RNA–Protein interactions for RNA: ENST00000352483.3

RIPK4-202, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

TSL 5 BASIC

Gene RIPK4, Length 4,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-202ENST00000352483 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
RIPK4-202ENST00000352483 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
RIPK4-202ENST00000352483 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
RIPK4-202ENST00000352483 SUPT5HO00267 1087 aaKnown RBP23.16■■□□□ 1.3
RIPK4-202ENST00000352483 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
RIPK4-202ENST00000352483 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
RIPK4-202ENST00000352483 ABCC9O60706 1549 aa21.51■■□□□ 1.03
RIPK4-202ENST00000352483 LOC105371045A0A1W2PR82 267 aa21.38■■□□□ 1.01
RIPK4-202ENST00000352483 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
RIPK4-202ENST00000352483 PCGF6Q9BYE7 350 aa21.32■■□□□ 1
RIPK4-202ENST00000352483 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
RIPK4-202ENST00000352483 ZCCHC6Q5VYS8 1495 aaKnown RBP21.25■□□□□ 0.99
RIPK4-202ENST00000352483 PPARGC1BQ86YN6 1023 aaKnown RBP21.16■□□□□ 0.98
RIPK4-202ENST00000352483 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
RIPK4-202ENST00000352483 PABPN1Q86U42 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
RIPK4-202ENST00000352483 RANGAP1P46060 587 aaPredicted RBP21.03■□□□□ 0.96
RIPK4-202ENST00000352483 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.95
RIPK4-202ENST00000352483 SCRIBQ14160 1630 aa20.92■□□□□ 0.94
RIPK4-202ENST00000352483 MYO15BQ96JP2 1530 aa20.74■□□□□ 0.91
RIPK4-202ENST00000352483 UBTFP17480 764 aaKnown RBP20.56■□□□□ 0.88
RIPK4-202ENST00000352483 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
RIPK4-202ENST00000352483 RSF1Q96T23 1441 aaPredicted RBP20.38■□□□□ 0.85
RIPK4-202ENST00000352483 HRCP23327 699 aa20.36■□□□□ 0.85
RIPK4-202ENST00000352483 TRIM26Q12899 539 aaPredicted RBP20.26■□□□□ 0.83
RIPK4-202ENST00000352483 ATP1B4Q9UN42 357 aaPredicted RBP20.2■□□□□ 0.82
RIPK4-202ENST00000352483 CCER1Q8TC90 406 aaPredicted RBP20.18■□□□□ 0.82
RIPK4-202ENST00000352483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.16■□□□□ 0.82
RIPK4-202ENST00000352483 APLP2Q06481 763 aa20.15■□□□□ 0.82
RIPK4-202ENST00000352483 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.8
RIPK4-202ENST00000352483 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
RIPK4-202ENST00000352483 MROH2BQ7Z745 1585 aa20.05■□□□□ 0.8
RIPK4-202ENST00000352483 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
RIPK4-202ENST00000352483 ITGAEP38570 1179 aa20■□□□□ 0.79
RIPK4-202ENST00000352483 NACADO15069 1562 aa19.94■□□□□ 0.78
RIPK4-202ENST00000352483 WIZO95785 1651 aa19.88■□□□□ 0.77
RIPK4-202ENST00000352483 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
RIPK4-202ENST00000352483 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.76
RIPK4-202ENST00000352483 P3H3Q8IVL6 736 aa19.76■□□□□ 0.75
RIPK4-202ENST00000352483 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
RIPK4-202ENST00000352483 ZEB1P37275 1124 aaPredicted RBP19.67■□□□□ 0.74
RIPK4-202ENST00000352483 SOGA1O94964 1423 aa19.67■□□□□ 0.74
RIPK4-202ENST00000352483 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
RIPK4-202ENST00000352483 ARID3CA6NKF2 412 aa19.61■□□□□ 0.73
RIPK4-202ENST00000352483 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
RIPK4-202ENST00000352483 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
RIPK4-202ENST00000352483 BAZ1BQ9UIG0 1483 aaKnown RBP19.47■□□□□ 0.71
RIPK4-202ENST00000352483 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
RIPK4-202ENST00000352483 FAM50AQ14320 339 aaKnown RBP19.41■□□□□ 0.7
RIPK4-202ENST00000352483 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
RIPK4-202ENST00000352483 SMARCA4P51532 1647 aa19.34■□□□□ 0.69
RIPK4-202ENST00000352483 CENPBP07199 599 aaPredicted RBP19.33■□□□□ 0.69
RIPK4-202ENST00000352483 FBLN2P98095 1184 aa19.33■□□□□ 0.68
RIPK4-202ENST00000352483 DIEXFQ68CQ4 756 aaKnown RBP19.29■□□□□ 0.68
RIPK4-202ENST00000352483 NEUROD1Q13562 356 aa19.27■□□□□ 0.68
RIPK4-202ENST00000352483 CNGB1Q14028 1251 aaPredicted RBP19.27■□□□□ 0.68
RIPK4-202ENST00000352483 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
RIPK4-202ENST00000352483 CLIP1P30622 1438 aa19.24■□□□□ 0.67
RIPK4-202ENST00000352483 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
RIPK4-202ENST00000352483 SMARCA2P51531 1590 aa19.18■□□□□ 0.66
RIPK4-202ENST00000352483 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
RIPK4-202ENST00000352483 TNIKQ9UKE5 1360 aa19.11■□□□□ 0.65
RIPK4-202ENST00000352483 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
RIPK4-202ENST00000352483 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
RIPK4-202ENST00000352483 GTF3C3Q9Y5Q9 886 aa19.07■□□□□ 0.64
RIPK4-202ENST00000352483 HIRIP3Q9BW71 556 aaPredicted RBP19.06■□□□□ 0.64
RIPK4-202ENST00000352483 BICRAQ9NZM4 1560 aa19.05■□□□□ 0.64
RIPK4-202ENST00000352483 RAPGEF2Q9Y4G8 1499 aa19.04■□□□□ 0.64
RIPK4-202ENST00000352483 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
RIPK4-202ENST00000352483 POLR3GLQ9BT43 218 aa19■□□□□ 0.63
RIPK4-202ENST00000352483 CHIC2Q9UKJ5 165 aa19■□□□□ 0.63
RIPK4-202ENST00000352483 CUX2O14529 1486 aa18.96■□□□□ 0.63
RIPK4-202ENST00000352483 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
RIPK4-202ENST00000352483 ZNF316A6NFI3 1004 aaPredicted RBP18.96■□□□□ 0.63
RIPK4-202ENST00000352483 TRIM52Q96A61 297 aa18.96■□□□□ 0.63
RIPK4-202ENST00000352483 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
RIPK4-202ENST00000352483 TDRD9Q8NDG6 1382 aaKnown RBP18.92■□□□□ 0.62
RIPK4-202ENST00000352483 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
RIPK4-202ENST00000352483 EEA1Q15075 1411 aa18.91■□□□□ 0.62
RIPK4-202ENST00000352483 ZNF777Q9ULD5 760 aaPredicted RBP18.9■□□□□ 0.62
RIPK4-202ENST00000352483 SYNJ1O43426 1573 aa18.89■□□□□ 0.61
RIPK4-202ENST00000352483 MIER1Q8N108 512 aa18.84■□□□□ 0.61
RIPK4-202ENST00000352483 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
RIPK4-202ENST00000352483 EIF4G1Q04637 1599 aaKnown RBP18.83■□□□□ 0.61
RIPK4-202ENST00000352483 ZNF326Q5BKZ1 582 aaKnown RBP18.82■□□□□ 0.6
RIPK4-202ENST00000352483 CARMIL1Q5VZK9 1371 aa18.82■□□□□ 0.6
RIPK4-202ENST00000352483 SIN3AQ96ST3 1273 aa18.81■□□□□ 0.6
RIPK4-202ENST00000352483 NESP48681 1621 aa18.79■□□□□ 0.6
RIPK4-202ENST00000352483 RRP7BPQ9NSQ0 103 aa18.78■□□□□ 0.6
RIPK4-202ENST00000352483 CADPSQ9ULU8 1353 aa18.78■□□□□ 0.6
RIPK4-202ENST00000352483 MYT1LQ9UL68 1186 aa18.77■□□□□ 0.6
RIPK4-202ENST00000352483 BCANQ96GW7 911 aa18.76■□□□□ 0.59
RIPK4-202ENST00000352483 PELP1Q8IZL8 1130 aaKnown RBP18.75■□□□□ 0.59
RIPK4-202ENST00000352483 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
RIPK4-202ENST00000352483 RAD54L2Q9Y4B4 1467 aa18.73■□□□□ 0.59
RIPK4-202ENST00000352483 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
RIPK4-202ENST00000352483 MTUS2Q5JR59 1369 aa18.68■□□□□ 0.58
RIPK4-202ENST00000352483 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
RIPK4-202ENST00000352483 CHMP7Q8WUX9 453 aaPredicted RBP18.67■□□□□ 0.58
RIPK4-202ENST00000352483 FHOD3Q2V2M9 1422 aa18.65■□□□□ 0.58
RIPK4-202ENST00000352483 NCAPD3P42695 1498 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms