RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 JPH4Q96JJ6 628 aa29.11■■■□□ 2.25
CD55-202ENST00000343420 PRG4Q92954 1404 aaPredicted RBP29.09■■■□□ 2.25
CD55-202ENST00000343420 CARMIL1Q5VZK9 1371 aa29.06■■■□□ 2.24
CD55-202ENST00000343420 KIAA0586Q9BVV6 1533 aa29.03■■■□□ 2.24
CD55-202ENST00000343420 RAPGEF2Q9Y4G8 1499 aa28.84■■■□□ 2.21
CD55-202ENST00000343420 IQGAP2Q13576 1575 aa28.8■■■□□ 2.2
CD55-202ENST00000343420 CARMIL2Q6F5E8 1435 aa28.74■■■□□ 2.19
CD55-202ENST00000343420 ADCY10Q96PN6 1610 aa28.72■■■□□ 2.19
CD55-202ENST00000343420 NPM1P06748 294 aaKnown RBP eCLIP28.69■■■□□ 2.18
CD55-202ENST00000343420 PTPRGP23470 1445 aa28.69■■■□□ 2.18
CD55-202ENST00000343420 TNIKQ9UKE5 1360 aa28.68■■■□□ 2.18
CD55-202ENST00000343420 KIF13AQ9H1H9 1805 aa28.64■■■□□ 2.18
CD55-202ENST00000343420 UGGT2Q9NYU1 1516 aa28.64■■■□□ 2.17
CD55-202ENST00000343420 PRXQ9BXM0 1461 aa28.63■■■□□ 2.17
CD55-202ENST00000343420 MAPKBP1O60336 1514 aa28.63■■■□□ 2.17
CD55-202ENST00000343420 DISP1Q96F81 1524 aa28.63■■■□□ 2.17
CD55-202ENST00000343420 CTTNBP2Q8WZ74 1663 aa28.62■■■□□ 2.17
CD55-202ENST00000343420 TTBK1Q5TCY1 1321 aaPredicted RBP28.59■■■□□ 2.17
CD55-202ENST00000343420 KIAA0556O60303 1618 aa28.54■■■□□ 2.16
CD55-202ENST00000343420 ABCC10Q5T3U5 1492 aa28.54■■■□□ 2.16
CD55-202ENST00000343420 CSRNP3Q8WYN3 585 aa28.5■■■□□ 2.15
CD55-202ENST00000343420 ABCC2Q92887 1545 aa28.49■■■□□ 2.15
CD55-202ENST00000343420 UHRF1BP1LA0JNW5 1464 aa28.49■■■□□ 2.15
CD55-202ENST00000343420 FAM69CQ0P6D2 419 aa28.49■■■□□ 2.15
CD55-202ENST00000343420 UACAQ9BZF9 1416 aa28.49■■■□□ 2.15
CD55-202ENST00000343420 DIP2BQ9P265 1576 aa28.49■■■□□ 2.15
CD55-202ENST00000343420 EEA1Q15075 1411 aa28.46■■■□□ 2.15
CD55-202ENST00000343420 GOLGA3Q08378 1498 aa28.45■■■□□ 2.14
CD55-202ENST00000343420 PLB1Q6P1J6 1458 aa28.35■■■□□ 2.13
CD55-202ENST00000343420 KDM5BQ9UGL1 1544 aa28.35■■■□□ 2.13
CD55-202ENST00000343420 ASXL2Q76L83 1435 aa28.35■■■□□ 2.13
CD55-202ENST00000343420 ZCCHC11Q5TAX3 1644 aaKnown RBP28.31■■■□□ 2.12
CD55-202ENST00000343420 TSPOAP1O95153 1857 aa28.31■■■□□ 2.12
CD55-202ENST00000343420 FAM9AQ8IZU1 332 aaPredicted RBP28.28■■■□□ 2.12
CD55-202ENST00000343420 CHIC1Q5VXU3 224 aa28.27■■■□□ 2.12
CD55-202ENST00000343420 ABCA8O94911 1581 aa28.26■■■□□ 2.11
CD55-202ENST00000343420 GLI2P10070 1586 aa28.26■■■□□ 2.11
CD55-202ENST00000343420 SAMD9Q5K651 1589 aa28.21■■■□□ 2.11
CD55-202ENST00000343420 KIF21BO75037 1637 aa28.21■■■□□ 2.11
CD55-202ENST00000343420 EPRSP07814 1512 aaKnown RBP28.19■■■□□ 2.1
CD55-202ENST00000343420 P3H3Q8IVL6 736 aa28.18■■■□□ 2.1
CD55-202ENST00000343420 KDM6BO15054 1643 aa28.15■■■□□ 2.1
CD55-202ENST00000343420 PPRC1Q5VV67 1664 aaKnown RBP28.14■■■□□ 2.1
CD55-202ENST00000343420 WDR7Q9Y4E6 1490 aa28.14■■■□□ 2.09
CD55-202ENST00000343420 MAP3K4Q9Y6R4 1608 aa28.11■■■□□ 2.09
CD55-202ENST00000343420 RANGAP1P46060 587 aaPredicted RBP28.06■■■□□ 2.08
CD55-202ENST00000343420 RAPGEF6Q8TEU7 1601 aa28.03■■■□□ 2.08
CD55-202ENST00000343420 ATP10BO94823 1461 aa28.02■■■□□ 2.08
CD55-202ENST00000343420 EFCAB5A4FU69 1503 aa28.01■■■□□ 2.07
CD55-202ENST00000343420 TEX14Q8IWB6 1497 aa28.01■■■□□ 2.07
CD55-202ENST00000343420 FHOD3Q2V2M9 1422 aa28.01■■■□□ 2.07
CD55-202ENST00000343420 KCNH8Q96L42 1107 aa27.99■■■□□ 2.07
CD55-202ENST00000343420 CFAP43Q8NDM7 1665 aa27.98■■■□□ 2.07
CD55-202ENST00000343420 ARID3CA6NKF2 412 aa27.98■■■□□ 2.07
CD55-202ENST00000343420 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
CD55-202ENST00000343420 UBTFP17480 764 aaKnown RBP27.96■■■□□ 2.07
CD55-202ENST00000343420 EHMT2Q96KQ7 1210 aa27.94■■■□□ 2.06
CD55-202ENST00000343420 CD109Q6YHK3 1445 aa27.92■■■□□ 2.06
CD55-202ENST00000343420 MAGI3Q5TCQ9 1506 aa27.91■■■□□ 2.06
CD55-202ENST00000343420 NUP153P49790 1475 aaKnown RBP27.9■■■□□ 2.06
CD55-202ENST00000343420 COL17A1Q9UMD9 1497 aaPredicted RBP27.89■■■□□ 2.05
CD55-202ENST00000343420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.86■■■□□ 2.05
CD55-202ENST00000343420 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
CD55-202ENST00000343420 ABCA9Q8IUA7 1624 aa27.81■■■□□ 2.04
CD55-202ENST00000343420 ARHGAP35Q9NRY4 1499 aa27.78■■■□□ 2.04
CD55-202ENST00000343420 FMN1Q68DA7 1419 aa27.75■■■□□ 2.03
CD55-202ENST00000343420 PLEKHD1A6NEE1 506 aa27.74■■■□□ 2.03
CD55-202ENST00000343420 KDM4FA0A1W2PPD8 638 aa27.68■■■□□ 2.02
CD55-202ENST00000343420 PHLDB1Q86UU1 1377 aa27.68■■■□□ 2.02
CD55-202ENST00000343420 ARAP3Q8WWN8 1544 aa27.67■■■□□ 2.02
CD55-202ENST00000343420 HECW1Q76N89 1606 aa27.67■■■□□ 2.02
CD55-202ENST00000343420 CDK13Q14004 1512 aaKnown RBP27.67■■■□□ 2.02
CD55-202ENST00000343420 NEO1Q92859 1461 aa27.63■■■□□ 2.01
CD55-202ENST00000343420 ATP1B4Q9UN42 357 aaPredicted RBP27.62■■■□□ 2.01
CD55-202ENST00000343420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.6■■■□□ 2.017e-8■■■□□ 15.9
CD55-202ENST00000343420 ADGRL1O94910 1474 aa27.56■■■□□ 2
CD55-202ENST00000343420 TTC37Q6PGP7 1564 aa27.55■■■□□ 2
CD55-202ENST00000343420 CDK11AQ9UQ88 783 aaPredicted RBP27.54■■■□□ 2
CD55-202ENST00000343420 LRRIQ1Q96JM4 1722 aa27.52■■■□□ 2
CD55-202ENST00000343420 CFAP74Q9C0B2 1584 aa27.52■■■□□ 2
CD55-202ENST00000343420 RAPGEF3O95398 923 aa27.49■■□□□ 1.99
CD55-202ENST00000343420 FANCAO15360 1455 aa27.49■■□□□ 1.99
CD55-202ENST00000343420 AKNAQ7Z591 1439 aa27.48■■□□□ 1.99
CD55-202ENST00000343420 CASKIN1Q8WXD9 1431 aa27.48■■□□□ 1.99
CD55-202ENST00000343420 CLIP1P30622 1438 aa27.47■■□□□ 1.99
CD55-202ENST00000343420 PCF11O94913 1555 aaKnown RBP27.47■■□□□ 1.99
CD55-202ENST00000343420 FRMPD1Q5SYB0 1578 aa27.46■■□□□ 1.99
CD55-202ENST00000343420 TROQ12816 1431 aaPredicted RBP27.44■■□□□ 1.98
CD55-202ENST00000343420 PLCH2O75038 1416 aa27.43■■□□□ 1.98
CD55-202ENST00000343420 DENND4BO75064 1496 aaPredicted RBP27.43■■□□□ 1.98
CD55-202ENST00000343420 CCDC18Q5T9S5 1454 aa27.42■■□□□ 1.98
CD55-202ENST00000343420 KIF14Q15058 1648 aa27.41■■□□□ 1.98
CD55-202ENST00000343420 RICTORQ6R327 1708 aa27.41■■□□□ 1.98
CD55-202ENST00000343420 MYO5CQ9NQX4 1742 aa27.41■■□□□ 1.98
CD55-202ENST00000343420 FYCO1Q9BQS8 1478 aa27.38■■□□□ 1.97
CD55-202ENST00000343420 EFCAB2Q5VUJ9 269 aa27.33■■□□□ 1.97
CD55-202ENST00000343420 ZMYM4Q5VZL5 1548 aa27.31■■□□□ 1.96
CD55-202ENST00000343420 ARHGEF40Q8TER5 1519 aa27.31■■□□□ 1.96
CD55-202ENST00000343420 SCAPERQ9BY12 1400 aa27.3■■□□□ 1.96
CD55-202ENST00000343420 ARHGAP5Q13017 1502 aa27.26■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 264.4 ms