RNA–Protein interactions for RNA: ENST00000345201.6

PTK7-203, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best) BASIC

Gene PTK7, Length 4,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-203ENST00000345201 FHOD3Q2V2M9 1422 aa19.61■□□□□ 0.73
PTK7-203ENST00000345201 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
PTK7-203ENST00000345201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.735e-6■■■□□ 17.6
PTK7-203ENST00000345201 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
PTK7-203ENST00000345201 IGF1RP08069 1367 aa19.59■□□□□ 0.73
PTK7-203ENST00000345201 HNRNPUQ00839 825 aaKnown RBP eCLIP19.57■□□□□ 0.72
PTK7-203ENST00000345201 KDM2AQ9Y2K7 1162 aa19.57■□□□□ 0.72
PTK7-203ENST00000345201 CLSPNQ9HAW4 1339 aa19.56■□□□□ 0.72
PTK7-203ENST00000345201 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
PTK7-203ENST00000345201 RAB3GAP2Q9H2M9 1393 aa19.56■□□□□ 0.72
PTK7-203ENST00000345201 TSPY4P0CV99 314 aa19.56■□□□□ 0.72
PTK7-203ENST00000345201 TSPY10P0CW01 314 aa19.56■□□□□ 0.72
PTK7-203ENST00000345201 FKBP8Q14318 412 aa19.56■□□□□ 0.72
PTK7-203ENST00000345201 CFDP1Q9UEE9 299 aaPredicted RBP19.55■□□□□ 0.72
PTK7-203ENST00000345201 FAM9BQ8IZU0 186 aa19.54■□□□□ 0.72
PTK7-203ENST00000345201 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
PTK7-203ENST00000345201 KCNH8Q96L42 1107 aa19.53■□□□□ 0.72
PTK7-203ENST00000345201 PLEKHD1A6NEE1 506 aa19.52■□□□□ 0.72
PTK7-203ENST00000345201 ERCC6Q03468 1493 aa19.51■□□□□ 0.71
PTK7-203ENST00000345201 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
PTK7-203ENST00000345201 FGD5Q6ZNL6 1462 aa19.5■□□□□ 0.71
PTK7-203ENST00000345201 SETD5Q9C0A6 1442 aa19.5■□□□□ 0.71
PTK7-203ENST00000345201 FOXD1Q16676 465 aa19.47■□□□□ 0.71
PTK7-203ENST00000345201 EIF4G2P78344 907 aaKnown RBP eCLIP19.46■□□□□ 0.71
PTK7-203ENST00000345201 KIF21BO75037 1637 aa19.46■□□□□ 0.71
PTK7-203ENST00000345201 ARHGAP35Q9NRY4 1499 aa19.45■□□□□ 0.7
PTK7-203ENST00000345201 SENP3-EIF4A1A0A087X0R7 540 aa19.45■□□□□ 0.7
PTK7-203ENST00000345201 DHX57Q6P158 1386 aaKnown RBP19.44■□□□□ 0.7
PTK7-203ENST00000345201 CFTRP13569 1480 aa19.43■□□□□ 0.7
PTK7-203ENST00000345201 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
PTK7-203ENST00000345201 SALL2Q9Y467 1007 aaPredicted RBP19.4■□□□□ 0.7
PTK7-203ENST00000345201 RGL3Q3MIN7 710 aa19.4■□□□□ 0.7
PTK7-203ENST00000345201 MRS2Q9HD23 443 aa19.4■□□□□ 0.7
PTK7-203ENST00000345201 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
PTK7-203ENST00000345201 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
PTK7-203ENST00000345201 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
PTK7-203ENST00000345201 NESP48681 1621 aa19.37■□□□□ 0.69
PTK7-203ENST00000345201 CUX1P39880 1505 aa19.36■□□□□ 0.69
PTK7-203ENST00000345201 CHGAP10645 457 aaKnown RBP19.36■□□□□ 0.69
PTK7-203ENST00000345201 PRXQ9BXM0 1461 aa19.34■□□□□ 0.69
PTK7-203ENST00000345201 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
PTK7-203ENST00000345201 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
PTK7-203ENST00000345201 PHLDB1Q86UU1 1377 aa19.29■□□□□ 0.68
PTK7-203ENST00000345201 PPP1R15AO75807 674 aaPredicted RBP19.28■□□□□ 0.68
PTK7-203ENST00000345201 TMC1Q8TDI8 760 aa19.28■□□□□ 0.68
PTK7-203ENST00000345201 SENP3Q9H4L4 574 aaPredicted RBP19.26■□□□□ 0.67
PTK7-203ENST00000345201 NPM1P06748 294 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTK7-203ENST00000345201 MPHOSPH9Q99550 1183 aa19.24■□□□□ 0.67
PTK7-203ENST00000345201 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
PTK7-203ENST00000345201 TIMELESSQ9UNS1 1208 aa19.23■□□□□ 0.67
PTK7-203ENST00000345201 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
PTK7-203ENST00000345201 HSPA5P11021 654 aaKnown RBP19.21■□□□□ 0.67
PTK7-203ENST00000345201 AQRO60306 1485 aaKnown RBP eCLIP19.21■□□□□ 0.672e-6■■■■■ 31
PTK7-203ENST00000345201 CARD11Q9BXL7 1154 aa19.2■□□□□ 0.66
PTK7-203ENST00000345201 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
PTK7-203ENST00000345201 CC2D2AQ9P2K1 1620 aa19.2■□□□□ 0.66
PTK7-203ENST00000345201 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
PTK7-203ENST00000345201 PKD2Q13563 968 aa19.18■□□□□ 0.66
PTK7-203ENST00000345201 PEG3Q9GZU2 1588 aa19.17■□□□□ 0.66
PTK7-203ENST00000345201 L3MBTL2Q969R5 705 aa19.16■□□□□ 0.66
PTK7-203ENST00000345201 SUPT16HQ9Y5B9 1047 aaKnown RBP19.16■□□□□ 0.66
PTK7-203ENST00000345201 LRRC9Q6ZRR7 1453 aa19.15■□□□□ 0.66
PTK7-203ENST00000345201 DCAF11Q8TEB1 546 aa19.14■□□□□ 0.65
PTK7-203ENST00000345201 POLA1P09884 1462 aaPredicted RBP19.13■□□□□ 0.65
PTK7-203ENST00000345201 ZNF644Q9H582 1327 aaPredicted RBP19.12■□□□□ 0.65
PTK7-203ENST00000345201 MYT1Q01538 1121 aa19.12■□□□□ 0.65
PTK7-203ENST00000345201 DAXXQ9UER7 740 aaPredicted RBP19.11■□□□□ 0.65
PTK7-203ENST00000345201 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
PTK7-203ENST00000345201 HNRNPMP52272 730 aaKnown RBP eCLIP19.1■□□□□ 0.651e-6■■□□□ 14.4
PTK7-203ENST00000345201 CARMIL2Q6F5E8 1435 aa19.1■□□□□ 0.65
PTK7-203ENST00000345201 RRBP1Q9P2E9 1410 aaKnown RBP19.07■□□□□ 0.64
PTK7-203ENST00000345201 FGD6Q6ZV73 1430 aa19.06■□□□□ 0.64
PTK7-203ENST00000345201 NUP155O75694 1391 aa19.05■□□□□ 0.64
PTK7-203ENST00000345201 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
PTK7-203ENST00000345201 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.63
PTK7-203ENST00000345201 CASKIN1Q8WXD9 1431 aa19.02■□□□□ 0.63
PTK7-203ENST00000345201 STAG3Q9UJ98 1225 aa19■□□□□ 0.63
PTK7-203ENST00000345201 CCDC136Q96JN2 1154 aa19■□□□□ 0.63
PTK7-203ENST00000345201 CCER2I3L3R5 266 aa18.99■□□□□ 0.63
PTK7-203ENST00000345201 CANXP27824 592 aaKnown RBP18.98■□□□□ 0.63
PTK7-203ENST00000345201 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
PTK7-203ENST00000345201 MYOM3Q5VTT5 1437 aa18.97■□□□□ 0.63
PTK7-203ENST00000345201 ANKRD30AQ9BXX3 1397 aa18.96■□□□□ 0.63
PTK7-203ENST00000345201 BCL11AQ9H165 835 aa18.95■□□□□ 0.62
PTK7-203ENST00000345201 NCOA2Q15596 1464 aa18.95■□□□□ 0.62
PTK7-203ENST00000345201 CC2D1BQ5T0F9 858 aaKnown RBP18.95■□□□□ 0.62
PTK7-203ENST00000345201 WDR43Q15061 677 aaKnown RBP eCLIP18.94■□□□□ 0.62
PTK7-203ENST00000345201 FYCO1Q9BQS8 1478 aa18.89■□□□□ 0.62
PTK7-203ENST00000345201 TIAM1Q13009 1591 aa18.89■□□□□ 0.61
PTK7-203ENST00000345201 DNMBPQ6XZF7 1577 aa18.89■□□□□ 0.61
PTK7-203ENST00000345201 ESF1Q9H501 851 aaKnown RBP18.89■□□□□ 0.61
PTK7-203ENST00000345201 ABCA10Q8WWZ4 1543 aa18.88■□□□□ 0.61
PTK7-203ENST00000345201 PTPRGP23470 1445 aa18.87■□□□□ 0.61
PTK7-203ENST00000345201 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
PTK7-203ENST00000345201 RTL5Q5HYW3 569 aaPredicted RBP18.87■□□□□ 0.61
PTK7-203ENST00000345201 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
PTK7-203ENST00000345201 EFCAB2Q5VUJ9 269 aa18.86■□□□□ 0.61
PTK7-203ENST00000345201 B4GALNT3Q6L9W6 998 aa18.86■□□□□ 0.61
PTK7-203ENST00000345201 UACAQ9BZF9 1416 aa18.85■□□□□ 0.61
PTK7-203ENST00000345201 BIVM-ERCC5R4GMW8 1640 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms