RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CLASP1Q7Z460 1538 aa24.95■■□□□ 1.58
TPM1-206ENST00000358278 IQGAP2Q13576 1575 aa24.9■■□□□ 1.58
TPM1-206ENST00000358278 KIAA0586Q9BVV6 1533 aa24.89■■□□□ 1.58
TPM1-206ENST00000358278 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
TPM1-206ENST00000358278 SHROOM2Q13796 1616 aa24.82■■□□□ 1.56
TPM1-206ENST00000358278 LOC105371045A0A1W2PR82 267 aa24.75■■□□□ 1.55
TPM1-206ENST00000358278 JPH4Q96JJ6 628 aa24.73■■□□□ 1.55
TPM1-206ENST00000358278 UGGT2Q9NYU1 1516 aa24.72■■□□□ 1.55
TPM1-206ENST00000358278 TNIKQ9UKE5 1360 aa24.71■■□□□ 1.55
TPM1-206ENST00000358278 PRG4Q92954 1404 aaPredicted RBP24.68■■□□□ 1.54
TPM1-206ENST00000358278 RANGAP1P46060 587 aaPredicted RBP24.66■■□□□ 1.54
TPM1-206ENST00000358278 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
TPM1-206ENST00000358278 ERCC6L2Q5T890 1561 aa24.66■■□□□ 1.54
TPM1-206ENST00000358278 RIMBP3CA6NJZ7 1639 aa24.65■■□□□ 1.54
TPM1-206ENST00000358278 RIMBP3BA6NNM3 1639 aa24.65■■□□□ 1.54
TPM1-206ENST00000358278 RIMBP3Q9UFD9 1639 aa24.65■■□□□ 1.54
TPM1-206ENST00000358278 KIAA0556O60303 1618 aa24.64■■□□□ 1.54
TPM1-206ENST00000358278 CARMIL2Q6F5E8 1435 aa24.63■■□□□ 1.53
TPM1-206ENST00000358278 SAMD9Q5K651 1589 aa24.63■■□□□ 1.53
TPM1-206ENST00000358278 DISP1Q96F81 1524 aa24.62■■□□□ 1.53
TPM1-206ENST00000358278 EFCAB5A4FU69 1503 aa24.61■■□□□ 1.53
TPM1-206ENST00000358278 DNAJC5Q9H3Z4 198 aa24.6■■□□□ 1.53
TPM1-206ENST00000358278 CEP162Q5TB80 1403 aa24.55■■□□□ 1.52
TPM1-206ENST00000358278 CLIP1P30622 1438 aa24.53■■□□□ 1.52
TPM1-206ENST00000358278 ARHGAP35Q9NRY4 1499 aa24.52■■□□□ 1.52
TPM1-206ENST00000358278 P3H3Q8IVL6 736 aa24.5■■□□□ 1.51
TPM1-206ENST00000358278 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
TPM1-206ENST00000358278 FHOD3Q2V2M9 1422 aa24.48■■□□□ 1.51
TPM1-206ENST00000358278 TTBK1Q5TCY1 1321 aaPredicted RBP24.47■■□□□ 1.51
TPM1-206ENST00000358278 PTPRGP23470 1445 aa24.44■■□□□ 1.5
TPM1-206ENST00000358278 CYB5RLQ6IPT4 315 aa24.36■■□□□ 1.49
TPM1-206ENST00000358278 FMN1Q68DA7 1419 aa24.35■■□□□ 1.49
TPM1-206ENST00000358278 RAPGEF6Q8TEU7 1601 aa24.33■■□□□ 1.49
TPM1-206ENST00000358278 ABCA8O94911 1581 aa24.31■■□□□ 1.48
TPM1-206ENST00000358278 PLB1Q6P1J6 1458 aa24.31■■□□□ 1.48
TPM1-206ENST00000358278 ADCY10Q96PN6 1610 aa24.3■■□□□ 1.48
TPM1-206ENST00000358278 UACAQ9BZF9 1416 aa24.3■■□□□ 1.48
TPM1-206ENST00000358278 ABCC2Q92887 1545 aa24.29■■□□□ 1.48
TPM1-206ENST00000358278 PCF11O94913 1555 aaKnown RBP24.27■■□□□ 1.48
TPM1-206ENST00000358278 HECW1Q76N89 1606 aa24.24■■□□□ 1.47
TPM1-206ENST00000358278 UHRF1BP1LA0JNW5 1464 aa24.24■■□□□ 1.47
TPM1-206ENST00000358278 VPS8Q8N3P4 1428 aa24.21■■□□□ 1.47
TPM1-206ENST00000358278 FYCO1Q9BQS8 1478 aa24.2■■□□□ 1.46
TPM1-206ENST00000358278 CASKIN1Q8WXD9 1431 aa24.19■■□□□ 1.46
TPM1-206ENST00000358278 LRRIQ1Q96JM4 1722 aa24.19■■□□□ 1.46
TPM1-206ENST00000358278 ZCCHC11Q5TAX3 1644 aaKnown RBP24.18■■□□□ 1.46
TPM1-206ENST00000358278 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
TPM1-206ENST00000358278 NUP153P49790 1475 aaKnown RBP24.18■■□□□ 1.46
TPM1-206ENST00000358278 KDM5BQ9UGL1 1544 aa24.13■■□□□ 1.45
TPM1-206ENST00000358278 ARID3CA6NKF2 412 aa24.13■■□□□ 1.45
TPM1-206ENST00000358278 NPM1P06748 294 aaKnown RBP eCLIP24.12■■□□□ 1.45
TPM1-206ENST00000358278 EPRSP07814 1512 aaKnown RBP24.09■■□□□ 1.45
TPM1-206ENST00000358278 CDK13Q14004 1512 aaKnown RBP24.09■■□□□ 1.45
TPM1-206ENST00000358278 CCDC18Q5T9S5 1454 aa24.09■■□□□ 1.45
TPM1-206ENST00000358278 ATP10BO94823 1461 aa24.08■■□□□ 1.45
TPM1-206ENST00000358278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.06■■□□□ 1.44
TPM1-206ENST00000358278 HNRNPUL2Q1KMD3 747 aaKnown RBP24.06■■□□□ 1.44
TPM1-206ENST00000358278 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
TPM1-206ENST00000358278 CFAP43Q8NDM7 1665 aa24.05■■□□□ 1.44
TPM1-206ENST00000358278 MAPKBP1O60336 1514 aa24.03■■□□□ 1.44
TPM1-206ENST00000358278 TIAM1Q13009 1591 aa23.99■■□□□ 1.43
TPM1-206ENST00000358278 ASXL2Q76L83 1435 aa23.97■■□□□ 1.43
TPM1-206ENST00000358278 APLP2Q06481 763 aa23.96■■□□□ 1.43
TPM1-206ENST00000358278 WDR7Q9Y4E6 1490 aa23.95■■□□□ 1.42
TPM1-206ENST00000358278 CDK11AQ9UQ88 783 aaPredicted RBP23.94■■□□□ 1.42
TPM1-206ENST00000358278 MAP3K1Q13233 1512 aa23.93■■□□□ 1.42
TPM1-206ENST00000358278 PLEKHD1A6NEE1 506 aa23.9■■□□□ 1.42
TPM1-206ENST00000358278 MAGI3Q5TCQ9 1506 aa23.89■■□□□ 1.42
TPM1-206ENST00000358278 KIF13AQ9H1H9 1805 aa23.88■■□□□ 1.41
TPM1-206ENST00000358278 EHBP1L1Q8N3D4 1523 aa23.87■■□□□ 1.41
TPM1-206ENST00000358278 TROQ12816 1431 aaPredicted RBP23.87■■□□□ 1.41
TPM1-206ENST00000358278 MTUS2Q5JR59 1369 aa23.86■■□□□ 1.41
TPM1-206ENST00000358278 KIF14Q15058 1648 aa23.86■■□□□ 1.41
TPM1-206ENST00000358278 DIP2BQ9P265 1576 aa23.86■■□□□ 1.41
TPM1-206ENST00000358278 LRRC9Q6ZRR7 1453 aa23.84■■□□□ 1.41
TPM1-206ENST00000358278 KCNH8Q96L42 1107 aa23.83■■□□□ 1.41
TPM1-206ENST00000358278 ABCC10Q5T3U5 1492 aa23.82■■□□□ 1.4
TPM1-206ENST00000358278 SUPT6HQ7KZ85 1726 aaKnown RBP23.82■■□□□ 1.4
TPM1-206ENST00000358278 GLI2P10070 1586 aa23.78■■□□□ 1.4
TPM1-206ENST00000358278 ABCA9Q8IUA7 1624 aa23.78■■□□□ 1.4
TPM1-206ENST00000358278 TTC37Q6PGP7 1564 aa23.77■■□□□ 1.4
TPM1-206ENST00000358278 KANK4Q5T7N3 995 aaPredicted RBP23.77■■□□□ 1.4
TPM1-206ENST00000358278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.76■■□□□ 1.39
TPM1-206ENST00000358278 TSPOAP1O95153 1857 aa23.76■■□□□ 1.39
TPM1-206ENST00000358278 FAM69CQ0P6D2 419 aa23.75■■□□□ 1.39
TPM1-206ENST00000358278 MYO5CQ9NQX4 1742 aa23.75■■□□□ 1.39
TPM1-206ENST00000358278 MAP3K4Q9Y6R4 1608 aa23.74■■□□□ 1.39
TPM1-206ENST00000358278 TRHP20396 242 aaPredicted RBP23.73■■□□□ 1.39
TPM1-206ENST00000358278 CDC42BPAQ5VT25 1732 aa23.71■■□□□ 1.39
TPM1-206ENST00000358278 NCOA2Q15596 1464 aa23.7■■□□□ 1.38
TPM1-206ENST00000358278 ITSN2Q9NZM3 1697 aa23.69■■□□□ 1.38
TPM1-206ENST00000358278 PPARGC1BQ86YN6 1023 aaKnown RBP23.67■■□□□ 1.38
TPM1-206ENST00000358278 PREX2Q70Z35 1606 aa23.67■■□□□ 1.38
TPM1-206ENST00000358278 CD109Q6YHK3 1445 aa23.66■■□□□ 1.38
TPM1-206ENST00000358278 CDC42BPBQ9Y5S2 1711 aa23.65■■□□□ 1.38
TPM1-206ENST00000358278 PPRC1Q5VV67 1664 aaKnown RBP23.64■■□□□ 1.38
TPM1-206ENST00000358278 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
TPM1-206ENST00000358278 ARHGAP5Q13017 1502 aa23.59■■□□□ 1.37
TPM1-206ENST00000358278 CFAP74Q9C0B2 1584 aa23.59■■□□□ 1.37
TPM1-206ENST00000358278 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms