RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 NISCHQ9Y2I1 1504 aa27.42■■□□□ 1.98
UBA3-202ENST00000361055 CCDC180Q9P1Z9 1646 aa24.13■■□□□ 1.45
UBA3-202ENST00000361055 ABCC9O60706 1549 aa23.01■■□□□ 1.27
UBA3-202ENST00000361055 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
UBA3-202ENST00000361055 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
UBA3-202ENST00000361055 DCAF8L2P0C7V8 631 aa22.67■■□□□ 1.22
UBA3-202ENST00000361055 MYO15BQ96JP2 1530 aa22.58■■□□□ 1.21
UBA3-202ENST00000361055 NACADO15069 1562 aa22.53■■□□□ 1.2
UBA3-202ENST00000361055 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
UBA3-202ENST00000361055 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
UBA3-202ENST00000361055 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
UBA3-202ENST00000361055 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
UBA3-202ENST00000361055 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
UBA3-202ENST00000361055 PABPN1Q86U42 306 aaKnown RBP eCLIP21.6■■□□□ 1.05
UBA3-202ENST00000361055 CECR2Q9BXF3 1484 aa21.29■■□□□ 1
UBA3-202ENST00000361055 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
UBA3-202ENST00000361055 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
UBA3-202ENST00000361055 SMARCA4P51532 1647 aa21.16■□□□□ 0.98
UBA3-202ENST00000361055 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.97
UBA3-202ENST00000361055 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
UBA3-202ENST00000361055 EIF4G1Q04637 1599 aaKnown RBP21.09■□□□□ 0.97
UBA3-202ENST00000361055 WIZO95785 1651 aa20.97■□□□□ 0.95
UBA3-202ENST00000361055 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
UBA3-202ENST00000361055 SMARCA2P51531 1590 aa20.88■□□□□ 0.93
UBA3-202ENST00000361055 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
UBA3-202ENST00000361055 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
UBA3-202ENST00000361055 NCAPD3P42695 1498 aa20.77■□□□□ 0.91
UBA3-202ENST00000361055 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
UBA3-202ENST00000361055 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
UBA3-202ENST00000361055 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
UBA3-202ENST00000361055 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
UBA3-202ENST00000361055 DNAJC5BQ9UF47 199 aa20.56■□□□□ 0.88
UBA3-202ENST00000361055 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
UBA3-202ENST00000361055 HRCP23327 699 aa20.32■□□□□ 0.84
UBA3-202ENST00000361055 CFTRP13569 1480 aa20.21■□□□□ 0.83
UBA3-202ENST00000361055 CADPSQ9ULU8 1353 aa20.2■□□□□ 0.82
UBA3-202ENST00000361055 PRDM2Q13029 1718 aa20.17■□□□□ 0.82
UBA3-202ENST00000361055 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
UBA3-202ENST00000361055 PCGF6Q9BYE7 350 aa20.14■□□□□ 0.81
UBA3-202ENST00000361055 NESP48681 1621 aa20.1■□□□□ 0.81
UBA3-202ENST00000361055 LOC105371045A0A1W2PR82 267 aa20.05■□□□□ 0.8
UBA3-202ENST00000361055 PDS5BQ9NTI5 1447 aa19.97■□□□□ 0.79
UBA3-202ENST00000361055 FANCD2Q9BXW9 1451 aa19.97■□□□□ 0.79
UBA3-202ENST00000361055 ABCC8Q09428 1581 aa19.96■□□□□ 0.79
UBA3-202ENST00000361055 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
UBA3-202ENST00000361055 WRNQ14191 1432 aaPredicted RBP eCLIP19.89■□□□□ 0.78
UBA3-202ENST00000361055 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.78
UBA3-202ENST00000361055 TRIM26Q12899 539 aaPredicted RBP19.85■□□□□ 0.77
UBA3-202ENST00000361055 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
UBA3-202ENST00000361055 SYNJ1O43426 1573 aa19.82■□□□□ 0.76
UBA3-202ENST00000361055 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
UBA3-202ENST00000361055 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
UBA3-202ENST00000361055 CUX1P39880 1505 aa19.8■□□□□ 0.76
UBA3-202ENST00000361055 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
UBA3-202ENST00000361055 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
UBA3-202ENST00000361055 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
UBA3-202ENST00000361055 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
UBA3-202ENST00000361055 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
UBA3-202ENST00000361055 PPARGC1BQ86YN6 1023 aaKnown RBP19.71■□□□□ 0.75
UBA3-202ENST00000361055 THOC2Q8NI27 1593 aaKnown RBP19.67■□□□□ 0.74
UBA3-202ENST00000361055 WDR62O43379 1518 aa19.65■□□□□ 0.74
UBA3-202ENST00000361055 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
UBA3-202ENST00000361055 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
UBA3-202ENST00000361055 ZEB1P37275 1124 aaPredicted RBP19.56■□□□□ 0.72
UBA3-202ENST00000361055 SOGA1O94964 1423 aa19.52■□□□□ 0.72
UBA3-202ENST00000361055 FAM9AQ8IZU1 332 aaPredicted RBP19.51■□□□□ 0.71
UBA3-202ENST00000361055 RAD54L2Q9Y4B4 1467 aa19.5■□□□□ 0.71
UBA3-202ENST00000361055 CUX2O14529 1486 aa19.48■□□□□ 0.71
UBA3-202ENST00000361055 ABCA10Q8WWZ4 1543 aa19.48■□□□□ 0.71
UBA3-202ENST00000361055 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
UBA3-202ENST00000361055 WDR97A6NE52 1622 aa19.47■□□□□ 0.71
UBA3-202ENST00000361055 EEA1Q15075 1411 aa19.46■□□□□ 0.71
UBA3-202ENST00000361055 IFT140Q96RY7 1462 aa19.44■□□□□ 0.7
UBA3-202ENST00000361055 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
UBA3-202ENST00000361055 KIF27Q86VH2 1401 aa19.43■□□□□ 0.7
UBA3-202ENST00000361055 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
UBA3-202ENST00000361055 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
UBA3-202ENST00000361055 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.69
UBA3-202ENST00000361055 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
UBA3-202ENST00000361055 ZNF608Q9ULD9 1512 aaPredicted RBP19.31■□□□□ 0.68
UBA3-202ENST00000361055 AQRO60306 1485 aaKnown RBP eCLIP19.28■□□□□ 0.681e-9■■■■■ 37.7
UBA3-202ENST00000361055 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
UBA3-202ENST00000361055 IGF1RP08069 1367 aa19.27■□□□□ 0.68
UBA3-202ENST00000361055 PBRM1Q86U86 1689 aa19.27■□□□□ 0.67
UBA3-202ENST00000361055 ERICH3Q5RHP9 1530 aa19.26■□□□□ 0.67
UBA3-202ENST00000361055 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
UBA3-202ENST00000361055 KIF21BO75037 1637 aa19.23■□□□□ 0.67
UBA3-202ENST00000361055 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
UBA3-202ENST00000361055 CUL7Q14999 1698 aa19.22■□□□□ 0.67
UBA3-202ENST00000361055 PRXQ9BXM0 1461 aa19.21■□□□□ 0.67
UBA3-202ENST00000361055 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
UBA3-202ENST00000361055 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
UBA3-202ENST00000361055 RAPGEF2Q9Y4G8 1499 aa19.13■□□□□ 0.65
UBA3-202ENST00000361055 ADAMTS12P58397 1594 aa19.12■□□□□ 0.65
UBA3-202ENST00000361055 SNAPC4Q5SXM2 1469 aa19.11■□□□□ 0.65
UBA3-202ENST00000361055 MAGI1Q96QZ7 1491 aaPredicted RBP19.11■□□□□ 0.65
UBA3-202ENST00000361055 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
UBA3-202ENST00000361055 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
UBA3-202ENST00000361055 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
UBA3-202ENST00000361055 TNIKQ9UKE5 1360 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms