RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
UBA3-202ENST00000361055 CHMP7Q8WUX9 453 aaPredicted RBP18.98■□□□□ 0.63
UBA3-202ENST00000361055 CTTNBP2Q8WZ74 1663 aa18.96■□□□□ 0.63
UBA3-202ENST00000361055 CHD1O14646 1710 aa18.94■□□□□ 0.62
UBA3-202ENST00000361055 FBLN2P98095 1184 aa18.93■□□□□ 0.62
UBA3-202ENST00000361055 CEP162Q5TB80 1403 aa18.93■□□□□ 0.62
UBA3-202ENST00000361055 CCER1Q8TC90 406 aaPredicted RBP18.92■□□□□ 0.62
UBA3-202ENST00000361055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.91■□□□□ 0.62
UBA3-202ENST00000361055 CEP170Q5SW79 1584 aa18.87■□□□□ 0.61
UBA3-202ENST00000361055 NUP160Q12769 1436 aa18.86■□□□□ 0.61
UBA3-202ENST00000361055 KIAA0586Q9BVV6 1533 aa18.83■□□□□ 0.61
UBA3-202ENST00000361055 IQGAP2Q13576 1575 aa18.83■□□□□ 0.6
UBA3-202ENST00000361055 CLIP1P30622 1438 aa18.81■□□□□ 0.6
UBA3-202ENST00000361055 RANGAP1P46060 587 aaPredicted RBP18.79■□□□□ 0.6
UBA3-202ENST00000361055 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
UBA3-202ENST00000361055 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
UBA3-202ENST00000361055 UGGT2Q9NYU1 1516 aa18.74■□□□□ 0.59
UBA3-202ENST00000361055 SAMD9Q5K651 1589 aa18.72■□□□□ 0.59
UBA3-202ENST00000361055 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
UBA3-202ENST00000361055 CLASP1Q7Z460 1538 aa18.71■□□□□ 0.59
UBA3-202ENST00000361055 JPH4Q96JJ6 628 aa18.69■□□□□ 0.58
UBA3-202ENST00000361055 ARAP1Q96P48 1450 aa18.67■□□□□ 0.58
UBA3-202ENST00000361055 OSCARQ8IYS5 282 aa18.67■□□□□ 0.58
UBA3-202ENST00000361055 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
UBA3-202ENST00000361055 PELP1Q8IZL8 1130 aaKnown RBP18.65■□□□□ 0.58
UBA3-202ENST00000361055 TTBK1Q5TCY1 1321 aaPredicted RBP18.65■□□□□ 0.58
UBA3-202ENST00000361055 KIAA0556O60303 1618 aa18.65■□□□□ 0.58
UBA3-202ENST00000361055 DISP1Q96F81 1524 aa18.64■□□□□ 0.58
UBA3-202ENST00000361055 DIEXFQ68CQ4 756 aaKnown RBP18.64■□□□□ 0.57
UBA3-202ENST00000361055 P3H3Q8IVL6 736 aa18.64■□□□□ 0.57
UBA3-202ENST00000361055 FHOD3Q2V2M9 1422 aa18.62■□□□□ 0.57
UBA3-202ENST00000361055 CARMIL2Q6F5E8 1435 aa18.62■□□□□ 0.57
UBA3-202ENST00000361055 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
UBA3-202ENST00000361055 PRG4Q92954 1404 aaPredicted RBP18.59■□□□□ 0.57
UBA3-202ENST00000361055 ACIN1Q9UKV3 1341 aaKnown RBP18.59■□□□□ 0.57
UBA3-202ENST00000361055 FMN1Q68DA7 1419 aa18.57■□□□□ 0.56
UBA3-202ENST00000361055 ZNF316A6NFI3 1004 aaPredicted RBP18.52■□□□□ 0.56
UBA3-202ENST00000361055 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
UBA3-202ENST00000361055 CENPBP07199 599 aaPredicted RBP18.49■□□□□ 0.55
UBA3-202ENST00000361055 PCF11O94913 1555 aaKnown RBP18.49■□□□□ 0.55
UBA3-202ENST00000361055 NEUROD1Q13562 356 aa18.48■□□□□ 0.55
UBA3-202ENST00000361055 CASKIN1Q8WXD9 1431 aa18.47■□□□□ 0.55
UBA3-202ENST00000361055 APLP2Q06481 763 aa18.47■□□□□ 0.55
UBA3-202ENST00000361055 FYCO1Q9BQS8 1478 aa18.46■□□□□ 0.55
UBA3-202ENST00000361055 PTPRGP23470 1445 aa18.45■□□□□ 0.54
UBA3-202ENST00000361055 RAPGEF6Q8TEU7 1601 aa18.43■□□□□ 0.54
UBA3-202ENST00000361055 HNRNPUL2Q1KMD3 747 aaKnown RBP18.42■□□□□ 0.54
UBA3-202ENST00000361055 HECW1Q76N89 1606 aa18.42■□□□□ 0.54
UBA3-202ENST00000361055 ATP1B4Q9UN42 357 aaPredicted RBP18.4■□□□□ 0.54
UBA3-202ENST00000361055 PLB1Q6P1J6 1458 aa18.39■□□□□ 0.54
UBA3-202ENST00000361055 ABCA8O94911 1581 aa18.39■□□□□ 0.53
UBA3-202ENST00000361055 LRRIQ1Q96JM4 1722 aa18.38■□□□□ 0.53
UBA3-202ENST00000361055 MAP3K1Q13233 1512 aa18.38■□□□□ 0.53
UBA3-202ENST00000361055 ARHGEF11O15085 1522 aa18.37■□□□□ 0.53
UBA3-202ENST00000361055 CFAP43Q8NDM7 1665 aa18.36■□□□□ 0.53
UBA3-202ENST00000361055 TIAM1Q13009 1591 aa18.36■□□□□ 0.53
UBA3-202ENST00000361055 CCDC18Q5T9S5 1454 aa18.35■□□□□ 0.53
UBA3-202ENST00000361055 UACAQ9BZF9 1416 aa18.35■□□□□ 0.53
UBA3-202ENST00000361055 NUP153P49790 1475 aaKnown RBP18.34■□□□□ 0.53
UBA3-202ENST00000361055 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.52
UBA3-202ENST00000361055 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
UBA3-202ENST00000361055 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
UBA3-202ENST00000361055 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
UBA3-202ENST00000361055 GTF3C3Q9Y5Q9 886 aa18.31■□□□□ 0.52
UBA3-202ENST00000361055 ABCC2Q92887 1545 aa18.31■□□□□ 0.52
UBA3-202ENST00000361055 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
UBA3-202ENST00000361055 UHRF1BP1LA0JNW5 1464 aa18.29■□□□□ 0.52
UBA3-202ENST00000361055 CDK13Q14004 1512 aaKnown RBP18.28■□□□□ 0.52
UBA3-202ENST00000361055 LRRC9Q6ZRR7 1453 aa18.26■□□□□ 0.51
UBA3-202ENST00000361055 KANK4Q5T7N3 995 aaPredicted RBP18.26■□□□□ 0.51
UBA3-202ENST00000361055 ARID3CA6NKF2 412 aa18.25■□□□□ 0.51
UBA3-202ENST00000361055 ADCY10Q96PN6 1610 aa18.25■□□□□ 0.51
UBA3-202ENST00000361055 ATP10BO94823 1461 aa18.24■□□□□ 0.51
UBA3-202ENST00000361055 MTUS2Q5JR59 1369 aa18.22■□□□□ 0.51
UBA3-202ENST00000361055 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.51
UBA3-202ENST00000361055 EHBP1L1Q8N3D4 1523 aa18.21■□□□□ 0.51
UBA3-202ENST00000361055 KDM5BQ9UGL1 1544 aa18.21■□□□□ 0.51
UBA3-202ENST00000361055 MIER1Q8N108 512 aa18.2■□□□□ 0.5
UBA3-202ENST00000361055 MAGI3Q5TCQ9 1506 aa18.2■□□□□ 0.5
UBA3-202ENST00000361055 ZCCHC11Q5TAX3 1644 aaKnown RBP18.2■□□□□ 0.5
UBA3-202ENST00000361055 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
UBA3-202ENST00000361055 SUPT6HQ7KZ85 1726 aaKnown RBP18.16■□□□□ 0.5
UBA3-202ENST00000361055 DHX57Q6P158 1386 aaKnown RBP18.15■□□□□ 0.5
UBA3-202ENST00000361055 PLEKHD1A6NEE1 506 aa18.15■□□□□ 0.5
UBA3-202ENST00000361055 TROQ12816 1431 aaPredicted RBP18.14■□□□□ 0.49
UBA3-202ENST00000361055 RRBP1Q9P2E9 1410 aaKnown RBP18.14■□□□□ 0.49
UBA3-202ENST00000361055 DNAJC5Q9H3Z4 198 aa18.13■□□□□ 0.49
UBA3-202ENST00000361055 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
UBA3-202ENST00000361055 NCOA2Q15596 1464 aa18.1■□□□□ 0.49
UBA3-202ENST00000361055 KIF14Q15058 1648 aa18.08■□□□□ 0.48
UBA3-202ENST00000361055 YTHDC1Q96MU7 727 aaKnown RBP18.06■□□□□ 0.48
UBA3-202ENST00000361055 PHLDB1Q86UU1 1377 aa18.06■□□□□ 0.48
UBA3-202ENST00000361055 WDR7Q9Y4E6 1490 aa18.04■□□□□ 0.48
UBA3-202ENST00000361055 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
UBA3-202ENST00000361055 ASXL2Q76L83 1435 aa18.03■□□□□ 0.48
UBA3-202ENST00000361055 MAPKBP1O60336 1514 aa18.01■□□□□ 0.47
UBA3-202ENST00000361055 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
UBA3-202ENST00000361055 ABCC10Q5T3U5 1492 aa18■□□□□ 0.47
UBA3-202ENST00000361055 ITSN2Q9NZM3 1697 aa17.99■□□□□ 0.47
UBA3-202ENST00000361055 KCNH8Q96L42 1107 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms