RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PPARGC1BQ86YN6 1023 aaKnown RBP21.85■■□□□ 1.09
CSNK1E-201ENST00000359867 RANGAP1P46060 587 aaPredicted RBP21.84■■□□□ 1.09
CSNK1E-201ENST00000359867 CHD1O14646 1710 aa21.82■■□□□ 1.08
CSNK1E-201ENST00000359867 PELP1Q8IZL8 1130 aaKnown RBP21.79■■□□□ 1.08
CSNK1E-201ENST00000359867 CTTNBP2Q8WZ74 1663 aa21.76■■□□□ 1.07
CSNK1E-201ENST00000359867 CEP170Q5SW79 1584 aa21.75■■□□□ 1.07
CSNK1E-201ENST00000359867 CEP162Q5TB80 1403 aa21.74■■□□□ 1.07
CSNK1E-201ENST00000359867 TRIM26Q12899 539 aaPredicted RBP21.73■■□□□ 1.07
CSNK1E-201ENST00000359867 NUP160Q12769 1436 aa21.7■■□□□ 1.06
CSNK1E-201ENST00000359867 IQGAP2Q13576 1575 aa21.66■■□□□ 1.06
CSNK1E-201ENST00000359867 CLIP1P30622 1438 aa21.66■■□□□ 1.06
CSNK1E-201ENST00000359867 KIAA0586Q9BVV6 1533 aa21.65■■□□□ 1.06
CSNK1E-201ENST00000359867 P3H3Q8IVL6 736 aa21.59■■□□□ 1.05
CSNK1E-201ENST00000359867 ARHGAP35Q9NRY4 1499 aa21.58■■□□□ 1.05
CSNK1E-201ENST00000359867 JPH4Q96JJ6 628 aa21.54■■□□□ 1.04
CSNK1E-201ENST00000359867 CLASP1Q7Z460 1538 aa21.53■■□□□ 1.04
CSNK1E-201ENST00000359867 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
CSNK1E-201ENST00000359867 UGGT2Q9NYU1 1516 aa21.52■■□□□ 1.04
CSNK1E-201ENST00000359867 ARAP1Q96P48 1450 aa21.52■■□□□ 1.04
CSNK1E-201ENST00000359867 SAMD9Q5K651 1589 aa21.5■■□□□ 1.03
CSNK1E-201ENST00000359867 FHOD3Q2V2M9 1422 aa21.5■■□□□ 1.03
CSNK1E-201ENST00000359867 EFCAB5A4FU69 1503 aa21.49■■□□□ 1.03
CSNK1E-201ENST00000359867 DISP1Q96F81 1524 aa21.48■■□□□ 1.03
CSNK1E-201ENST00000359867 TTBK1Q5TCY1 1321 aaPredicted RBP21.45■■□□□ 1.02
CSNK1E-201ENST00000359867 KIAA0556O60303 1618 aa21.45■■□□□ 1.02
CSNK1E-201ENST00000359867 PRG4Q92954 1404 aaPredicted RBP21.45■■□□□ 1.02
CSNK1E-201ENST00000359867 SHROOM2Q13796 1616 aa21.45■■□□□ 1.02
CSNK1E-201ENST00000359867 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
CSNK1E-201ENST00000359867 CARMIL2Q6F5E8 1435 aa21.39■■□□□ 1.02
CSNK1E-201ENST00000359867 VPS8Q8N3P4 1428 aa21.39■■□□□ 1.01
CSNK1E-201ENST00000359867 FMN1Q68DA7 1419 aa21.31■■□□□ 1
CSNK1E-201ENST00000359867 PCF11O94913 1555 aaKnown RBP21.3■■□□□ 1
CSNK1E-201ENST00000359867 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
CSNK1E-201ENST00000359867 PTPRGP23470 1445 aa21.26■□□□□ 0.99
CSNK1E-201ENST00000359867 PLB1Q6P1J6 1458 aa21.24■□□□□ 0.99
CSNK1E-201ENST00000359867 CASKIN1Q8WXD9 1431 aa21.23■□□□□ 0.99
CSNK1E-201ENST00000359867 ARID3CA6NKF2 412 aa21.22■□□□□ 0.99
CSNK1E-201ENST00000359867 FYCO1Q9BQS8 1478 aa21.21■□□□□ 0.99
CSNK1E-201ENST00000359867 ARHGEF11O15085 1522 aa21.21■□□□□ 0.99
CSNK1E-201ENST00000359867 RAPGEF6Q8TEU7 1601 aa21.19■□□□□ 0.98
CSNK1E-201ENST00000359867 APLP2Q06481 763 aa21.17■□□□□ 0.98
CSNK1E-201ENST00000359867 LRRIQ1Q96JM4 1722 aa21.17■□□□□ 0.98
CSNK1E-201ENST00000359867 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
CSNK1E-201ENST00000359867 ABCA8O94911 1581 aa21.15■□□□□ 0.98
CSNK1E-201ENST00000359867 NUP153P49790 1475 aaKnown RBP21.14■□□□□ 0.98
CSNK1E-201ENST00000359867 RIMBP3CA6NJZ7 1639 aa21.14■□□□□ 0.97
CSNK1E-201ENST00000359867 RIMBP3BA6NNM3 1639 aa21.14■□□□□ 0.97
CSNK1E-201ENST00000359867 RIMBP3Q9UFD9 1639 aa21.14■□□□□ 0.97
CSNK1E-201ENST00000359867 CDK13Q14004 1512 aaKnown RBP21.12■□□□□ 0.97
CSNK1E-201ENST00000359867 UACAQ9BZF9 1416 aa21.12■□□□□ 0.97
CSNK1E-201ENST00000359867 EPRSP07814 1512 aaKnown RBP21.1■□□□□ 0.97
CSNK1E-201ENST00000359867 TIAM1Q13009 1591 aa21.1■□□□□ 0.97
CSNK1E-201ENST00000359867 KANK4Q5T7N3 995 aaPredicted RBP21.09■□□□□ 0.97
CSNK1E-201ENST00000359867 CFAP43Q8NDM7 1665 aa21.07■□□□□ 0.96
CSNK1E-201ENST00000359867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.07■□□□□ 0.96
CSNK1E-201ENST00000359867 MYT1Q01538 1121 aa21.07■□□□□ 0.96
CSNK1E-201ENST00000359867 HNRNPUL2Q1KMD3 747 aaKnown RBP21.07■□□□□ 0.96
CSNK1E-201ENST00000359867 ABCC2Q92887 1545 aa21.06■□□□□ 0.96
CSNK1E-201ENST00000359867 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
CSNK1E-201ENST00000359867 CYB5RLQ6IPT4 315 aa21.05■□□□□ 0.96
CSNK1E-201ENST00000359867 CCDC18Q5T9S5 1454 aa21.04■□□□□ 0.96
CSNK1E-201ENST00000359867 ADCY10Q96PN6 1610 aa21.03■□□□□ 0.96
CSNK1E-201ENST00000359867 MAP3K1Q13233 1512 aa21.02■□□□□ 0.96
CSNK1E-201ENST00000359867 ATP10BO94823 1461 aa21.02■□□□□ 0.96
CSNK1E-201ENST00000359867 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
CSNK1E-201ENST00000359867 LRRC9Q6ZRR7 1453 aa21■□□□□ 0.95
CSNK1E-201ENST00000359867 MAGI3Q5TCQ9 1506 aa21■□□□□ 0.95
CSNK1E-201ENST00000359867 UHRF1BP1LA0JNW5 1464 aa21■□□□□ 0.95
CSNK1E-201ENST00000359867 MTUS2Q5JR59 1369 aa20.97■□□□□ 0.95
CSNK1E-201ENST00000359867 ZCCHC11Q5TAX3 1644 aaKnown RBP20.95■□□□□ 0.94
CSNK1E-201ENST00000359867 KDM5BQ9UGL1 1544 aa20.94■□□□□ 0.94
CSNK1E-201ENST00000359867 EHBP1L1Q8N3D4 1523 aa20.91■□□□□ 0.94
CSNK1E-201ENST00000359867 CDK11AQ9UQ88 783 aaPredicted RBP20.91■□□□□ 0.94
CSNK1E-201ENST00000359867 PLEKHD1A6NEE1 506 aa20.89■□□□□ 0.93
CSNK1E-201ENST00000359867 DNAJC5Q9H3Z4 198 aa20.88■□□□□ 0.93
CSNK1E-201ENST00000359867 TROQ12816 1431 aaPredicted RBP20.86■□□□□ 0.93
CSNK1E-201ENST00000359867 NPM1P06748 294 aaKnown RBP eCLIP20.85■□□□□ 0.93
CSNK1E-201ENST00000359867 KIF14Q15058 1648 aa20.84■□□□□ 0.93
CSNK1E-201ENST00000359867 NCOA2Q15596 1464 aa20.83■□□□□ 0.93
CSNK1E-201ENST00000359867 SUPT6HQ7KZ85 1726 aaKnown RBP20.83■□□□□ 0.93
CSNK1E-201ENST00000359867 PHLDB1Q86UU1 1377 aa20.83■□□□□ 0.92
CSNK1E-201ENST00000359867 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
CSNK1E-201ENST00000359867 ASXL2Q76L83 1435 aa20.8■□□□□ 0.92
CSNK1E-201ENST00000359867 RRBP1Q9P2E9 1410 aaKnown RBP20.79■□□□□ 0.92
CSNK1E-201ENST00000359867 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
CSNK1E-201ENST00000359867 WDR7Q9Y4E6 1490 aa20.77■□□□□ 0.92
CSNK1E-201ENST00000359867 TTC37Q6PGP7 1564 aa20.71■□□□□ 0.91
CSNK1E-201ENST00000359867 ABCC10Q5T3U5 1492 aa20.71■□□□□ 0.91
CSNK1E-201ENST00000359867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.71■□□□□ 0.918e-8■■□□□ 12.3
CSNK1E-201ENST00000359867 CCNB3Q8WWL7 1395 aa20.71■□□□□ 0.91
CSNK1E-201ENST00000359867 MYOM3Q5VTT5 1437 aa20.71■□□□□ 0.91
CSNK1E-201ENST00000359867 MAPKBP1O60336 1514 aa20.69■□□□□ 0.9
CSNK1E-201ENST00000359867 FGD6Q6ZV73 1430 aa20.67■□□□□ 0.9
CSNK1E-201ENST00000359867 GPATCH8Q9UKJ3 1502 aaKnown RBP20.67■□□□□ 0.9
CSNK1E-201ENST00000359867 CDC42BPAQ5VT25 1732 aa20.66■□□□□ 0.9
CSNK1E-201ENST00000359867 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.9
CSNK1E-201ENST00000359867 ITSN2Q9NZM3 1697 aa20.62■□□□□ 0.89
CSNK1E-201ENST00000359867 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
CSNK1E-201ENST00000359867 ZNF777Q9ULD5 760 aaPredicted RBP20.61■□□□□ 0.89
CSNK1E-201ENST00000359867 ZNF644Q9H582 1327 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms