RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 RIMBP3Q9UFD9 1639 aa26.4■■□□□ 1.82
FDPS-201ENST00000356657 FAM9AQ8IZU1 332 aaPredicted RBP26.38■■□□□ 1.81
FDPS-201ENST00000356657 ARHGEF11O15085 1522 aa26.36■■□□□ 1.81
FDPS-201ENST00000356657 KIAA0586Q9BVV6 1533 aa26.36■■□□□ 1.81
FDPS-201ENST00000356657 CTTNBP2Q8WZ74 1663 aa26.33■■□□□ 1.8
FDPS-201ENST00000356657 SHROOM2Q13796 1616 aa26.29■■□□□ 1.8
FDPS-201ENST00000356657 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
FDPS-201ENST00000356657 IQGAP2Q13576 1575 aa26.28■■□□□ 1.8
FDPS-201ENST00000356657 JPH4Q96JJ6 628 aa26.16■■□□□ 1.78
FDPS-201ENST00000356657 UGGT2Q9NYU1 1516 aa26.15■■□□□ 1.78
FDPS-201ENST00000356657 ARAP1Q96P48 1450 aa26.12■■□□□ 1.77
FDPS-201ENST00000356657 CYB5RLQ6IPT4 315 aa26.11■■□□□ 1.77
FDPS-201ENST00000356657 PRG4Q92954 1404 aaPredicted RBP26.1■■□□□ 1.77
FDPS-201ENST00000356657 CARMIL2Q6F5E8 1435 aa26.09■■□□□ 1.77
FDPS-201ENST00000356657 UBTFP17480 764 aaKnown RBP26.07■■□□□ 1.76
FDPS-201ENST00000356657 KIAA0556O60303 1618 aa26.01■■□□□ 1.75
FDPS-201ENST00000356657 DISP1Q96F81 1524 aa26■■□□□ 1.75
FDPS-201ENST00000356657 ERCC6L2Q5T890 1561 aa26■■□□□ 1.75
FDPS-201ENST00000356657 EFCAB5A4FU69 1503 aa26■■□□□ 1.75
FDPS-201ENST00000356657 TNIKQ9UKE5 1360 aa25.99■■□□□ 1.75
FDPS-201ENST00000356657 SAMD9Q5K651 1589 aa25.98■■□□□ 1.75
FDPS-201ENST00000356657 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
FDPS-201ENST00000356657 PTPRGP23470 1445 aa25.86■■□□□ 1.73
FDPS-201ENST00000356657 ARHGAP35Q9NRY4 1499 aa25.79■■□□□ 1.72
FDPS-201ENST00000356657 CLIP1P30622 1438 aa25.78■■□□□ 1.72
FDPS-201ENST00000356657 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
FDPS-201ENST00000356657 CEP162Q5TB80 1403 aa25.75■■□□□ 1.71
FDPS-201ENST00000356657 UHRF1BP1LA0JNW5 1464 aa25.73■■□□□ 1.71
FDPS-201ENST00000356657 RANGAP1P46060 587 aaPredicted RBP25.73■■□□□ 1.71
FDPS-201ENST00000356657 FHOD3Q2V2M9 1422 aa25.72■■□□□ 1.71
FDPS-201ENST00000356657 FMN1Q68DA7 1419 aa25.72■■□□□ 1.71
FDPS-201ENST00000356657 UACAQ9BZF9 1416 aa25.72■■□□□ 1.71
FDPS-201ENST00000356657 ABCC2Q92887 1545 aa25.7■■□□□ 1.7
FDPS-201ENST00000356657 TRHP20396 242 aaPredicted RBP25.69■■□□□ 1.7
FDPS-201ENST00000356657 ABCA8O94911 1581 aa25.69■■□□□ 1.7
FDPS-201ENST00000356657 ADCY10Q96PN6 1610 aa25.68■■□□□ 1.7
FDPS-201ENST00000356657 P3H3Q8IVL6 736 aa25.68■■□□□ 1.7
FDPS-201ENST00000356657 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
FDPS-201ENST00000356657 RAPGEF6Q8TEU7 1601 aa25.64■■□□□ 1.7
FDPS-201ENST00000356657 PLB1Q6P1J6 1458 aa25.63■■□□□ 1.69
FDPS-201ENST00000356657 KDM5BQ9UGL1 1544 aa25.58■■□□□ 1.68
FDPS-201ENST00000356657 NPM1P06748 294 aaKnown RBP eCLIP25.56■■□□□ 1.683e-6■□□□□ 8.1
FDPS-201ENST00000356657 HECW1Q76N89 1606 aa25.56■■□□□ 1.68
FDPS-201ENST00000356657 MAPKBP1O60336 1514 aa25.53■■□□□ 1.68
FDPS-201ENST00000356657 CASKIN1Q8WXD9 1431 aa25.52■■□□□ 1.68
FDPS-201ENST00000356657 FYCO1Q9BQS8 1478 aa25.51■■□□□ 1.67
FDPS-201ENST00000356657 ZCCHC11Q5TAX3 1644 aaKnown RBP25.51■■□□□ 1.67
FDPS-201ENST00000356657 NUP153P49790 1475 aaKnown RBP25.5■■□□□ 1.67
FDPS-201ENST00000356657 PCF11O94913 1555 aaKnown RBP25.49■■□□□ 1.67
FDPS-201ENST00000356657 VPS8Q8N3P4 1428 aa25.45■■□□□ 1.67
FDPS-201ENST00000356657 CCDC18Q5T9S5 1454 aa25.43■■□□□ 1.66
FDPS-201ENST00000356657 ATP10BO94823 1461 aa25.43■■□□□ 1.66
FDPS-201ENST00000356657 EPRSP07814 1512 aaKnown RBP25.41■■□□□ 1.66
FDPS-201ENST00000356657 ASXL2Q76L83 1435 aa25.37■■□□□ 1.65
FDPS-201ENST00000356657 KIF13AQ9H1H9 1805 aa25.36■■□□□ 1.65
FDPS-201ENST00000356657 WDR7Q9Y4E6 1490 aa25.35■■□□□ 1.65
FDPS-201ENST00000356657 LRRIQ1Q96JM4 1722 aa25.35■■□□□ 1.65
FDPS-201ENST00000356657 CDK11AQ9UQ88 783 aaPredicted RBP25.32■■□□□ 1.64
FDPS-201ENST00000356657 CDK13Q14004 1512 aaKnown RBP25.32■■□□□ 1.64
FDPS-201ENST00000356657 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
FDPS-201ENST00000356657 ABCC10Q5T3U5 1492 aa25.3■■□□□ 1.64
FDPS-201ENST00000356657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.29■■□□□ 1.64
FDPS-201ENST00000356657 HNRNPUL2Q1KMD3 747 aaKnown RBP25.29■■□□□ 1.64
FDPS-201ENST00000356657 DIP2BQ9P265 1576 aa25.29■■□□□ 1.64
FDPS-201ENST00000356657 GLI2P10070 1586 aa25.27■■□□□ 1.64
FDPS-201ENST00000356657 MAP3K1Q13233 1512 aa25.27■■□□□ 1.64
FDPS-201ENST00000356657 CFAP43Q8NDM7 1665 aa25.26■■□□□ 1.63
FDPS-201ENST00000356657 PLEKHD1A6NEE1 506 aa25.26■■□□□ 1.63
FDPS-201ENST00000356657 FAM69CQ0P6D2 419 aa25.26■■□□□ 1.63
FDPS-201ENST00000356657 ARID3CA6NKF2 412 aa25.25■■□□□ 1.63
FDPS-201ENST00000356657 TROQ12816 1431 aaPredicted RBP25.21■■□□□ 1.63
FDPS-201ENST00000356657 TIAM1Q13009 1591 aa25.21■■□□□ 1.63
FDPS-201ENST00000356657 KIF14Q15058 1648 aa25.17■■□□□ 1.62
FDPS-201ENST00000356657 TSPOAP1O95153 1857 aa25.16■■□□□ 1.62
FDPS-201ENST00000356657 ABCA9Q8IUA7 1624 aa25.16■■□□□ 1.62
FDPS-201ENST00000356657 EHBP1L1Q8N3D4 1523 aa25.16■■□□□ 1.62
FDPS-201ENST00000356657 APLP2Q06481 763 aa25.15■■□□□ 1.62
FDPS-201ENST00000356657 MAP3K4Q9Y6R4 1608 aa25.14■■□□□ 1.62
FDPS-201ENST00000356657 MTUS2Q5JR59 1369 aa25.12■■□□□ 1.61
FDPS-201ENST00000356657 MAGI3Q5TCQ9 1506 aa25.11■■□□□ 1.61
FDPS-201ENST00000356657 KCNH8Q96L42 1107 aa25.09■■□□□ 1.61
FDPS-201ENST00000356657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.07■■□□□ 1.66e-8■■■■□ 20.3
FDPS-201ENST00000356657 LRRC9Q6ZRR7 1453 aa25.07■■□□□ 1.6
FDPS-201ENST00000356657 SUPT6HQ7KZ85 1726 aaKnown RBP25.05■■□□□ 1.6
FDPS-201ENST00000356657 TEX14Q8IWB6 1497 aa25.04■■□□□ 1.6
FDPS-201ENST00000356657 TTC37Q6PGP7 1564 aa25.04■■□□□ 1.6
FDPS-201ENST00000356657 CD109Q6YHK3 1445 aa25.04■■□□□ 1.6
FDPS-201ENST00000356657 ARAP3Q8WWN8 1544 aa25.03■■□□□ 1.6
FDPS-201ENST00000356657 MYO5CQ9NQX4 1742 aa25.02■■□□□ 1.6
FDPS-201ENST00000356657 PPRC1Q5VV67 1664 aaKnown RBP24.99■■□□□ 1.59
FDPS-201ENST00000356657 CFAP74Q9C0B2 1584 aa24.97■■□□□ 1.59
FDPS-201ENST00000356657 KDM6BO15054 1643 aa24.97■■□□□ 1.59
FDPS-201ENST00000356657 PREX2Q70Z35 1606 aa24.95■■□□□ 1.58
FDPS-201ENST00000356657 ITSN2Q9NZM3 1697 aa24.95■■□□□ 1.58
FDPS-201ENST00000356657 PHLDB1Q86UU1 1377 aa24.94■■□□□ 1.58
FDPS-201ENST00000356657 PLCH2O75038 1416 aa24.94■■□□□ 1.58
FDPS-201ENST00000356657 NCOA2Q15596 1464 aa24.93■■□□□ 1.58
FDPS-201ENST00000356657 CDC42BPAQ5VT25 1732 aa24.93■■□□□ 1.58
FDPS-201ENST00000356657 NEO1Q92859 1461 aa24.93■■□□□ 1.58
FDPS-201ENST00000356657 CCNB3Q8WWL7 1395 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms