-201ENST00000361293 DISP1Q96F81 1524 aa29.33■■■□□ 2.29
CHD1L-201ENST00000361293 KIAA0556O60303 1618 aa29.32■■■□□ 2.28
CHD1L-201ENST00000361293 ARID3CA6NKF2 412 aa29.31■■■□□ 2.28
CHD1L-201ENST00000361293 MAGI1Q96QZ7 1491 aaPredicted RBP29.28■■■□□ 2.28
CHD1L-201ENST00000361293 MIER1Q8N108 512 aa29.27■■■□□ 2.28
CHD1L-201ENST00000361293 PTPN23Q9H3S7 1636 aa29.27■■■□□ 2.28
CHD1L-201ENST00000361293 SCAF1Q9H7N4 1312 aaKnown RBP29.25■■■□□ 2.27
CHD1L-201ENST00000361293 SIN3AQ96ST3 1273 aa29.23■■■□□ 2.27
CHD1L-201ENST00000361293 CEP170Q5SW79 1584 aa29.23■■■□□ 2.27
CHD1L-201ENST00000361293 SYNJ2O15056 1496 aa29.22■■■□□ 2.27
CHD1L-201ENST00000361293 HFM1A2PYH4 1435 aa29.21■■■□□ 2.27
CHD1L-201ENST00000361293 NEUROD1Q13562 356 aa29.21■■■□□ 2.27
CHD1L-201ENST00000361293 CHMP7Q8WUX9 453 aaPredicted RBP29.21■■■□□ 2.27
CHD1L-201ENST00000361293 FBLN2P98095 1184 aa29.17■■■□□ 2.26
CHD1L-201ENST00000361293 ACIN1Q9UKV3 1341 aaKnown RBP29.17■■■□□ 2.26
CHD1L-201ENST00000361293 NUP153P49790 1475 aaKnown RBP29.16■■■□□ 2.26
CHD1L-201ENST00000361293 NAIPQ13075 1403 aa29.16■■■□□ 2.26
CHD1L-201ENST00000361293 TCOF1Q13428 1488 aaKnown RBP29.15■■■□□ 2.26
CHD1L-201ENST00000361293 RAPGEF6Q8TEU7 1601 aa29.13■■■□□ 2.25
CHD1L-201ENST00000361293 NUP160Q12769 1436 aa29.08■■■□□ 2.25
CHD1L-201ENST00000361293 UACAQ9BZF9 1416 aa29.07■■■□□ 2.24
CHD1L-201ENST00000361293 CENPBP07199 599 aaPredicted RBP29.06■■■□□ 2.24
CHD1L-201ENST00000361293 CHIC2Q9UKJ5 165 aa29.05■■■□□ 2.24
CHD1L-201ENST00000361293 MIA2Q96PC5 1412 aa29.05■■■□□ 2.24
CHD1L-201ENST00000361293 YTHDC1Q96MU7 727 aaKnown RBP29.04■■■□□ 2.24
CHD1L-201ENST00000361293 RRP7BPQ9NSQ0 103 aa29.03■■■□□ 2.24
CHD1L-201ENST00000361293 PLB1Q6P1J6 1458 aa29.03■■■□□ 2.24
CHD1L-201ENST00000361293 JPH4Q96JJ6 628 aa29■■■□□ 2.23
CHD1L-201ENST00000361293 GCC2Q8IWJ2 1684 aa28.98■■■□□ 2.23
CHD1L-201ENST00000361293 KDM6BO15054 1643 aa28.96■■■□□ 2.23
CHD1L-201ENST00000361293 TIMELESSQ9UNS1 1208 aa28.95■■■□□ 2.22
CHD1L-201ENST00000361293 PRG4Q92954 1404 aaPredicted RBP28.94■■■□□ 2.22
CHD1L-201ENST00000361293 CARMIL2Q6F5E8 1435 aa28.94■■■□□ 2.22
CHD1L-201ENST00000361293 AKNAQ7Z591 1439 aa28.91■■■□□ 2.22
CHD1L-201ENST00000361293 ZNF644Q9H582 1327 aaPredicted RBP28.91■■■□□ 2.22
CHD1L-201ENST00000361293 CDK11AQ9UQ88 783 aaPredicted RBP28.91■■■□□ 2.22
CHD1L-201ENST00000361293 PPP1R15AO75807 674 aaPredicted RBP28.9■■■□□ 2.22
CHD1L-201ENST00000361293 TROQ12816 1431 aaPredicted RBP28.89■■■□□ 2.21
CHD1L-201ENST00000361293 DAPK1P53355 1430 aa28.87■■■□□ 2.21
CHD1L-201ENST00000361293 DENND4BO75064 1496 aaPredicted RBP28.86■■■□□ 2.21
CHD1L-201ENST00000361293 DNMT1P26358 1616 aaKnown RBP28.85■■■□□ 2.21
CHD1L-201ENST00000361293 KIF14Q15058 1648 aa28.85■■■□□ 2.21
CHD1L-201ENST00000361293 TONSLQ96HA7 1378 aa28.84■■■□□ 2.21
CHD1L-201ENST00000361293 ABCC5O15440 1437 aa28.84■■■□□ 2.21
CHD1L-201ENST00000361293 GTF3C3Q9Y5Q9 886 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms