RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 RIMBP3CA6NJZ7 1639 aa31.59■■■□□ 2.65
HLA-DRB1-201ENST00000360004 RIMBP3BA6NNM3 1639 aa31.59■■■□□ 2.65
HLA-DRB1-201ENST00000360004 RIMBP3Q9UFD9 1639 aa31.59■■■□□ 2.65
HLA-DRB1-201ENST00000360004 JPH4Q96JJ6 628 aa31.55■■■□□ 2.64
HLA-DRB1-201ENST00000360004 EHMT2Q96KQ7 1210 aa31.5■■■□□ 2.63
HLA-DRB1-201ENST00000360004 IQGAP2Q13576 1575 aa31.48■■■□□ 2.63
HLA-DRB1-201ENST00000360004 SHROOM2Q13796 1616 aa31.48■■■□□ 2.63
HLA-DRB1-201ENST00000360004 PRG4Q92954 1404 aaPredicted RBP31.48■■■□□ 2.63
HLA-DRB1-201ENST00000360004 KIF21BO75037 1637 aa31.46■■■□□ 2.63
HLA-DRB1-201ENST00000360004 CTTNBP2Q8WZ74 1663 aa31.42■■■□□ 2.62
HLA-DRB1-201ENST00000360004 CYB5RLQ6IPT4 315 aa31.42■■■□□ 2.62
HLA-DRB1-201ENST00000360004 UBTFP17480 764 aaKnown RBP31.38■■■□□ 2.61
HLA-DRB1-201ENST00000360004 ARAP1Q96P48 1450 aa31.38■■■□□ 2.61
HLA-DRB1-201ENST00000360004 ERCC6L2Q5T890 1561 aa31.38■■■□□ 2.61
HLA-DRB1-201ENST00000360004 GOLGA3Q08378 1498 aa31.37■■■□□ 2.61
HLA-DRB1-201ENST00000360004 CARMIL2Q6F5E8 1435 aa31.35■■■□□ 2.61
HLA-DRB1-201ENST00000360004 TTBK1Q5TCY1 1321 aaPredicted RBP31.28■■■□□ 2.6
HLA-DRB1-201ENST00000360004 RANGAP1P46060 587 aaPredicted RBP31.27■■■□□ 2.6
HLA-DRB1-201ENST00000360004 UGGT2Q9NYU1 1516 aa31.27■■■□□ 2.6
HLA-DRB1-201ENST00000360004 TNIKQ9UKE5 1360 aa31.18■■■□□ 2.58
HLA-DRB1-201ENST00000360004 DISP1Q96F81 1524 aa31.17■■■□□ 2.58
HLA-DRB1-201ENST00000360004 KIAA0556O60303 1618 aa31.16■■■□□ 2.58
HLA-DRB1-201ENST00000360004 PTPRGP23470 1445 aa31.15■■■□□ 2.58
HLA-DRB1-201ENST00000360004 P3H3Q8IVL6 736 aa31.11■■■□□ 2.57
HLA-DRB1-201ENST00000360004 SAMD9Q5K651 1589 aa31■■■□□ 2.55
HLA-DRB1-201ENST00000360004 NPM1P06748 294 aaKnown RBP eCLIP30.99■■■□□ 2.55
HLA-DRB1-201ENST00000360004 EFCAB5A4FU69 1503 aa30.98■■■□□ 2.55
HLA-DRB1-201ENST00000360004 FHOD3Q2V2M9 1422 aa30.92■■■□□ 2.54
HLA-DRB1-201ENST00000360004 UACAQ9BZF9 1416 aa30.92■■■□□ 2.54
HLA-DRB1-201ENST00000360004 LOC105371045A0A1W2PR82 267 aa30.91■■■□□ 2.54
HLA-DRB1-201ENST00000360004 ADCY10Q96PN6 1610 aa30.88■■■□□ 2.53
HLA-DRB1-201ENST00000360004 ABCC2Q92887 1545 aa30.84■■■□□ 2.53
HLA-DRB1-201ENST00000360004 PLB1Q6P1J6 1458 aa30.83■■■□□ 2.53
HLA-DRB1-201ENST00000360004 ARHGAP35Q9NRY4 1499 aa30.82■■■□□ 2.53
HLA-DRB1-201ENST00000360004 CLIP1P30622 1438 aa30.82■■■□□ 2.52
HLA-DRB1-201ENST00000360004 UHRF1BP1LA0JNW5 1464 aa30.82■■■□□ 2.52
HLA-DRB1-201ENST00000360004 TRHP20396 242 aaPredicted RBP30.8■■■□□ 2.52
HLA-DRB1-201ENST00000360004 ABCA8O94911 1581 aa30.76■■■□□ 2.52
HLA-DRB1-201ENST00000360004 FMN1Q68DA7 1419 aa30.73■■■□□ 2.51
HLA-DRB1-201ENST00000360004 CEP162Q5TB80 1403 aa30.73■■■□□ 2.51
HLA-DRB1-201ENST00000360004 ARID3CA6NKF2 412 aa30.72■■■□□ 2.51
HLA-DRB1-201ENST00000360004 ATP1B4Q9UN42 357 aaPredicted RBP30.72■■■□□ 2.51
HLA-DRB1-201ENST00000360004 RAPGEF6Q8TEU7 1601 aa30.71■■■□□ 2.51
HLA-DRB1-201ENST00000360004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.69■■■□□ 2.5
HLA-DRB1-201ENST00000360004 HNRNPUL2Q1KMD3 747 aaKnown RBP30.69■■■□□ 2.5
HLA-DRB1-201ENST00000360004 KDM5BQ9UGL1 1544 aa30.67■■■□□ 2.5
HLA-DRB1-201ENST00000360004 MAPKBP1O60336 1514 aa30.64■■■□□ 2.5
HLA-DRB1-201ENST00000360004 ZCCHC11Q5TAX3 1644 aaKnown RBP30.64■■■□□ 2.5
HLA-DRB1-201ENST00000360004 ASXL2Q76L83 1435 aa30.59■■■□□ 2.49
HLA-DRB1-201ENST00000360004 NUP153P49790 1475 aaKnown RBP30.57■■■□□ 2.48
HLA-DRB1-201ENST00000360004 HECW1Q76N89 1606 aa30.55■■■□□ 2.48
HLA-DRB1-201ENST00000360004 ATP10BO94823 1461 aa30.54■■■□□ 2.48
HLA-DRB1-201ENST00000360004 FAM69CQ0P6D2 419 aa30.52■■■□□ 2.48
HLA-DRB1-201ENST00000360004 ABCC10Q5T3U5 1492 aa30.49■■■□□ 2.47
HLA-DRB1-201ENST00000360004 WDR7Q9Y4E6 1490 aa30.48■■■□□ 2.47
HLA-DRB1-201ENST00000360004 CASKIN1Q8WXD9 1431 aa30.47■■■□□ 2.47
HLA-DRB1-201ENST00000360004 PCF11O94913 1555 aaKnown RBP30.47■■■□□ 2.47
HLA-DRB1-201ENST00000360004 KCNH8Q96L42 1107 aa30.46■■■□□ 2.47
HLA-DRB1-201ENST00000360004 PLEKHD1A6NEE1 506 aa30.43■■■□□ 2.46
HLA-DRB1-201ENST00000360004 DIP2BQ9P265 1576 aa30.43■■■□□ 2.46
HLA-DRB1-201ENST00000360004 FYCO1Q9BQS8 1478 aa30.43■■■□□ 2.46
HLA-DRB1-201ENST00000360004 EPRSP07814 1512 aaKnown RBP30.42■■■□□ 2.46
HLA-DRB1-201ENST00000360004 CDK13Q14004 1512 aaKnown RBP30.42■■■□□ 2.46
HLA-DRB1-201ENST00000360004 CDK11AQ9UQ88 783 aaPredicted RBP30.41■■■□□ 2.46
HLA-DRB1-201ENST00000360004 KIF13AQ9H1H9 1805 aa30.37■■■□□ 2.45
HLA-DRB1-201ENST00000360004 CCDC18Q5T9S5 1454 aa30.37■■■□□ 2.45
HLA-DRB1-201ENST00000360004 VPS8Q8N3P4 1428 aa30.32■■■□□ 2.44
HLA-DRB1-201ENST00000360004 GLI2P10070 1586 aa30.3■■■□□ 2.44
HLA-DRB1-201ENST00000360004 LRRIQ1Q96JM4 1722 aa30.25■■■□□ 2.43
HLA-DRB1-201ENST00000360004 TSPOAP1O95153 1857 aa30.23■■■□□ 2.43
HLA-DRB1-201ENST00000360004 CD109Q6YHK3 1445 aa30.2■■■□□ 2.42
HLA-DRB1-201ENST00000360004 APLP2Q06481 763 aa30.19■■■□□ 2.42
HLA-DRB1-201ENST00000360004 TROQ12816 1431 aaPredicted RBP30.19■■■□□ 2.42
HLA-DRB1-201ENST00000360004 CFAP43Q8NDM7 1665 aa30.17■■■□□ 2.42
HLA-DRB1-201ENST00000360004 MAP3K4Q9Y6R4 1608 aa30.17■■■□□ 2.42
HLA-DRB1-201ENST00000360004 MTUS2Q5JR59 1369 aa30.15■■■□□ 2.42
HLA-DRB1-201ENST00000360004 KIF14Q15058 1648 aa30.14■■■□□ 2.41
HLA-DRB1-201ENST00000360004 TEX14Q8IWB6 1497 aa30.13■■■□□ 2.41
HLA-DRB1-201ENST00000360004 ABCA9Q8IUA7 1624 aa30.13■■■□□ 2.41
HLA-DRB1-201ENST00000360004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.07■■■□□ 2.4
HLA-DRB1-201ENST00000360004 MAGI3Q5TCQ9 1506 aa30.06■■■□□ 2.4
HLA-DRB1-201ENST00000360004 TIAM1Q13009 1591 aa30.05■■■□□ 2.4
HLA-DRB1-201ENST00000360004 TTC37Q6PGP7 1564 aa30.04■■■□□ 2.4
HLA-DRB1-201ENST00000360004 PPRC1Q5VV67 1664 aaKnown RBP30.03■■■□□ 2.4
HLA-DRB1-201ENST00000360004 EHBP1L1Q8N3D4 1523 aa30.02■■■□□ 2.4
HLA-DRB1-201ENST00000360004 MAP3K1Q13233 1512 aa29.96■■■□□ 2.39
HLA-DRB1-201ENST00000360004 KDM6BO15054 1643 aa29.96■■■□□ 2.39
HLA-DRB1-201ENST00000360004 MYO5CQ9NQX4 1742 aa29.94■■■□□ 2.38
HLA-DRB1-201ENST00000360004 PLCH2O75038 1416 aa29.93■■■□□ 2.38
HLA-DRB1-201ENST00000360004 LRRC9Q6ZRR7 1453 aa29.93■■■□□ 2.38
HLA-DRB1-201ENST00000360004 FANCAO15360 1455 aa29.92■■■□□ 2.38
HLA-DRB1-201ENST00000360004 CCNB3Q8WWL7 1395 aa29.91■■■□□ 2.38
HLA-DRB1-201ENST00000360004 ARHGAP5Q13017 1502 aa29.91■■■□□ 2.38
HLA-DRB1-201ENST00000360004 CFAP74Q9C0B2 1584 aa29.9■■■□□ 2.38
HLA-DRB1-201ENST00000360004 EFCAB2Q5VUJ9 269 aa29.9■■■□□ 2.38
HLA-DRB1-201ENST00000360004 NEO1Q92859 1461 aa29.9■■■□□ 2.38
HLA-DRB1-201ENST00000360004 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
HLA-DRB1-201ENST00000360004 SUPT6HQ7KZ85 1726 aaKnown RBP29.88■■■□□ 2.37
HLA-DRB1-201ENST00000360004 KANK4Q5T7N3 995 aaPredicted RBP29.87■■■□□ 2.37
HLA-DRB1-201ENST00000360004 AKNAQ7Z591 1439 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms