RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 NISCHQ9Y2I1 1504 aa43.29■■■■■ 4.52
CHD1L-201ENST00000361293 CCDC180Q9P1Z9 1646 aa37.13■■■■□ 3.53
CHD1L-201ENST00000361293 ZCCHC6Q5VYS8 1495 aaKnown RBP36.53■■■■□ 3.44
CHD1L-201ENST00000361293 SHROOM4Q9ULL8 1493 aa36.36■■■■□ 3.41
CHD1L-201ENST00000361293 DCAF8L2P0C7V8 631 aa35.82■■■■□ 3.33
CHD1L-201ENST00000361293 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.28
CHD1L-201ENST00000361293 SUPT5HO00267 1087 aaKnown RBP35.37■■■■□ 3.25
CHD1L-201ENST00000361293 MYO15BQ96JP2 1530 aa34.75■■■■□ 3.15
CHD1L-201ENST00000361293 ABCC9O60706 1549 aa34.72■■■■□ 3.15
CHD1L-201ENST00000361293 SCRIBQ14160 1630 aa34.62■■■■□ 3.13
CHD1L-201ENST00000361293 NACADO15069 1562 aa34.4■■■■□ 3.1
CHD1L-201ENST00000361293 CHIC1Q5VXU3 224 aa34.2■■■■□ 3.06
CHD1L-201ENST00000361293 RSF1Q96T23 1441 aaPredicted RBP34.02■■■■□ 3.04
CHD1L-201ENST00000361293 RB1CC1Q8TDY2 1594 aa33.95■■■■□ 3.02
CHD1L-201ENST00000361293 CECR2Q9BXF3 1484 aa33.77■■■■□ 3
CHD1L-201ENST00000361293 MROH2BQ7Z745 1585 aa33.62■■■□□ 2.97
CHD1L-201ENST00000361293 UNC13AQ9UPW8 1703 aa33.49■■■□□ 2.95
CHD1L-201ENST00000361293 WIZO95785 1651 aa33.41■■■□□ 2.94
CHD1L-201ENST00000361293 BAZ1AQ9NRL2 1556 aaPredicted RBP33.29■■■□□ 2.92
CHD1L-201ENST00000361293 LOC105371045A0A1W2PR82 267 aa33.11■■■□□ 2.89
CHD1L-201ENST00000361293 SMARCA4P51532 1647 aa33.1■■■□□ 2.89
CHD1L-201ENST00000361293 BICRAQ9NZM4 1560 aa33.08■■■□□ 2.89
CHD1L-201ENST00000361293 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.882e-6■■□□□ 13.5
CHD1L-201ENST00000361293 TRIM41Q8WV44 630 aa33.01■■■□□ 2.88
CHD1L-201ENST00000361293 TOP2AP11388 1531 aaKnown RBP32.9■■■□□ 2.86
CHD1L-201ENST00000361293 EIF4G1Q04637 1599 aaKnown RBP32.8■■■□□ 2.84
CHD1L-201ENST00000361293 CCDC88BA6NC98 1476 aa32.71■■■□□ 2.83
CHD1L-201ENST00000361293 SMARCA2P51531 1590 aa32.7■■■□□ 2.83
CHD1L-201ENST00000361293 FAM9AQ8IZU1 332 aaPredicted RBP32.68■■■□□ 2.82
CHD1L-201ENST00000361293 PEG3Q9GZU2 1588 aa32.53■■■□□ 2.8
CHD1L-201ENST00000361293 PCGF6Q9BYE7 350 aa32.5■■■□□ 2.79
CHD1L-201ENST00000361293 ABCC8Q09428 1581 aa32.45■■■□□ 2.79
CHD1L-201ENST00000361293 EHMT2Q96KQ7 1210 aa32.38■■■□□ 2.77
CHD1L-201ENST00000361293 ATAD2BQ9ULI0 1458 aa32.35■■■□□ 2.77
CHD1L-201ENST00000361293 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
CHD1L-201ENST00000361293 HRCP23327 699 aa32.16■■■□□ 2.74
CHD1L-201ENST00000361293 TRIM26Q12899 539 aaPredicted RBP32.05■■■□□ 2.72
CHD1L-201ENST00000361293 SOGA1O94964 1423 aa32.01■■■□□ 2.71
CHD1L-201ENST00000361293 WRNQ14191 1432 aaPredicted RBP eCLIP31.96■■■□□ 2.71
CHD1L-201ENST00000361293 RUSC2Q8N2Y8 1516 aa31.89■■■□□ 2.7
CHD1L-201ENST00000361293 SYNJ1O43426 1573 aa31.87■■■□□ 2.69
CHD1L-201ENST00000361293 NCAPD3P42695 1498 aa31.83■■■□□ 2.69
CHD1L-201ENST00000361293 HMGXB3Q12766 1538 aa31.81■■■□□ 2.68
CHD1L-201ENST00000361293 EEA1Q15075 1411 aa31.77■■■□□ 2.68
CHD1L-201ENST00000361293 CSRNP3Q8WYN3 585 aa31.73■■■□□ 2.67
CHD1L-201ENST00000361293 PPARGC1BQ86YN6 1023 aaKnown RBP31.61■■■□□ 2.65
CHD1L-201ENST00000361293 CEP162Q5TB80 1403 aa31.6■■■□□ 2.65
CHD1L-201ENST00000361293 TNIKQ9UKE5 1360 aa31.59■■■□□ 2.65
CHD1L-201ENST00000361293 TOP2BQ02880 1626 aa31.53■■■□□ 2.64
CHD1L-201ENST00000361293 GOLGA3Q08378 1498 aa31.52■■■□□ 2.64
CHD1L-201ENST00000361293 UBTFP17480 764 aaKnown RBP31.5■■■□□ 2.63
CHD1L-201ENST00000361293 BIVM-ERCC5R4GMW8 1640 aa31.45■■■□□ 2.63
CHD1L-201ENST00000361293 CFTRP13569 1480 aa31.42■■■□□ 2.62
CHD1L-201ENST00000361293 KIF21BO75037 1637 aa31.41■■■□□ 2.62
CHD1L-201ENST00000361293 CEP164Q9UPV0 1460 aa31.41■■■□□ 2.62
CHD1L-201ENST00000361293 CUX1P39880 1505 aa31.34■■■□□ 2.61
CHD1L-201ENST00000361293 CC2D2AQ9P2K1 1620 aa31.32■■■□□ 2.6
CHD1L-201ENST00000361293 RAPGEF2Q9Y4G8 1499 aa31.27■■■□□ 2.6
CHD1L-201ENST00000361293 PRDM2Q13029 1718 aa31.21■■■□□ 2.59
CHD1L-201ENST00000361293 TTBK1Q5TCY1 1321 aaPredicted RBP31.2■■■□□ 2.59
CHD1L-201ENST00000361293 CADPSQ9ULU8 1353 aa31.14■■■□□ 2.58
CHD1L-201ENST00000361293 CLIP1P30622 1438 aa31.12■■■□□ 2.57
CHD1L-201ENST00000361293 PRXQ9BXM0 1461 aa31.06■■■□□ 2.56
CHD1L-201ENST00000361293 ZEB1P37275 1124 aaPredicted RBP31.05■■■□□ 2.56
CHD1L-201ENST00000361293 ERICH3Q5RHP9 1530 aa31■■■□□ 2.55
CHD1L-201ENST00000361293 KIF27Q86VH2 1401 aa31■■■□□ 2.55
CHD1L-201ENST00000361293 RANGAP1P46060 587 aaPredicted RBP30.98■■■□□ 2.55
CHD1L-201ENST00000361293 VPS8Q8N3P4 1428 aa30.93■■■□□ 2.54
CHD1L-201ENST00000361293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.88■■■□□ 2.53
CHD1L-201ENST00000361293 FGD5Q6ZNL6 1462 aa30.85■■■□□ 2.53
CHD1L-201ENST00000361293 FANCD2Q9BXW9 1451 aa30.85■■■□□ 2.53
CHD1L-201ENST00000361293 CUX2O14529 1486 aa30.83■■■□□ 2.53
CHD1L-201ENST00000361293 NESP48681 1621 aa30.81■■■□□ 2.52
CHD1L-201ENST00000361293 ARAP1Q96P48 1450 aa30.74■■■□□ 2.51
CHD1L-201ENST00000361293 CCER1Q8TC90 406 aaPredicted RBP30.72■■■□□ 2.51
CHD1L-201ENST00000361293 IGF1RP08069 1367 aa30.72■■■□□ 2.51
CHD1L-201ENST00000361293 DNMBPQ6XZF7 1577 aa30.65■■■□□ 2.5
CHD1L-201ENST00000361293 APLP2Q06481 763 aa30.64■■■□□ 2.5
CHD1L-201ENST00000361293 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
CHD1L-201ENST00000361293 TOPBP1Q92547 1522 aa30.61■■■□□ 2.49
CHD1L-201ENST00000361293 RAD54L2Q9Y4B4 1467 aa30.58■■■□□ 2.49
CHD1L-201ENST00000361293 CARMIL1Q5VZK9 1371 aa30.57■■■□□ 2.48
CHD1L-201ENST00000361293 POLA1P09884 1462 aaPredicted RBP30.56■■■□□ 2.48
CHD1L-201ENST00000361293 ARHGAP35Q9NRY4 1499 aa30.56■■■□□ 2.48
CHD1L-201ENST00000361293 LAMC3Q9Y6N6 1575 aa30.56■■■□□ 2.48
CHD1L-201ENST00000361293 ABCA10Q8WWZ4 1543 aa30.49■■■□□ 2.47
CHD1L-201ENST00000361293 HNRNPUL2Q1KMD3 747 aaKnown RBP30.48■■■□□ 2.47
CHD1L-201ENST00000361293 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
CHD1L-201ENST00000361293 KANK4Q5T7N3 995 aaPredicted RBP30.44■■■□□ 2.46
CHD1L-201ENST00000361293 PDS5BQ9NTI5 1447 aa30.33■■■□□ 2.45
CHD1L-201ENST00000361293 KIF21AQ7Z4S6 1674 aa30.32■■■□□ 2.44
CHD1L-201ENST00000361293 WDR97A6NE52 1622 aa30.32■■■□□ 2.44
CHD1L-201ENST00000361293 CUL7Q14999 1698 aa30.25■■■□□ 2.43
CHD1L-201ENST00000361293 TDRD9Q8NDG6 1382 aaKnown RBP30.21■■■□□ 2.43
CHD1L-201ENST00000361293 ABCA5Q8WWZ7 1642 aa30.19■■■□□ 2.42
CHD1L-201ENST00000361293 P3H3Q8IVL6 736 aa30.16■■■□□ 2.42
CHD1L-201ENST00000361293 RRBP1Q9P2E9 1410 aaKnown RBP30.14■■■□□ 2.42
CHD1L-201ENST00000361293 TIAM1Q13009 1591 aa30.13■■■□□ 2.41
CHD1L-201ENST00000361293 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
CHD1L-201ENST00000361293 CTTNBP2Q8WZ74 1663 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms