RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.54
CDC42SE2-201ENST00000360515 KDM6BO15054 1643 aa11.69□□□□□ -0.54
CDC42SE2-201ENST00000360515 MAP3K4Q9Y6R4 1608 aa11.67□□□□□ -0.54
CDC42SE2-201ENST00000360515 UHRF1BP1LA0JNW5 1464 aa11.65□□□□□ -0.54
CDC42SE2-201ENST00000360515 CUL7Q14999 1698 aa11.64□□□□□ -0.55
CDC42SE2-201ENST00000360515 CHMP7Q8WUX9 453 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE2-201ENST00000360515 WRNQ14191 1432 aaPredicted RBP eCLIP11.59□□□□□ -0.55
CDC42SE2-201ENST00000360515 KIAA0586Q9BVV6 1533 aa11.59□□□□□ -0.55
CDC42SE2-201ENST00000360515 KDM4FA0A1W2PPD8 638 aa11.55□□□□□ -0.56
CDC42SE2-201ENST00000360515 PRG4Q92954 1404 aaPredicted RBP11.55□□□□□ -0.56
CDC42SE2-201ENST00000360515 HECW2Q9P2P5 1572 aa11.53□□□□□ -0.56
CDC42SE2-201ENST00000360515 ABCC2Q92887 1545 aa11.52□□□□□ -0.57
CDC42SE2-201ENST00000360515 PLB1Q6P1J6 1458 aa11.51□□□□□ -0.57
CDC42SE2-201ENST00000360515 CFAP43Q8NDM7 1665 aa11.51□□□□□ -0.57
CDC42SE2-201ENST00000360515 KDM5BQ9UGL1 1544 aa11.49□□□□□ -0.57
CDC42SE2-201ENST00000360515 ADGRL1O94910 1474 aa11.49□□□□□ -0.57
CDC42SE2-201ENST00000360515 FBLN2P98095 1184 aa11.48□□□□□ -0.57
CDC42SE2-201ENST00000360515 ADAMTSL3P82987 1691 aa11.45□□□□□ -0.58
CDC42SE2-201ENST00000360515 TEX14Q8IWB6 1497 aa11.45□□□□□ -0.58
CDC42SE2-201ENST00000360515 MAGI3Q5TCQ9 1506 aa11.45□□□□□ -0.58
CDC42SE2-201ENST00000360515 TSPOAP1O95153 1857 aa11.44□□□□□ -0.58
CDC42SE2-201ENST00000360515 UGGT2Q9NYU1 1516 aa11.44□□□□□ -0.58
CDC42SE2-201ENST00000360515 ZCCHC11Q5TAX3 1644 aaKnown RBP11.43□□□□□ -0.58
CDC42SE2-201ENST00000360515 ILDR1Q86SU0 546 aaPredicted RBP11.43□□□□□ -0.58
CDC42SE2-201ENST00000360515 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
CDC42SE2-201ENST00000360515 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
CDC42SE2-201ENST00000360515 ARAP3Q8WWN8 1544 aa11.39□□□□□ -0.59
CDC42SE2-201ENST00000360515 IQGAP2Q13576 1575 aa11.38□□□□□ -0.59
CDC42SE2-201ENST00000360515 DISP1Q96F81 1524 aa11.37□□□□□ -0.59
CDC42SE2-201ENST00000360515 COL17A1Q9UMD9 1497 aaPredicted RBP11.37□□□□□ -0.59
CDC42SE2-201ENST00000360515 ASXL2Q76L83 1435 aa11.36□□□□□ -0.59
CDC42SE2-201ENST00000360515 TNIKQ9UKE5 1360 aa11.35□□□□□ -0.59
CDC42SE2-201ENST00000360515 KIAA0556O60303 1618 aa11.34□□□□□ -0.59
CDC42SE2-201ENST00000360515 FAM69CQ0P6D2 419 aa11.34□□□□□ -0.59
CDC42SE2-201ENST00000360515 ABCA8O94911 1581 aa11.33□□□□□ -0.59
CDC42SE2-201ENST00000360515 BCORL1Q5H9F3 1711 aa11.32□□□□□ -0.6
CDC42SE2-201ENST00000360515 CTTNBP2Q8WZ74 1663 aa11.32□□□□□ -0.6
CDC42SE2-201ENST00000360515 PHLDB1Q86UU1 1377 aa11.31□□□□□ -0.6
CDC42SE2-201ENST00000360515 UACAQ9BZF9 1416 aa11.31□□□□□ -0.6
CDC42SE2-201ENST00000360515 IGF1RP08069 1367 aa11.31□□□□□ -0.6
CDC42SE2-201ENST00000360515 ABCA9Q8IUA7 1624 aa11.31□□□□□ -0.6
CDC42SE2-201ENST00000360515 CARMIL2Q6F5E8 1435 aa11.29□□□□□ -0.6
CDC42SE2-201ENST00000360515 WDR7Q9Y4E6 1490 aa11.28□□□□□ -0.6
CDC42SE2-201ENST00000360515 PTPRGP23470 1445 aa11.27□□□□□ -0.61
CDC42SE2-201ENST00000360515 KIF21BO75037 1637 aa11.27□□□□□ -0.61
CDC42SE2-201ENST00000360515 FRMPD1Q5SYB0 1578 aa11.27□□□□□ -0.61
CDC42SE2-201ENST00000360515 FBXO41Q8TF61 875 aa11.26□□□□□ -0.61
CDC42SE2-201ENST00000360515 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDC42SE2-201ENST00000360515 KIF27Q86VH2 1401 aa11.25□□□□□ -0.61
CDC42SE2-201ENST00000360515 PCF11O94913 1555 aaKnown RBP11.24□□□□□ -0.61
CDC42SE2-201ENST00000360515 ZMYM4Q5VZL5 1548 aa11.24□□□□□ -0.61
CDC42SE2-201ENST00000360515 RICTORQ6R327 1708 aa11.21□□□□□ -0.61
CDC42SE2-201ENST00000360515 CFAP74Q9C0B2 1584 aa11.21□□□□□ -0.62
CDC42SE2-201ENST00000360515 ARHGEF40Q8TER5 1519 aa11.21□□□□□ -0.62
CDC42SE2-201ENST00000360515 NEO1Q92859 1461 aa11.2□□□□□ -0.62
CDC42SE2-201ENST00000360515 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
CDC42SE2-201ENST00000360515 LMTK3Q96Q04 1460 aa11.19□□□□□ -0.62
CDC42SE2-201ENST00000360515 TTC37Q6PGP7 1564 aa11.19□□□□□ -0.62
CDC42SE2-201ENST00000360515 PTPRMP28827 1452 aa11.18□□□□□ -0.62
CDC42SE2-201ENST00000360515 GOLGA3Q08378 1498 aa11.16□□□□□ -0.62
CDC42SE2-201ENST00000360515 SAMD9Q5K651 1589 aa11.16□□□□□ -0.62
CDC42SE2-201ENST00000360515 REREQ9P2R6 1566 aa11.14□□□□□ -0.63
CDC42SE2-201ENST00000360515 MADDQ8WXG6 1647 aa11.14□□□□□ -0.63
CDC42SE2-201ENST00000360515 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
CDC42SE2-201ENST00000360515 CARMIL1Q5VZK9 1371 aa11.13□□□□□ -0.63
CDC42SE2-201ENST00000360515 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
CDC42SE2-201ENST00000360515 MAGI2Q86UL8 1455 aa11.1□□□□□ -0.63
CDC42SE2-201ENST00000360515 SIGLEC1Q9BZZ2 1709 aa11.1□□□□□ -0.63
CDC42SE2-201ENST00000360515 CD109Q6YHK3 1445 aa11.1□□□□□ -0.63
CDC42SE2-201ENST00000360515 FHOD3Q2V2M9 1422 aa11.09□□□□□ -0.63
CDC42SE2-201ENST00000360515 ARHGEF12Q9NZN5 1544 aa11.08□□□□□ -0.64
CDC42SE2-201ENST00000360515 STRCQ7RTU9 1775 aa11.08□□□□□ -0.64
CDC42SE2-201ENST00000360515 RIMS1Q86UR5 1692 aaKnown RBP11.07□□□□□ -0.64
CDC42SE2-201ENST00000360515 FER1L4A9Z1Z3 1794 aa11.06□□□□□ -0.64
CDC42SE2-201ENST00000360515 EFCAB5A4FU69 1503 aa11.05□□□□□ -0.64
CDC42SE2-201ENST00000360515 RAPGEF6Q8TEU7 1601 aa11.03□□□□□ -0.64
CDC42SE2-201ENST00000360515 PRXQ9BXM0 1461 aa11.03□□□□□ -0.64
CDC42SE2-201ENST00000360515 MROH2AA6NES4 1674 aa11.02□□□□□ -0.65
CDC42SE2-201ENST00000360515 ATP10BO94823 1461 aa11.01□□□□□ -0.65
CDC42SE2-201ENST00000360515 SPATA31D1Q6ZQQ2 1576 aa10.99□□□□□ -0.65
CDC42SE2-201ENST00000360515 PTPRTO14522 1441 aa10.99□□□□□ -0.65
CDC42SE2-201ENST00000360515 FANCAO15360 1455 aa10.99□□□□□ -0.65
CDC42SE2-201ENST00000360515 LTBP4Q8N2S1 1624 aa10.99□□□□□ -0.65
CDC42SE2-201ENST00000360515 KDM5CP41229 1560 aa10.98□□□□□ -0.65
CDC42SE2-201ENST00000360515 ZNF142P52746 1687 aaPredicted RBP10.98□□□□□ -0.65
CDC42SE2-201ENST00000360515 ZFYVE16Q7Z3T8 1539 aa10.96□□□□□ -0.66
CDC42SE2-201ENST00000360515 AGLP35573 1532 aa10.96□□□□□ -0.66
CDC42SE2-201ENST00000360515 SOCS7O14512 581 aa10.92□□□□□ -0.66
CDC42SE2-201ENST00000360515 SETD1BQ9UPS6 1966 aaKnown RBP10.92□□□□□ -0.66
CDC42SE2-201ENST00000360515 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDC42SE2-201ENST00000360515 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
CDC42SE2-201ENST00000360515 HECW1Q76N89 1606 aa10.91□□□□□ -0.66
CDC42SE2-201ENST00000360515 AKNAQ7Z591 1439 aa10.91□□□□□ -0.66
CDC42SE2-201ENST00000360515 DENND4BO75064 1496 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE2-201ENST00000360515 C3P01024 1663 aa10.9□□□□□ -0.66
CDC42SE2-201ENST00000360515 NUP153P49790 1475 aaKnown RBP10.9□□□□□ -0.66
CDC42SE2-201ENST00000360515 MYO5CQ9NQX4 1742 aa10.89□□□□□ -0.67
CDC42SE2-201ENST00000360515 YEATS2Q9ULM3 1422 aa10.88□□□□□ -0.67
CDC42SE2-201ENST00000360515 CERKQ8TCT0 537 aa10.86□□□□□ -0.67
CDC42SE2-201ENST00000360515 C9orf84Q5VXU9 1444 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms