RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 IGF1RP08069 1367 aa28.01■■■□□ 2.07
PDGFA-201ENST00000354513 JPH4Q96JJ6 628 aa28■■■□□ 2.07
PDGFA-201ENST00000354513 KIF27Q86VH2 1401 aa28■■■□□ 2.07
PDGFA-201ENST00000354513 ADCY10Q96PN6 1610 aa27.96■■■□□ 2.07
PDGFA-201ENST00000354513 KIAA0586Q9BVV6 1533 aa27.95■■■□□ 2.06
PDGFA-201ENST00000354513 MAPKBP1O60336 1514 aa27.85■■■□□ 2.05
PDGFA-201ENST00000354513 DIP2BQ9P265 1576 aa27.83■■■□□ 2.04
PDGFA-201ENST00000354513 CARMIL1Q5VZK9 1371 aa27.79■■■□□ 2.04
PDGFA-201ENST00000354513 ABCC10Q5T3U5 1492 aa27.77■■■□□ 2.04
PDGFA-201ENST00000354513 IQGAP2Q13576 1575 aa27.76■■■□□ 2.03
PDGFA-201ENST00000354513 TSPOAP1O95153 1857 aa27.65■■■□□ 2.02
PDGFA-201ENST00000354513 DISP1Q96F81 1524 aa27.64■■■□□ 2.01
PDGFA-201ENST00000354513 PTPRGP23470 1445 aa27.6■■■□□ 2.01
PDGFA-201ENST00000354513 CTTNBP2Q8WZ74 1663 aa27.6■■■□□ 2.01
PDGFA-201ENST00000354513 FAM69CQ0P6D2 419 aa27.6■■■□□ 2.01
PDGFA-201ENST00000354513 RAPGEF2Q9Y4G8 1499 aa27.59■■■□□ 2.01
PDGFA-201ENST00000354513 TNIKQ9UKE5 1360 aa27.59■■■□□ 2.01
PDGFA-201ENST00000354513 UGGT2Q9NYU1 1516 aa27.59■■■□□ 2.01
PDGFA-201ENST00000354513 NPM1P06748 294 aaKnown RBP eCLIP27.58■■■□□ 2.01
PDGFA-201ENST00000354513 CARMIL2Q6F5E8 1435 aa27.58■■■□□ 2.01
PDGFA-201ENST00000354513 ABCC2Q92887 1545 aa27.56■■■□□ 2
PDGFA-201ENST00000354513 KIAA0556O60303 1618 aa27.56■■■□□ 2
PDGFA-201ENST00000354513 PPRC1Q5VV67 1664 aaKnown RBP27.55■■■□□ 2
PDGFA-201ENST00000354513 UHRF1BP1LA0JNW5 1464 aa27.53■■■□□ 2
PDGFA-201ENST00000354513 KDM6BO15054 1643 aa27.52■■■□□ 2
PDGFA-201ENST00000354513 TTBK1Q5TCY1 1321 aaPredicted RBP27.47■■□□□ 1.99
PDGFA-201ENST00000354513 AEBP2Q6ZN18 517 aaPredicted RBP27.47■■□□□ 1.99
PDGFA-201ENST00000354513 ZCCHC11Q5TAX3 1644 aaKnown RBP27.47■■□□□ 1.99
PDGFA-201ENST00000354513 GLI2P10070 1586 aa27.47■■□□□ 1.99
PDGFA-201ENST00000354513 ASXL2Q76L83 1435 aa27.45■■□□□ 1.98
PDGFA-201ENST00000354513 UACAQ9BZF9 1416 aa27.45■■□□□ 1.98
PDGFA-201ENST00000354513 KDM5BQ9UGL1 1544 aa27.42■■□□□ 1.98
PDGFA-201ENST00000354513 PLB1Q6P1J6 1458 aa27.4■■□□□ 1.98
PDGFA-201ENST00000354513 MAP3K4Q9Y6R4 1608 aa27.38■■□□□ 1.97
PDGFA-201ENST00000354513 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
PDGFA-201ENST00000354513 EPRSP07814 1512 aaKnown RBP27.32■■□□□ 1.96
PDGFA-201ENST00000354513 ABCA8O94911 1581 aa27.3■■□□□ 1.96
PDGFA-201ENST00000354513 GOLGA3Q08378 1498 aa27.23■■□□□ 1.95
PDGFA-201ENST00000354513 COL17A1Q9UMD9 1497 aaPredicted RBP27.2■■□□□ 1.94
PDGFA-201ENST00000354513 WDR7Q9Y4E6 1490 aa27.2■■□□□ 1.94
PDGFA-201ENST00000354513 CFAP43Q8NDM7 1665 aa27.16■■□□□ 1.94
PDGFA-201ENST00000354513 SAMD9Q5K651 1589 aa27.15■■□□□ 1.94
PDGFA-201ENST00000354513 KDM4FA0A1W2PPD8 638 aa27.15■■□□□ 1.94
PDGFA-201ENST00000354513 TEX14Q8IWB6 1497 aa27.11■■□□□ 1.93
PDGFA-201ENST00000354513 MAGI3Q5TCQ9 1506 aa27.02■■□□□ 1.92
PDGFA-201ENST00000354513 ADGRL1O94910 1474 aa27■■□□□ 1.91
PDGFA-201ENST00000354513 RAPGEF6Q8TEU7 1601 aa27■■□□□ 1.91
PDGFA-201ENST00000354513 CSRNP3Q8WYN3 585 aa26.98■■□□□ 1.91
PDGFA-201ENST00000354513 ATP10BO94823 1461 aa26.97■■□□□ 1.91
PDGFA-201ENST00000354513 CD109Q6YHK3 1445 aa26.96■■□□□ 1.91
PDGFA-201ENST00000354513 ABCA9Q8IUA7 1624 aa26.95■■□□□ 1.9
PDGFA-201ENST00000354513 EEA1Q15075 1411 aa26.94■■□□□ 1.9
PDGFA-201ENST00000354513 P3H3Q8IVL6 736 aa26.93■■□□□ 1.9
PDGFA-201ENST00000354513 KIF21BO75037 1637 aa26.9■■□□□ 1.9
PDGFA-201ENST00000354513 KCNH8Q96L42 1107 aa26.89■■□□□ 1.89
PDGFA-201ENST00000354513 ARID3CA6NKF2 412 aa26.86■■□□□ 1.89
PDGFA-201ENST00000354513 NUP153P49790 1475 aaKnown RBP26.85■■□□□ 1.89
PDGFA-201ENST00000354513 FHOD3Q2V2M9 1422 aa26.82■■□□□ 1.88
PDGFA-201ENST00000354513 ARAP3Q8WWN8 1544 aa26.81■■□□□ 1.88
PDGFA-201ENST00000354513 EFCAB5A4FU69 1503 aa26.77■■□□□ 1.88
PDGFA-201ENST00000354513 FRMPD1Q5SYB0 1578 aa26.77■■□□□ 1.88
PDGFA-201ENST00000354513 FAM9AQ8IZU1 332 aaPredicted RBP26.72■■□□□ 1.87
PDGFA-201ENST00000354513 HECW2Q9P2P5 1572 aa26.68■■□□□ 1.86
PDGFA-201ENST00000354513 NEO1Q92859 1461 aa26.68■■□□□ 1.86
PDGFA-201ENST00000354513 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
PDGFA-201ENST00000354513 RICTORQ6R327 1708 aa26.66■■□□□ 1.86
PDGFA-201ENST00000354513 TTC37Q6PGP7 1564 aa26.66■■□□□ 1.86
PDGFA-201ENST00000354513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.64■■□□□ 1.852e-6■■■■■ 37.8
PDGFA-201ENST00000354513 PHLDB1Q86UU1 1377 aa26.63■■□□□ 1.85
PDGFA-201ENST00000354513 ADAMTSL3P82987 1691 aa26.63■■□□□ 1.85
PDGFA-201ENST00000354513 CDK13Q14004 1512 aaKnown RBP26.61■■□□□ 1.85
PDGFA-201ENST00000354513 CFAP74Q9C0B2 1584 aa26.59■■□□□ 1.85
PDGFA-201ENST00000354513 LRRIQ1Q96JM4 1722 aa26.58■■□□□ 1.85
PDGFA-201ENST00000354513 BCORL1Q5H9F3 1711 aa26.56■■□□□ 1.84
PDGFA-201ENST00000354513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.56■■□□□ 1.84
PDGFA-201ENST00000354513 HNRNPUL2Q1KMD3 747 aaKnown RBP26.56■■□□□ 1.84
PDGFA-201ENST00000354513 ARHGAP35Q9NRY4 1499 aa26.55■■□□□ 1.84
PDGFA-201ENST00000354513 ARHGEF40Q8TER5 1519 aa26.55■■□□□ 1.84
PDGFA-201ENST00000354513 RAPGEF3O95398 923 aa26.54■■□□□ 1.84
PDGFA-201ENST00000354513 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
PDGFA-201ENST00000354513 SIGLEC1Q9BZZ2 1709 aa26.52■■□□□ 1.84
PDGFA-201ENST00000354513 CHIC1Q5VXU3 224 aa26.52■■□□□ 1.84
PDGFA-201ENST00000354513 MADDQ8WXG6 1647 aa26.49■■□□□ 1.83
PDGFA-201ENST00000354513 FANCAO15360 1455 aa26.49■■□□□ 1.83
PDGFA-201ENST00000354513 ZMYM4Q5VZL5 1548 aa26.48■■□□□ 1.83
PDGFA-201ENST00000354513 AKNAQ7Z591 1439 aa26.47■■□□□ 1.83
PDGFA-201ENST00000354513 MYO5CQ9NQX4 1742 aa26.47■■□□□ 1.83
PDGFA-201ENST00000354513 PLEKHD1A6NEE1 506 aa26.46■■□□□ 1.83
PDGFA-201ENST00000354513 KIF14Q15058 1648 aa26.46■■□□□ 1.83
PDGFA-201ENST00000354513 DENND4BO75064 1496 aaPredicted RBP26.45■■□□□ 1.82
PDGFA-201ENST00000354513 EHMT2Q96KQ7 1210 aa26.44■■□□□ 1.82
PDGFA-201ENST00000354513 PTPRMP28827 1452 aa26.43■■□□□ 1.82
PDGFA-201ENST00000354513 FMN1Q68DA7 1419 aa26.41■■□□□ 1.82
PDGFA-201ENST00000354513 RIMS1Q86UR5 1692 aaKnown RBP26.41■■□□□ 1.82
PDGFA-201ENST00000354513 UBTFP17480 764 aaKnown RBP26.39■■□□□ 1.81
PDGFA-201ENST00000354513 ZFYVE16Q7Z3T8 1539 aa26.36■■□□□ 1.81
PDGFA-201ENST00000354513 PLCH2O75038 1416 aa26.35■■□□□ 1.81
PDGFA-201ENST00000354513 YEATS2Q9ULM3 1422 aa26.35■■□□□ 1.81
PDGFA-201ENST00000354513 PCF11O94913 1555 aaKnown RBP26.35■■□□□ 1.81
PDGFA-201ENST00000354513 POGZQ7Z3K3 1410 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms