RNA–Protein interactions for RNA: ENST00000358173.7

EPHB4-201, Transcript of EPH receptor B4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB4, Length 4,329 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-201ENST00000358173 EIF4G1Q04637 1599 aaKnown RBP21.97■■□□□ 1.11
EPHB4-201ENST00000358173 TSPY4P0CV99 314 aa21.95■■□□□ 1.1
EPHB4-201ENST00000358173 TSPY10P0CW01 314 aa21.95■■□□□ 1.1
EPHB4-201ENST00000358173 PLEKHD1A6NEE1 506 aa21.94■■□□□ 1.1
EPHB4-201ENST00000358173 NCAPD3P42695 1498 aa21.93■■□□□ 1.1
EPHB4-201ENST00000358173 NPM1P06748 294 aaKnown RBP eCLIP21.92■■□□□ 1.1
EPHB4-201ENST00000358173 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
EPHB4-201ENST00000358173 CCNB3Q8WWL7 1395 aa21.88■■□□□ 1.09
EPHB4-201ENST00000358173 CFDP1Q9UEE9 299 aaPredicted RBP21.87■■□□□ 1.09
EPHB4-201ENST00000358173 FHAD1B1AJZ9 1412 aa21.87■■□□□ 1.09
EPHB4-201ENST00000358173 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
EPHB4-201ENST00000358173 BICRAQ9NZM4 1560 aa21.84■■□□□ 1.09
EPHB4-201ENST00000358173 FKBP8Q14318 412 aa21.84■■□□□ 1.09
EPHB4-201ENST00000358173 KDM2AQ9Y2K7 1162 aa21.82■■□□□ 1.08
EPHB4-201ENST00000358173 CHGAP10645 457 aaKnown RBP21.8■■□□□ 1.08
EPHB4-201ENST00000358173 FHOD3Q2V2M9 1422 aa21.78■■□□□ 1.08
EPHB4-201ENST00000358173 CLSPNQ9HAW4 1339 aa21.77■■□□□ 1.07
EPHB4-201ENST00000358173 RAD54L2Q9Y4B4 1467 aa21.76■■□□□ 1.07
EPHB4-201ENST00000358173 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
EPHB4-201ENST00000358173 IGF1RP08069 1367 aa21.74■■□□□ 1.07
EPHB4-201ENST00000358173 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
EPHB4-201ENST00000358173 NESP48681 1621 aa21.69■■□□□ 1.06
EPHB4-201ENST00000358173 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
EPHB4-201ENST00000358173 RGL3Q3MIN7 710 aa21.65■■□□□ 1.06
EPHB4-201ENST00000358173 CFTRP13569 1480 aa21.65■■□□□ 1.06
EPHB4-201ENST00000358173 HNRNPUQ00839 825 aaKnown RBP eCLIP21.64■■□□□ 1.06
EPHB4-201ENST00000358173 PLPPR3Q6T4P5 718 aa21.64■■□□□ 1.05
EPHB4-201ENST00000358173 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
EPHB4-201ENST00000358173 DAXXQ9UER7 740 aaPredicted RBP21.63■■□□□ 1.05
EPHB4-201ENST00000358173 FMN1Q68DA7 1419 aa21.61■■□□□ 1.05
EPHB4-201ENST00000358173 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
EPHB4-201ENST00000358173 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
EPHB4-201ENST00000358173 FAM9BQ8IZU0 186 aa21.59■■□□□ 1.05
EPHB4-201ENST00000358173 EIF4G2P78344 907 aaKnown RBP eCLIP21.56■■□□□ 1.04
EPHB4-201ENST00000358173 FOXD1Q16676 465 aa21.56■■□□□ 1.04
EPHB4-201ENST00000358173 RTL5Q5HYW3 569 aaPredicted RBP21.56■■□□□ 1.04
EPHB4-201ENST00000358173 JPH4Q96JJ6 628 aa21.55■■□□□ 1.04
EPHB4-201ENST00000358173 RAB3GAP2Q9H2M9 1393 aa21.55■■□□□ 1.04
EPHB4-201ENST00000358173 SETD5Q9C0A6 1442 aa21.53■■□□□ 1.04
EPHB4-201ENST00000358173 UNC13AQ9UPW8 1703 aa21.53■■□□□ 1.04
EPHB4-201ENST00000358173 ESF1Q9H501 851 aaKnown RBP21.52■■□□□ 1.04
EPHB4-201ENST00000358173 STAG3Q9UJ98 1225 aa21.52■■□□□ 1.04
EPHB4-201ENST00000358173 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.04
EPHB4-201ENST00000358173 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.036e-7■■■■■ 31.1
EPHB4-201ENST00000358173 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
EPHB4-201ENST00000358173 SALL2Q9Y467 1007 aaPredicted RBP21.49■■□□□ 1.03
EPHB4-201ENST00000358173 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
EPHB4-201ENST00000358173 CUX1P39880 1505 aa21.48■■□□□ 1.03
EPHB4-201ENST00000358173 IRX6P78412 446 aaPredicted RBP21.46■■□□□ 1.03
EPHB4-201ENST00000358173 SENP3-EIF4A1A0A087X0R7 540 aa21.43■■□□□ 1.02
EPHB4-201ENST00000358173 MRS2Q9HD23 443 aa21.43■■□□□ 1.02
EPHB4-201ENST00000358173 KIF21BO75037 1637 aa21.43■■□□□ 1.02
EPHB4-201ENST00000358173 SUPT16HQ9Y5B9 1047 aaKnown RBP21.42■■□□□ 1.02
EPHB4-201ENST00000358173 TOP2BQ02880 1626 aa21.38■■□□□ 1.01
EPHB4-201ENST00000358173 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
EPHB4-201ENST00000358173 TMC1Q8TDI8 760 aa21.38■■□□□ 1.01
EPHB4-201ENST00000358173 CARD11Q9BXL7 1154 aa21.35■■□□□ 1.01
EPHB4-201ENST00000358173 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
EPHB4-201ENST00000358173 HNRNPMP52272 730 aaKnown RBP eCLIP21.34■■□□□ 1.01
EPHB4-201ENST00000358173 PKD2Q13563 968 aa21.34■■□□□ 1.01
EPHB4-201ENST00000358173 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
EPHB4-201ENST00000358173 TOPBP1Q92547 1522 aa21.33■■□□□ 1.01
EPHB4-201ENST00000358173 MPHOSPH9Q99550 1183 aa21.33■■□□□ 1
EPHB4-201ENST00000358173 DCAF11Q8TEB1 546 aa21.31■■□□□ 1
EPHB4-201ENST00000358173 DHX57Q6P158 1386 aaKnown RBP21.29■■□□□ 1
EPHB4-201ENST00000358173 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
EPHB4-201ENST00000358173 PHLDB1Q86UU1 1377 aa21.26■□□□□ 0.99
EPHB4-201ENST00000358173 ANP32AP39687 249 aaKnown RBP21.26■□□□□ 0.99
EPHB4-201ENST00000358173 NPM2Q86SE8 214 aaKnown RBP21.25■□□□□ 0.99
EPHB4-201ENST00000358173 ERICH3Q5RHP9 1530 aa21.23■□□□□ 0.99
EPHB4-201ENST00000358173 ZNF644Q9H582 1327 aaPredicted RBP21.23■□□□□ 0.99
EPHB4-201ENST00000358173 NUP155O75694 1391 aa21.22■□□□□ 0.99
EPHB4-201ENST00000358173 CCDC18Q5T9S5 1454 aa21.22■□□□□ 0.99
EPHB4-201ENST00000358173 TIMELESSQ9UNS1 1208 aa21.22■□□□□ 0.99
EPHB4-201ENST00000358173 PPP1R15AO75807 674 aaPredicted RBP21.21■□□□□ 0.99
EPHB4-201ENST00000358173 PTPRGP23470 1445 aa21.2■□□□□ 0.98
EPHB4-201ENST00000358173 EFCAB2Q5VUJ9 269 aa21.2■□□□□ 0.98
EPHB4-201ENST00000358173 HSPA5P11021 654 aaKnown RBP21.19■□□□□ 0.98
EPHB4-201ENST00000358173 GGT6Q6P531 493 aa21.18■□□□□ 0.98
EPHB4-201ENST00000358173 L3MBTL2Q969R5 705 aa21.18■□□□□ 0.98
EPHB4-201ENST00000358173 CCDC136Q96JN2 1154 aa21.18■□□□□ 0.98
EPHB4-201ENST00000358173 ANP32EQ9BTT0 268 aa21.17■□□□□ 0.98
EPHB4-201ENST00000358173 BCL11AQ9H165 835 aa21.17■□□□□ 0.98
EPHB4-201ENST00000358173 CANXP27824 592 aaKnown RBP21.16■□□□□ 0.98
EPHB4-201ENST00000358173 ARID4BQ4LE39 1312 aaPredicted RBP21.16■□□□□ 0.98
EPHB4-201ENST00000358173 ANKRD30AQ9BXX3 1397 aa21.16■□□□□ 0.98
EPHB4-201ENST00000358173 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
EPHB4-201ENST00000358173 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
EPHB4-201ENST00000358173 SLC24A1O60721 1099 aa21.15■□□□□ 0.98
EPHB4-201ENST00000358173 MLECQ14165 292 aa21.13■□□□□ 0.97
EPHB4-201ENST00000358173 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
EPHB4-201ENST00000358173 NEFMP07197 916 aa21.11■□□□□ 0.97
EPHB4-201ENST00000358173 DNMBPQ6XZF7 1577 aa21.11■□□□□ 0.97
EPHB4-201ENST00000358173 NBR1Q14596 966 aa21.1■□□□□ 0.97
EPHB4-201ENST00000358173 FGD6Q6ZV73 1430 aa21.09■□□□□ 0.97
EPHB4-201ENST00000358173 WDR43Q15061 677 aaKnown RBP eCLIP21.08■□□□□ 0.97
EPHB4-201ENST00000358173 CASKIN1Q8WXD9 1431 aa21.08■□□□□ 0.97
EPHB4-201ENST00000358173 KIF3BO15066 747 aa21.07■□□□□ 0.96
EPHB4-201ENST00000358173 MYOM3Q5VTT5 1437 aa21.03■□□□□ 0.96
EPHB4-201ENST00000358173 CC2D1BQ5T0F9 858 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms