RNA–Protein interactions for RNA: ENST00000360639.6

C15orf39-201, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C15orf39, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-201ENST00000360639 CUX1P39880 1505 aa16.69■□□□□ 0.26
C15orf39-201ENST00000360639 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
C15orf39-201ENST00000360639 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.268e-7■■■■□ 19.3
C15orf39-201ENST00000360639 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
C15orf39-201ENST00000360639 RRP7BPQ9NSQ0 103 aa16.65■□□□□ 0.26
C15orf39-201ENST00000360639 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
C15orf39-201ENST00000360639 FHOD3Q2V2M9 1422 aa16.64■□□□□ 0.25
C15orf39-201ENST00000360639 TSPY4P0CV99 314 aa16.64■□□□□ 0.25
C15orf39-201ENST00000360639 TSPY10P0CW01 314 aa16.64■□□□□ 0.25
C15orf39-201ENST00000360639 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
C15orf39-201ENST00000360639 DIEXFQ68CQ4 756 aaKnown RBP16.62■□□□□ 0.25
C15orf39-201ENST00000360639 JPH4Q96JJ6 628 aa16.62■□□□□ 0.25
C15orf39-201ENST00000360639 CFDP1Q9UEE9 299 aaPredicted RBP16.62■□□□□ 0.25
C15orf39-201ENST00000360639 TOP2BQ02880 1626 aa16.61■□□□□ 0.25
C15orf39-201ENST00000360639 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
C15orf39-201ENST00000360639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.24
C15orf39-201ENST00000360639 CARMIL2Q6F5E8 1435 aa16.56■□□□□ 0.24
C15orf39-201ENST00000360639 MRC2Q9UBG0 1479 aa16.56■□□□□ 0.24
C15orf39-201ENST00000360639 FMN1Q68DA7 1419 aa16.55■□□□□ 0.24
C15orf39-201ENST00000360639 CCNB3Q8WWL7 1395 aa16.54■□□□□ 0.24
C15orf39-201ENST00000360639 LAMC3Q9Y6N6 1575 aa16.52■□□□□ 0.24
C15orf39-201ENST00000360639 ZNF316A6NFI3 1004 aaPredicted RBP16.52■□□□□ 0.24
C15orf39-201ENST00000360639 DNMBPQ6XZF7 1577 aa16.49■□□□□ 0.23
C15orf39-201ENST00000360639 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
C15orf39-201ENST00000360639 TONSLQ96HA7 1378 aa16.47■□□□□ 0.23
C15orf39-201ENST00000360639 GRIN2BQ13224 1484 aa16.46■□□□□ 0.23
C15orf39-201ENST00000360639 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
C15orf39-201ENST00000360639 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
C15orf39-201ENST00000360639 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
C15orf39-201ENST00000360639 KIF21BO75037 1637 aa16.42■□□□□ 0.22
C15orf39-201ENST00000360639 ARHGAP35Q9NRY4 1499 aa16.41■□□□□ 0.22
C15orf39-201ENST00000360639 CHGAP10645 457 aaKnown RBP16.39■□□□□ 0.21
C15orf39-201ENST00000360639 ERICH3Q5RHP9 1530 aa16.39■□□□□ 0.21
C15orf39-201ENST00000360639 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
C15orf39-201ENST00000360639 ARAP1Q96P48 1450 aa16.36■□□□□ 0.21
C15orf39-201ENST00000360639 PTPRGP23470 1445 aa16.36■□□□□ 0.21
C15orf39-201ENST00000360639 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
C15orf39-201ENST00000360639 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
C15orf39-201ENST00000360639 ESF1Q9H501 851 aaKnown RBP16.34■□□□□ 0.21
C15orf39-201ENST00000360639 PLPPR3Q6T4P5 718 aa16.34■□□□□ 0.21
C15orf39-201ENST00000360639 KDM2AQ9Y2K7 1162 aa16.34■□□□□ 0.21
C15orf39-201ENST00000360639 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
C15orf39-201ENST00000360639 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
C15orf39-201ENST00000360639 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
C15orf39-201ENST00000360639 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
C15orf39-201ENST00000360639 BCANQ96GW7 911 aa16.27■□□□□ 0.2
C15orf39-201ENST00000360639 SETD5Q9C0A6 1442 aa16.27■□□□□ 0.19
C15orf39-201ENST00000360639 ANP32CO43423 234 aa16.26■□□□□ 0.19
C15orf39-201ENST00000360639 RGL3Q3MIN7 710 aa16.26■□□□□ 0.19
C15orf39-201ENST00000360639 HNRNPMP52272 730 aaKnown RBP eCLIP16.25■□□□□ 0.19
C15orf39-201ENST00000360639 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
C15orf39-201ENST00000360639 CYB5RLQ6IPT4 315 aa16.25■□□□□ 0.19
C15orf39-201ENST00000360639 DDX10Q13206 875 aaKnown RBP16.25■□□□□ 0.19
C15orf39-201ENST00000360639 CCDC18Q5T9S5 1454 aa16.24■□□□□ 0.19
C15orf39-201ENST00000360639 RAB3GAP2Q9H2M9 1393 aa16.24■□□□□ 0.19
C15orf39-201ENST00000360639 EFCAB2Q5VUJ9 269 aa16.24■□□□□ 0.19
C15orf39-201ENST00000360639 NEFLP07196 543 aa16.21■□□□□ 0.19
C15orf39-201ENST00000360639 FOXD1Q16676 465 aa16.21■□□□□ 0.19
C15orf39-201ENST00000360639 PRG4Q92954 1404 aaPredicted RBP16.2■□□□□ 0.18
C15orf39-201ENST00000360639 SENP3Q9H4L4 574 aaPredicted RBP16.19■□□□□ 0.18
C15orf39-201ENST00000360639 CASKIN1Q8WXD9 1431 aa16.19■□□□□ 0.18
C15orf39-201ENST00000360639 PHLDB1Q86UU1 1377 aa16.18■□□□□ 0.18
C15orf39-201ENST00000360639 ERICH6Q7L0X2 663 aa16.18■□□□□ 0.18
C15orf39-201ENST00000360639 CLSPNQ9HAW4 1339 aa16.17■□□□□ 0.18
C15orf39-201ENST00000360639 LRRC9Q6ZRR7 1453 aa16.16■□□□□ 0.18
C15orf39-201ENST00000360639 ZNF644Q9H582 1327 aaPredicted RBP16.16■□□□□ 0.18
C15orf39-201ENST00000360639 TRHP20396 242 aaPredicted RBP16.16■□□□□ 0.18
C15orf39-201ENST00000360639 ACIN1Q9UKV3 1341 aaKnown RBP16.16■□□□□ 0.18
C15orf39-201ENST00000360639 KIAA0586Q9BVV6 1533 aa16.14■□□□□ 0.17
C15orf39-201ENST00000360639 ARID4BQ4LE39 1312 aaPredicted RBP16.13■□□□□ 0.17
C15orf39-201ENST00000360639 PKD2Q13563 968 aa16.12■□□□□ 0.17
C15orf39-201ENST00000360639 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
C15orf39-201ENST00000360639 MPHOSPH9Q99550 1183 aa16.12■□□□□ 0.17
C15orf39-201ENST00000360639 GTF3C3Q9Y5Q9 886 aa16.12■□□□□ 0.17
C15orf39-201ENST00000360639 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.17
C15orf39-201ENST00000360639 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
C15orf39-201ENST00000360639 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
C15orf39-201ENST00000360639 ANKRD30AQ9BXX3 1397 aa16.11■□□□□ 0.17
C15orf39-201ENST00000360639 GGT6Q6P531 493 aa16.1■□□□□ 0.17
C15orf39-201ENST00000360639 GRIN2AQ12879 1464 aa16.09■□□□□ 0.17
C15orf39-201ENST00000360639 FYCO1Q9BQS8 1478 aa16.09■□□□□ 0.17
C15orf39-201ENST00000360639 CUL7Q14999 1698 aa16.09■□□□□ 0.17
C15orf39-201ENST00000360639 NUP155O75694 1391 aa16.08■□□□□ 0.16
C15orf39-201ENST00000360639 FGD6Q6ZV73 1430 aa16.08■□□□□ 0.16
C15orf39-201ENST00000360639 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.16
C15orf39-201ENST00000360639 MLECQ14165 292 aa16.07■□□□□ 0.16
C15orf39-201ENST00000360639 MAGI1Q96QZ7 1491 aaPredicted RBP16.07■□□□□ 0.16
C15orf39-201ENST00000360639 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
C15orf39-201ENST00000360639 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
C15orf39-201ENST00000360639 NCOA2Q15596 1464 aa16.06■□□□□ 0.16
C15orf39-201ENST00000360639 SPAG9O60271 1321 aaKnown RBP16.06■□□□□ 0.16
C15orf39-201ENST00000360639 IQGAP2Q13576 1575 aa16.05■□□□□ 0.16
C15orf39-201ENST00000360639 MIER1Q8N108 512 aa16.04■□□□□ 0.16
C15orf39-201ENST00000360639 KIF3BO15066 747 aa16.04■□□□□ 0.16
C15orf39-201ENST00000360639 DCAF11Q8TEB1 546 aa16.03■□□□□ 0.16
C15orf39-201ENST00000360639 DHX57Q6P158 1386 aaKnown RBP16.02■□□□□ 0.16
C15orf39-201ENST00000360639 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
C15orf39-201ENST00000360639 TIMELESSQ9UNS1 1208 aa15.99■□□□□ 0.15
C15orf39-201ENST00000360639 KANK1Q14678 1352 aa15.98■□□□□ 0.15
C15orf39-201ENST00000360639 TIAM1Q13009 1591 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms