RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 ERCC6L2Q5T890 1561 aa34.31■■■■□ 3.08
CEACAM3-201ENST00000344550 KIAA0586Q9BVV6 1533 aa34.3■■■■□ 3.08
CEACAM3-201ENST00000344550 PRG4Q92954 1404 aaPredicted RBP34.3■■■■□ 3.08
CEACAM3-201ENST00000344550 TRHP20396 242 aaPredicted RBP34.21■■■■□ 3.07
CEACAM3-201ENST00000344550 RAPGEF2Q9Y4G8 1499 aa34.07■■■■□ 3.05
CEACAM3-201ENST00000344550 IQGAP2Q13576 1575 aa33.98■■■■□ 3.03
CEACAM3-201ENST00000344550 CARMIL2Q6F5E8 1435 aa33.97■■■■□ 3.03
CEACAM3-201ENST00000344550 NPM1P06748 294 aaKnown RBP eCLIP33.88■■■■□ 3.01
CEACAM3-201ENST00000344550 PTPRGP23470 1445 aa33.87■■■■□ 3.01
CEACAM3-201ENST00000344550 TNIKQ9UKE5 1360 aa33.86■■■■□ 3.01
CEACAM3-201ENST00000344550 PRXQ9BXM0 1461 aa33.86■■■■□ 3.01
CEACAM3-201ENST00000344550 UGGT2Q9NYU1 1516 aa33.83■■■■□ 3.01
CEACAM3-201ENST00000344550 ADCY10Q96PN6 1610 aa33.78■■■■□ 3
CEACAM3-201ENST00000344550 MAPKBP1O60336 1514 aa33.77■■■■□ 3
CEACAM3-201ENST00000344550 EEA1Q15075 1411 aa33.77■■■■□ 3
CEACAM3-201ENST00000344550 DISP1Q96F81 1524 aa33.76■■■■□ 3
CEACAM3-201ENST00000344550 CSRNP3Q8WYN3 585 aa33.72■■■□□ 2.99
CEACAM3-201ENST00000344550 CTTNBP2Q8WZ74 1663 aa33.68■■■□□ 2.98
CEACAM3-201ENST00000344550 UHRF1BP1LA0JNW5 1464 aa33.67■■■□□ 2.98
CEACAM3-201ENST00000344550 ABCC10Q5T3U5 1492 aa33.66■■■□□ 2.98
CEACAM3-201ENST00000344550 GOLGA3Q08378 1498 aa33.65■■■□□ 2.98
CEACAM3-201ENST00000344550 KIAA0556O60303 1618 aa33.63■■■□□ 2.97
CEACAM3-201ENST00000344550 ABCC2Q92887 1545 aa33.63■■■□□ 2.97
CEACAM3-201ENST00000344550 UACAQ9BZF9 1416 aa33.62■■■□□ 2.97
CEACAM3-201ENST00000344550 KIF13AQ9H1H9 1805 aa33.59■■■□□ 2.97
CEACAM3-201ENST00000344550 FAM69CQ0P6D2 419 aa33.56■■■□□ 2.96
CEACAM3-201ENST00000344550 TTBK1Q5TCY1 1321 aaPredicted RBP33.54■■■□□ 2.96
CEACAM3-201ENST00000344550 DIP2BQ9P265 1576 aa33.51■■■□□ 2.96
CEACAM3-201ENST00000344550 PLB1Q6P1J6 1458 aa33.49■■■□□ 2.95
CEACAM3-201ENST00000344550 KDM5BQ9UGL1 1544 aa33.48■■■□□ 2.95
CEACAM3-201ENST00000344550 FAM9AQ8IZU1 332 aaPredicted RBP33.45■■■□□ 2.95
CEACAM3-201ENST00000344550 CHIC1Q5VXU3 224 aa33.44■■■□□ 2.94
CEACAM3-201ENST00000344550 ASXL2Q76L83 1435 aa33.42■■■□□ 2.94
CEACAM3-201ENST00000344550 GLI2P10070 1586 aa33.34■■■□□ 2.93
CEACAM3-201ENST00000344550 KIF21BO75037 1637 aa33.33■■■□□ 2.93
CEACAM3-201ENST00000344550 ABCA8O94911 1581 aa33.33■■■□□ 2.93
CEACAM3-201ENST00000344550 ZCCHC11Q5TAX3 1644 aaKnown RBP33.29■■■□□ 2.92
CEACAM3-201ENST00000344550 SAMD9Q5K651 1589 aa33.28■■■□□ 2.92
CEACAM3-201ENST00000344550 EPRSP07814 1512 aaKnown RBP33.23■■■□□ 2.91
CEACAM3-201ENST00000344550 WDR7Q9Y4E6 1490 aa33.2■■■□□ 2.91
CEACAM3-201ENST00000344550 P3H3Q8IVL6 736 aa33.16■■■□□ 2.9
CEACAM3-201ENST00000344550 TSPOAP1O95153 1857 aa33.12■■■□□ 2.89
CEACAM3-201ENST00000344550 EFCAB5A4FU69 1503 aa33.12■■■□□ 2.89
CEACAM3-201ENST00000344550 KDM6BO15054 1643 aa33.1■■■□□ 2.89
CEACAM3-201ENST00000344550 MAP3K4Q9Y6R4 1608 aa33.1■■■□□ 2.89
CEACAM3-201ENST00000344550 TEX14Q8IWB6 1497 aa33.07■■■□□ 2.88
CEACAM3-201ENST00000344550 ATP10BO94823 1461 aa33.05■■■□□ 2.88
CEACAM3-201ENST00000344550 PPRC1Q5VV67 1664 aaKnown RBP33.04■■■□□ 2.88
CEACAM3-201ENST00000344550 RAPGEF6Q8TEU7 1601 aa33.03■■■□□ 2.88
CEACAM3-201ENST00000344550 UBTFP17480 764 aaKnown RBP33.03■■■□□ 2.88
CEACAM3-201ENST00000344550 FHOD3Q2V2M9 1422 aa32.99■■■□□ 2.87
CEACAM3-201ENST00000344550 RANGAP1P46060 587 aaPredicted RBP32.96■■■□□ 2.87
CEACAM3-201ENST00000344550 MAGI3Q5TCQ9 1506 aa32.96■■■□□ 2.87
CEACAM3-201ENST00000344550 CFAP43Q8NDM7 1665 aa32.95■■■□□ 2.87
CEACAM3-201ENST00000344550 KCNH8Q96L42 1107 aa32.95■■■□□ 2.87
CEACAM3-201ENST00000344550 CD109Q6YHK3 1445 aa32.94■■■□□ 2.86
CEACAM3-201ENST00000344550 NUP153P49790 1475 aaKnown RBP32.93■■■□□ 2.86
CEACAM3-201ENST00000344550 AEBP2Q6ZN18 517 aaPredicted RBP32.86■■■□□ 2.85
CEACAM3-201ENST00000344550 ARID3CA6NKF2 412 aa32.84■■■□□ 2.85
CEACAM3-201ENST00000344550 FMN1Q68DA7 1419 aa32.84■■■□□ 2.85
CEACAM3-201ENST00000344550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.83■■■□□ 2.85
CEACAM3-201ENST00000344550 HNRNPUL2Q1KMD3 747 aaKnown RBP32.83■■■□□ 2.85
CEACAM3-201ENST00000344550 PHLDB1Q86UU1 1377 aa32.81■■■□□ 2.84
CEACAM3-201ENST00000344550 COL17A1Q9UMD9 1497 aaPredicted RBP32.8■■■□□ 2.84
CEACAM3-201ENST00000344550 ABCA9Q8IUA7 1624 aa32.8■■■□□ 2.84
CEACAM3-201ENST00000344550 ARHGAP35Q9NRY4 1499 aa32.8■■■□□ 2.84
CEACAM3-201ENST00000344550 PLEKHD1A6NEE1 506 aa32.79■■■□□ 2.84
CEACAM3-201ENST00000344550 EHMT2Q96KQ7 1210 aa32.76■■■□□ 2.83
CEACAM3-201ENST00000344550 ARAP3Q8WWN8 1544 aa32.69■■■□□ 2.82
CEACAM3-201ENST00000344550 NEO1Q92859 1461 aa32.65■■■□□ 2.82
CEACAM3-201ENST00000344550 HECW1Q76N89 1606 aa32.64■■■□□ 2.82
CEACAM3-201ENST00000344550 CDK11AQ9UQ88 783 aaPredicted RBP32.62■■■□□ 2.81
CEACAM3-201ENST00000344550 CDK13Q14004 1512 aaKnown RBP32.56■■■□□ 2.8
CEACAM3-201ENST00000344550 KDM4FA0A1W2PPD8 638 aa32.55■■■□□ 2.8
CEACAM3-201ENST00000344550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.52■■■□□ 2.8
CEACAM3-201ENST00000344550 ATP1B4Q9UN42 357 aaPredicted RBP32.52■■■□□ 2.8
CEACAM3-201ENST00000344550 CASKIN1Q8WXD9 1431 aa32.5■■■□□ 2.79
CEACAM3-201ENST00000344550 CLIP1P30622 1438 aa32.47■■■□□ 2.79
CEACAM3-201ENST00000344550 CFAP74Q9C0B2 1584 aa32.46■■■□□ 2.79
CEACAM3-201ENST00000344550 CCDC18Q5T9S5 1454 aa32.44■■■□□ 2.78
CEACAM3-201ENST00000344550 FANCAO15360 1455 aa32.43■■■□□ 2.78
CEACAM3-201ENST00000344550 TROQ12816 1431 aaPredicted RBP32.43■■■□□ 2.78
CEACAM3-201ENST00000344550 TTC37Q6PGP7 1564 aa32.41■■■□□ 2.78
CEACAM3-201ENST00000344550 PLCH2O75038 1416 aa32.41■■■□□ 2.78
CEACAM3-201ENST00000344550 AKNAQ7Z591 1439 aa32.41■■■□□ 2.78
CEACAM3-201ENST00000344550 ADGRL1O94910 1474 aa32.4■■■□□ 2.78
CEACAM3-201ENST00000344550 FYCO1Q9BQS8 1478 aa32.39■■■□□ 2.78
CEACAM3-201ENST00000344550 RAPGEF3O95398 923 aa32.37■■■□□ 2.77
CEACAM3-201ENST00000344550 DENND4BO75064 1496 aaPredicted RBP32.36■■■□□ 2.77
CEACAM3-201ENST00000344550 PCF11O94913 1555 aaKnown RBP32.35■■■□□ 2.77
CEACAM3-201ENST00000344550 KIF14Q15058 1648 aa32.34■■■□□ 2.77
CEACAM3-201ENST00000344550 EFCAB2Q5VUJ9 269 aa32.32■■■□□ 2.76
CEACAM3-201ENST00000344550 LRRIQ1Q96JM4 1722 aa32.3■■■□□ 2.76
CEACAM3-201ENST00000344550 FRMPD1Q5SYB0 1578 aa32.29■■■□□ 2.76
CEACAM3-201ENST00000344550 MYO5CQ9NQX4 1742 aa32.26■■■□□ 2.76
CEACAM3-201ENST00000344550 RICTORQ6R327 1708 aa32.25■■■□□ 2.75
CEACAM3-201ENST00000344550 MAGI2Q86UL8 1455 aa32.24■■■□□ 2.75
CEACAM3-201ENST00000344550 ZMYM4Q5VZL5 1548 aa32.23■■■□□ 2.75
CEACAM3-201ENST00000344550 SCAPERQ9BY12 1400 aa32.2■■■□□ 2.75
CEACAM3-201ENST00000344550 CEP162Q5TB80 1403 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms