RNA–Protein interactions for RNA: ENST00000347458.9

STAU1-202, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-202ENST00000347458 CUX2O14529 1486 aa15.31■□□□□ 0.04
STAU1-202ENST00000347458 MAPKBP1O60336 1514 aa15.31■□□□□ 0.04
STAU1-202ENST00000347458 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
STAU1-202ENST00000347458 RAPGEF2Q9Y4G8 1499 aa15.29■□□□□ 0.04
STAU1-202ENST00000347458 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.28■□□□□ 0.04
STAU1-202ENST00000347458 RRBP1Q9P2E9 1410 aaKnown RBP15.28■□□□□ 0.04
STAU1-202ENST00000347458 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
STAU1-202ENST00000347458 PPP4R2Q9NY27 417 aa15.26■□□□□ 0.03
STAU1-202ENST00000347458 BICRAQ9NZM4 1560 aa15.26■□□□□ 0.03
STAU1-202ENST00000347458 BAZ1BQ9UIG0 1483 aaKnown RBP15.26■□□□□ 0.03
STAU1-202ENST00000347458 HNRNPUQ00839 825 aaKnown RBP eCLIP15.26■□□□□ 0.03
STAU1-202ENST00000347458 UBE2Q2Q8WVN8 375 aa15.26■□□□□ 0.03
STAU1-202ENST00000347458 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
STAU1-202ENST00000347458 RAB3GAP2Q9H2M9 1393 aa15.24■□□□□ 0.03
STAU1-202ENST00000347458 B4GALNT3Q6L9W6 998 aa15.23■□□□□ 0.03
STAU1-202ENST00000347458 CCNB3Q8WWL7 1395 aa15.21■□□□□ 0.03
STAU1-202ENST00000347458 RTL5Q5HYW3 569 aaPredicted RBP15.19■□□□□ 0.02
STAU1-202ENST00000347458 ARAP1Q96P48 1450 aa15.17■□□□□ 0.02
STAU1-202ENST00000347458 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
STAU1-202ENST00000347458 IPO9Q96P70 1041 aaKnown RBP15.13■□□□□ 0.01
STAU1-202ENST00000347458 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
STAU1-202ENST00000347458 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
STAU1-202ENST00000347458 SETD5Q9C0A6 1442 aa15.09■□□□□ 0.01
STAU1-202ENST00000347458 WASHC2AQ641Q2 1341 aa15.08■□□□□ 0
STAU1-202ENST00000347458 ATAD2BQ9ULI0 1458 aa15.07■□□□□ 0
STAU1-202ENST00000347458 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
STAU1-202ENST00000347458 CCDC184Q52MB2 194 aa15.03■□□□□ -0
STAU1-202ENST00000347458 C11orf95C9JLR9 678 aaPredicted RBP14.99□□□□□ -0.01
STAU1-202ENST00000347458 EIF5BO60841 1220 aaKnown RBP14.99□□□□□ -0.01
STAU1-202ENST00000347458 WASHC2CQ9Y4E1 1318 aa14.98□□□□□ -0.01
STAU1-202ENST00000347458 NEFMP07197 916 aa14.98□□□□□ -0.01
STAU1-202ENST00000347458 BRPF3Q9ULD4 1205 aa14.97□□□□□ -0.01
STAU1-202ENST00000347458 LAS1LQ9Y4W2 734 aaKnown RBP14.97□□□□□ -0.01
STAU1-202ENST00000347458 FAM9BQ8IZU0 186 aa14.95□□□□□ -0.02
STAU1-202ENST00000347458 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
STAU1-202ENST00000347458 PRXQ9BXM0 1461 aa14.94□□□□□ -0.02
STAU1-202ENST00000347458 ZBED9Q6R2W3 1325 aa14.93□□□□□ -0.02
STAU1-202ENST00000347458 FAM50AQ14320 339 aaKnown RBP14.93□□□□□ -0.02
STAU1-202ENST00000347458 TONSLQ96HA7 1378 aa14.93□□□□□ -0.02
STAU1-202ENST00000347458 USP35Q9P2H5 1018 aa14.92□□□□□ -0.02
STAU1-202ENST00000347458 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
STAU1-202ENST00000347458 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
STAU1-202ENST00000347458 AKNAQ7Z591 1439 aa14.9□□□□□ -0.02
STAU1-202ENST00000347458 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
STAU1-202ENST00000347458 PHLDB1Q86UU1 1377 aa14.89□□□□□ -0.03
STAU1-202ENST00000347458 ARHGAP35Q9NRY4 1499 aa14.89□□□□□ -0.03
STAU1-202ENST00000347458 MRS2Q9HD23 443 aa14.86□□□□□ -0.03
STAU1-202ENST00000347458 PEG3Q9GZU2 1588 aa14.86□□□□□ -0.03
STAU1-202ENST00000347458 FHAD1B1AJZ9 1412 aa14.85□□□□□ -0.03
STAU1-202ENST00000347458 PKNOX2Q96KN3 472 aa14.85□□□□□ -0.03
STAU1-202ENST00000347458 PRKRIP1Q9H875 184 aaPredicted RBP14.84□□□□□ -0.03
STAU1-202ENST00000347458 TIAM1Q13009 1591 aa14.84□□□□□ -0.03
STAU1-202ENST00000347458 HSPA5P11021 654 aaKnown RBP14.83□□□□□ -0.03
STAU1-202ENST00000347458 GSE1Q14687 1217 aa14.83□□□□□ -0.04
STAU1-202ENST00000347458 RNF123Q5XPI4 1314 aa14.81□□□□□ -0.04
STAU1-202ENST00000347458 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
STAU1-202ENST00000347458 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
STAU1-202ENST00000347458 CNTLNQ9NXG0 1405 aa14.81□□□□□ -0.04
STAU1-202ENST00000347458 SMG6Q86US8 1419 aaKnown RBP14.81□□□□□ -0.04
STAU1-202ENST00000347458 LRRC9Q6ZRR7 1453 aa14.81□□□□□ -0.04
STAU1-202ENST00000347458 P3H3Q8IVL6 736 aa14.8□□□□□ -0.04
STAU1-202ENST00000347458 NCOA2Q15596 1464 aa14.79□□□□□ -0.04
STAU1-202ENST00000347458 KDM5BQ9UGL1 1544 aa14.79□□□□□ -0.04
STAU1-202ENST00000347458 ATP1B4Q9UN42 357 aaPredicted RBP14.78□□□□□ -0.04
STAU1-202ENST00000347458 NUDCQ9Y266 331 aa14.77□□□□□ -0.04
STAU1-202ENST00000347458 PDE4AP27815 886 aa14.77□□□□□ -0.05
STAU1-202ENST00000347458 FRAT1Q92837 279 aaPredicted RBP14.77□□□□□ -0.05
STAU1-202ENST00000347458 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
STAU1-202ENST00000347458 RSPH6AQ9H0K4 717 aa14.76□□□□□ -0.05
STAU1-202ENST00000347458 SENP3-EIF4A1A0A087X0R7 540 aa14.75□□□□□ -0.05
STAU1-202ENST00000347458 BACH2Q9BYV9 841 aa14.73□□□□□ -0.05
STAU1-202ENST00000347458 NFKBIBQ15653 356 aa14.73□□□□□ -0.05
STAU1-202ENST00000347458 TCERG1O14776 1098 aaKnown RBP14.72□□□□□ -0.05
STAU1-202ENST00000347458 EIF4G2P78344 907 aaKnown RBP eCLIP14.72□□□□□ -0.054e-8■■■□□ 18
STAU1-202ENST00000347458 CCDC18Q5T9S5 1454 aa14.71□□□□□ -0.06
STAU1-202ENST00000347458 BIVM-ERCC5R4GMW8 1640 aa14.71□□□□□ -0.06
STAU1-202ENST00000347458 CCDC7Q96M83 1385 aa14.69□□□□□ -0.06
STAU1-202ENST00000347458 UACAQ9BZF9 1416 aa14.69□□□□□ -0.06
STAU1-202ENST00000347458 FAM43AQ8N2R8 423 aa14.68□□□□□ -0.06
STAU1-202ENST00000347458 DCAF11Q8TEB1 546 aa14.67□□□□□ -0.06
STAU1-202ENST00000347458 NCOA1Q15788 1441 aa14.67□□□□□ -0.06
STAU1-202ENST00000347458 AQRO60306 1485 aaKnown RBP eCLIP14.67□□□□□ -0.062e-7■■■■■ 31.4
STAU1-202ENST00000347458 SLC4A3P48751 1232 aa14.67□□□□□ -0.06
STAU1-202ENST00000347458 EXOC6Q8TAG9 804 aa14.66□□□□□ -0.06
STAU1-202ENST00000347458 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
STAU1-202ENST00000347458 CNGB1Q14028 1251 aaPredicted RBP14.65□□□□□ -0.06
STAU1-202ENST00000347458 CUX1P39880 1505 aa14.64□□□□□ -0.07
STAU1-202ENST00000347458 MS4A1P11836 297 aa14.64□□□□□ -0.07
STAU1-202ENST00000347458 PTPRKQ15262 1439 aa14.63□□□□□ -0.07
STAU1-202ENST00000347458 ZMYND15Q9H091 742 aa14.63□□□□□ -0.07
STAU1-202ENST00000347458 NESP48681 1621 aa14.63□□□□□ -0.07
STAU1-202ENST00000347458 DDRGK1Q96HY6 314 aa14.62□□□□□ -0.07
STAU1-202ENST00000347458 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.62□□□□□ -0.075e-7■■■■■ 29.7
STAU1-202ENST00000347458 SKAP1Q86WV1 359 aa14.62□□□□□ -0.07
STAU1-202ENST00000347458 CFAP43Q8NDM7 1665 aa14.62□□□□□ -0.07
STAU1-202ENST00000347458 HFM1A2PYH4 1435 aa14.61□□□□□ -0.07
STAU1-202ENST00000347458 PTPN23Q9H3S7 1636 aa14.61□□□□□ -0.07
STAU1-202ENST00000347458 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
STAU1-202ENST00000347458 RRP1P56182 461 aaKnown RBP14.6□□□□□ -0.07
STAU1-202ENST00000347458 KIF7Q2M1P5 1343 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms