RNA–Protein interactions for RNA: ENST00000352483.3

RIPK4-202, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

TSL 5 BASIC

Gene RIPK4, Length 4,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-202ENST00000352483 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
RIPK4-202ENST00000352483 IGF1RP08069 1367 aa18.61■□□□□ 0.57
RIPK4-202ENST00000352483 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
RIPK4-202ENST00000352483 FOXD1Q16676 465 aa18.58■□□□□ 0.57
RIPK4-202ENST00000352483 CUX1P39880 1505 aa18.58■□□□□ 0.57
RIPK4-202ENST00000352483 CCNB3Q8WWL7 1395 aa18.56■□□□□ 0.56
RIPK4-202ENST00000352483 CC2D2AQ9P2K1 1620 aa18.55■□□□□ 0.56
RIPK4-202ENST00000352483 NEFLP07196 543 aa18.53■□□□□ 0.56
RIPK4-202ENST00000352483 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
RIPK4-202ENST00000352483 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
RIPK4-202ENST00000352483 KIF21BO75037 1637 aa18.5■□□□□ 0.55
RIPK4-202ENST00000352483 CFTRP13569 1480 aa18.5■□□□□ 0.55
RIPK4-202ENST00000352483 KCNH8Q96L42 1107 aa18.5■□□□□ 0.55
RIPK4-202ENST00000352483 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
RIPK4-202ENST00000352483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.543e-6■■□□□ 11.4
RIPK4-202ENST00000352483 TONSLQ96HA7 1378 aa18.43■□□□□ 0.54
RIPK4-202ENST00000352483 RAB3GAP2Q9H2M9 1393 aa18.43■□□□□ 0.54
RIPK4-202ENST00000352483 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.544e-8■■■■□ 22.5
RIPK4-202ENST00000352483 KDM2AQ9Y2K7 1162 aa18.42■□□□□ 0.54
RIPK4-202ENST00000352483 TOP2BQ02880 1626 aa18.4■□□□□ 0.54
RIPK4-202ENST00000352483 ARHGAP35Q9NRY4 1499 aa18.37■□□□□ 0.53
RIPK4-202ENST00000352483 PDS5BQ9NTI5 1447 aa18.37■□□□□ 0.53
RIPK4-202ENST00000352483 PRXQ9BXM0 1461 aa18.35■□□□□ 0.53
RIPK4-202ENST00000352483 ANP32CO43423 234 aa18.34■□□□□ 0.53
RIPK4-202ENST00000352483 PHLDB1Q86UU1 1377 aa18.34■□□□□ 0.53
RIPK4-202ENST00000352483 CDK11AQ9UQ88 783 aaPredicted RBP18.34■□□□□ 0.53
RIPK4-202ENST00000352483 DHX57Q6P158 1386 aaKnown RBP18.34■□□□□ 0.53
RIPK4-202ENST00000352483 SLC4A1APQ9BWU0 796 aaKnown RBP18.33■□□□□ 0.52
RIPK4-202ENST00000352483 PEG3Q9GZU2 1588 aa18.32■□□□□ 0.52
RIPK4-202ENST00000352483 CFDP1Q9UEE9 299 aaPredicted RBP18.31■□□□□ 0.52
RIPK4-202ENST00000352483 ERICH6Q7L0X2 663 aa18.3■□□□□ 0.52
RIPK4-202ENST00000352483 ZNF644Q9H582 1327 aaPredicted RBP18.3■□□□□ 0.52
RIPK4-202ENST00000352483 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
RIPK4-202ENST00000352483 HMGXB3Q12766 1538 aa18.29■□□□□ 0.52
RIPK4-202ENST00000352483 RGL3Q3MIN7 710 aa18.29■□□□□ 0.52
RIPK4-202ENST00000352483 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
RIPK4-202ENST00000352483 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
RIPK4-202ENST00000352483 SALL2Q9Y467 1007 aaPredicted RBP18.27■□□□□ 0.51
RIPK4-202ENST00000352483 FAM9BQ8IZU0 186 aa18.26■□□□□ 0.51
RIPK4-202ENST00000352483 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
RIPK4-202ENST00000352483 TOPBP1Q92547 1522 aa18.24■□□□□ 0.51
RIPK4-202ENST00000352483 SETD5Q9C0A6 1442 aa18.24■□□□□ 0.51
RIPK4-202ENST00000352483 PLEKHD1A6NEE1 506 aa18.22■□□□□ 0.51
RIPK4-202ENST00000352483 FKBP8Q14318 412 aa18.21■□□□□ 0.51
RIPK4-202ENST00000352483 HNRNPUQ00839 825 aaKnown RBP eCLIP18.19■□□□□ 0.5
RIPK4-202ENST00000352483 TSPY4P0CV99 314 aa18.17■□□□□ 0.5
RIPK4-202ENST00000352483 TSPY10P0CW01 314 aa18.17■□□□□ 0.5
RIPK4-202ENST00000352483 JPH4Q96JJ6 628 aa18.16■□□□□ 0.5
RIPK4-202ENST00000352483 CHGAP10645 457 aaKnown RBP18.13■□□□□ 0.49
RIPK4-202ENST00000352483 HNRNPMP52272 730 aaKnown RBP eCLIP18.12■□□□□ 0.49
RIPK4-202ENST00000352483 FMN1Q68DA7 1419 aa18.11■□□□□ 0.49
RIPK4-202ENST00000352483 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
RIPK4-202ENST00000352483 LRRC9Q6ZRR7 1453 aa18.1■□□□□ 0.49
RIPK4-202ENST00000352483 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
RIPK4-202ENST00000352483 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
RIPK4-202ENST00000352483 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
RIPK4-202ENST00000352483 PPP1R15AO75807 674 aaPredicted RBP18.06■□□□□ 0.48
RIPK4-202ENST00000352483 L3MBTL2Q969R5 705 aa18.05■□□□□ 0.48
RIPK4-202ENST00000352483 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.48
RIPK4-202ENST00000352483 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
RIPK4-202ENST00000352483 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
RIPK4-202ENST00000352483 PKD2Q13563 968 aa18.03■□□□□ 0.48
RIPK4-202ENST00000352483 BIVM-ERCC5R4GMW8 1640 aa18.03■□□□□ 0.48
RIPK4-202ENST00000352483 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
RIPK4-202ENST00000352483 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
RIPK4-202ENST00000352483 DCAF11Q8TEB1 546 aa17.98■□□□□ 0.47
RIPK4-202ENST00000352483 DNMBPQ6XZF7 1577 aa17.97■□□□□ 0.47
RIPK4-202ENST00000352483 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
RIPK4-202ENST00000352483 RRBP1Q9P2E9 1410 aaKnown RBP17.96■□□□□ 0.46
RIPK4-202ENST00000352483 PCF11O94913 1555 aaKnown RBP17.95■□□□□ 0.46
RIPK4-202ENST00000352483 CDK13Q14004 1512 aaKnown RBP17.94■□□□□ 0.46
RIPK4-202ENST00000352483 PRDM2Q13029 1718 aa17.94■□□□□ 0.46
RIPK4-202ENST00000352483 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
RIPK4-202ENST00000352483 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
RIPK4-202ENST00000352483 TIAM1Q13009 1591 aa17.92■□□□□ 0.46
RIPK4-202ENST00000352483 CCDC18Q5T9S5 1454 aa17.92■□□□□ 0.46
RIPK4-202ENST00000352483 CARD11Q9BXL7 1154 aa17.91■□□□□ 0.46
RIPK4-202ENST00000352483 CASKIN1Q8WXD9 1431 aa17.9■□□□□ 0.46
RIPK4-202ENST00000352483 SUPT16HQ9Y5B9 1047 aaKnown RBP17.9■□□□□ 0.46
RIPK4-202ENST00000352483 PRG4Q92954 1404 aaPredicted RBP17.88■□□□□ 0.45
RIPK4-202ENST00000352483 NUP155O75694 1391 aa17.88■□□□□ 0.45
RIPK4-202ENST00000352483 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
RIPK4-202ENST00000352483 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
RIPK4-202ENST00000352483 MYOM3Q5VTT5 1437 aa17.84■□□□□ 0.45
RIPK4-202ENST00000352483 TMC1Q8TDI8 760 aa17.83■□□□□ 0.45
RIPK4-202ENST00000352483 GRIN2BQ13224 1484 aa17.83■□□□□ 0.44
RIPK4-202ENST00000352483 PTPRKQ15262 1439 aa17.82■□□□□ 0.44
RIPK4-202ENST00000352483 CARMIL2Q6F5E8 1435 aa17.82■□□□□ 0.44
RIPK4-202ENST00000352483 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
RIPK4-202ENST00000352483 NUTM2DQ5VT03 806 aaPredicted RBP17.81■□□□□ 0.44
RIPK4-202ENST00000352483 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
RIPK4-202ENST00000352483 CC2D1BQ5T0F9 858 aaKnown RBP17.79■□□□□ 0.44
RIPK4-202ENST00000352483 PLB1Q6P1J6 1458 aa17.79■□□□□ 0.44
RIPK4-202ENST00000352483 BCL11AQ9H165 835 aa17.79■□□□□ 0.44
RIPK4-202ENST00000352483 FYCO1Q9BQS8 1478 aa17.78■□□□□ 0.44
RIPK4-202ENST00000352483 PTPRGP23470 1445 aa17.78■□□□□ 0.44
RIPK4-202ENST00000352483 LAMC3Q9Y6N6 1575 aa17.77■□□□□ 0.44
RIPK4-202ENST00000352483 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.43
RIPK4-202ENST00000352483 GGT6Q6P531 493 aa17.76■□□□□ 0.43
RIPK4-202ENST00000352483 MYT1Q01538 1121 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms