RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 ABCC10Q5T3U5 1492 aa30.52■■■□□ 2.48
TRA2B-202ENST00000342294 FAM69CQ0P6D2 419 aa30.51■■■□□ 2.47
TRA2B-202ENST00000342294 MAPKBP1O60336 1514 aa30.44■■■□□ 2.46
TRA2B-202ENST00000342294 NPM1P06748 294 aaKnown RBP eCLIP30.43■■■□□ 2.46
TRA2B-202ENST00000342294 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
TRA2B-202ENST00000342294 DIP2BQ9P265 1576 aa30.38■■■□□ 2.45
TRA2B-202ENST00000342294 ADCY10Q96PN6 1610 aa30.35■■■□□ 2.45
TRA2B-202ENST00000342294 KDM4FA0A1W2PPD8 638 aa30.32■■■□□ 2.44
TRA2B-202ENST00000342294 KIAA0586Q9BVV6 1533 aa30.27■■■□□ 2.44
TRA2B-202ENST00000342294 KDM6BO15054 1643 aa30.23■■■□□ 2.43
TRA2B-202ENST00000342294 IGF1RP08069 1367 aa30.21■■■□□ 2.43
TRA2B-202ENST00000342294 PTPRGP23470 1445 aa30.1■■■□□ 2.41
TRA2B-202ENST00000342294 TSPOAP1O95153 1857 aa30.09■■■□□ 2.41
TRA2B-202ENST00000342294 KIF27Q86VH2 1401 aa30.08■■■□□ 2.41
TRA2B-202ENST00000342294 CUL7Q14999 1698 aa30.05■■■□□ 2.4
TRA2B-202ENST00000342294 ABCC2Q92887 1545 aa30.01■■■□□ 2.4
TRA2B-202ENST00000342294 TNIKQ9UKE5 1360 aa30■■■□□ 2.39
TRA2B-202ENST00000342294 ASXL2Q76L83 1435 aa29.97■■■□□ 2.39
TRA2B-202ENST00000342294 PLB1Q6P1J6 1458 aa29.96■■■□□ 2.39
TRA2B-202ENST00000342294 ILDR1Q86SU0 546 aaPredicted RBP29.96■■■□□ 2.39
TRA2B-202ENST00000342294 GLI2P10070 1586 aa29.95■■■□□ 2.39
TRA2B-202ENST00000342294 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.39
TRA2B-202ENST00000342294 CARMIL2Q6F5E8 1435 aa29.95■■■□□ 2.38
TRA2B-202ENST00000342294 TTBK1Q5TCY1 1321 aaPredicted RBP29.95■■■□□ 2.38
TRA2B-202ENST00000342294 PPRC1Q5VV67 1664 aaKnown RBP29.92■■■□□ 2.38
TRA2B-202ENST00000342294 UHRF1BP1LA0JNW5 1464 aa29.92■■■□□ 2.38
TRA2B-202ENST00000342294 ADGRL1O94910 1474 aa29.86■■■□□ 2.37
TRA2B-202ENST00000342294 COL17A1Q9UMD9 1497 aaPredicted RBP29.86■■■□□ 2.37
TRA2B-202ENST00000342294 UACAQ9BZF9 1416 aa29.85■■■□□ 2.37
TRA2B-202ENST00000342294 IQGAP2Q13576 1575 aa29.83■■■□□ 2.37
TRA2B-202ENST00000342294 DISP1Q96F81 1524 aa29.81■■■□□ 2.36
TRA2B-202ENST00000342294 EPRSP07814 1512 aaKnown RBP29.79■■■□□ 2.36
TRA2B-202ENST00000342294 KDM5BQ9UGL1 1544 aa29.78■■■□□ 2.36
TRA2B-202ENST00000342294 MAP3K4Q9Y6R4 1608 aa29.73■■■□□ 2.35
TRA2B-202ENST00000342294 TEX14Q8IWB6 1497 aa29.7■■■□□ 2.35
TRA2B-202ENST00000342294 UGGT2Q9NYU1 1516 aa29.68■■■□□ 2.34
TRA2B-202ENST00000342294 ZCCHC11Q5TAX3 1644 aaKnown RBP29.63■■■□□ 2.33
TRA2B-202ENST00000342294 HECW2Q9P2P5 1572 aa29.62■■■□□ 2.33
TRA2B-202ENST00000342294 RAPGEF2Q9Y4G8 1499 aa29.59■■■□□ 2.33
TRA2B-202ENST00000342294 KIAA0556O60303 1618 aa29.57■■■□□ 2.32
TRA2B-202ENST00000342294 WDR7Q9Y4E6 1490 aa29.57■■■□□ 2.32
TRA2B-202ENST00000342294 MAGI3Q5TCQ9 1506 aa29.49■■■□□ 2.31
TRA2B-202ENST00000342294 CD109Q6YHK3 1445 aa29.46■■■□□ 2.31
TRA2B-202ENST00000342294 KCNH8Q96L42 1107 aa29.39■■■□□ 2.3
TRA2B-202ENST00000342294 ABCA8O94911 1581 aa29.39■■■□□ 2.29
TRA2B-202ENST00000342294 CFAP43Q8NDM7 1665 aa29.38■■■□□ 2.29
TRA2B-202ENST00000342294 GOLGA3Q08378 1498 aa29.35■■■□□ 2.29
TRA2B-202ENST00000342294 ARAP3Q8WWN8 1544 aa29.28■■■□□ 2.28
TRA2B-202ENST00000342294 CTTNBP2Q8WZ74 1663 aa29.27■■■□□ 2.28
TRA2B-202ENST00000342294 KIF21BO75037 1637 aa29.25■■■□□ 2.27
TRA2B-202ENST00000342294 FBXO41Q8TF61 875 aa29.21■■■□□ 2.27
TRA2B-202ENST00000342294 PRXQ9BXM0 1461 aa29.18■■■□□ 2.26
TRA2B-202ENST00000342294 ATP10BO94823 1461 aa29.17■■■□□ 2.26
TRA2B-202ENST00000342294 PHLDB1Q86UU1 1377 aa29.16■■■□□ 2.26
TRA2B-202ENST00000342294 PTPRMP28827 1452 aa29.14■■■□□ 2.26
TRA2B-202ENST00000342294 ADAMTSL3P82987 1691 aa29.12■■■□□ 2.25
TRA2B-202ENST00000342294 ARID3CA6NKF2 412 aa29.1■■■□□ 2.25
TRA2B-202ENST00000342294 ABCA9Q8IUA7 1624 aa29.09■■■□□ 2.25
TRA2B-202ENST00000342294 RAPGEF3O95398 923 aa29.07■■■□□ 2.24
TRA2B-202ENST00000342294 P3H3Q8IVL6 736 aa29.04■■■□□ 2.24
TRA2B-202ENST00000342294 FAM9AQ8IZU1 332 aaPredicted RBP29.04■■■□□ 2.24
TRA2B-202ENST00000342294 NEO1Q92859 1461 aa29.04■■■□□ 2.24
TRA2B-202ENST00000342294 FRMPD1Q5SYB0 1578 aa28.96■■■□□ 2.23
TRA2B-202ENST00000342294 BCORL1Q5H9F3 1711 aa28.95■■■□□ 2.23
TRA2B-202ENST00000342294 PCF11O94913 1555 aaKnown RBP28.94■■■□□ 2.22
TRA2B-202ENST00000342294 LMTK3Q96Q04 1460 aa28.93■■■□□ 2.22
TRA2B-202ENST00000342294 ARID4BQ4LE39 1312 aaPredicted RBP28.92■■■□□ 2.22
TRA2B-202ENST00000342294 MADDQ8WXG6 1647 aa28.91■■■□□ 2.22
TRA2B-202ENST00000342294 SAMD9Q5K651 1589 aa28.91■■■□□ 2.22
TRA2B-202ENST00000342294 RAPGEF6Q8TEU7 1601 aa28.89■■■□□ 2.22
TRA2B-202ENST00000342294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.86■■■□□ 2.21
TRA2B-202ENST00000342294 HNRNPUL2Q1KMD3 747 aaKnown RBP28.86■■■□□ 2.21
TRA2B-202ENST00000342294 NUP153P49790 1475 aaKnown RBP28.85■■■□□ 2.21
TRA2B-202ENST00000342294 ARHGEF40Q8TER5 1519 aa28.82■■■□□ 2.2
TRA2B-202ENST00000342294 DENND4BO75064 1496 aaPredicted RBP28.81■■■□□ 2.2
TRA2B-202ENST00000342294 FHOD3Q2V2M9 1422 aa28.8■■■□□ 2.2
TRA2B-202ENST00000342294 CSRNP3Q8WYN3 585 aa28.79■■■□□ 2.2
TRA2B-202ENST00000342294 AKNAQ7Z591 1439 aa28.77■■■□□ 2.2
TRA2B-202ENST00000342294 RIMS1Q86UR5 1692 aaKnown RBP28.76■■■□□ 2.19
TRA2B-202ENST00000342294 RICTORQ6R327 1708 aa28.75■■■□□ 2.19
TRA2B-202ENST00000342294 PLEKHD1A6NEE1 506 aa28.75■■■□□ 2.19
TRA2B-202ENST00000342294 HSPA2P54652 639 aa28.75■■■□□ 2.19
TRA2B-202ENST00000342294 FANCAO15360 1455 aa28.72■■■□□ 2.19
TRA2B-202ENST00000342294 POGZQ7Z3K3 1410 aa28.69■■■□□ 2.18
TRA2B-202ENST00000342294 ZMYM4Q5VZL5 1548 aa28.69■■■□□ 2.18
TRA2B-202ENST00000342294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.69■■■□□ 2.182e-9■■■□□ 17.4
TRA2B-202ENST00000342294 YEATS2Q9ULM3 1422 aa28.68■■■□□ 2.18
TRA2B-202ENST00000342294 CFAP74Q9C0B2 1584 aa28.65■■■□□ 2.18
TRA2B-202ENST00000342294 SIGLEC1Q9BZZ2 1709 aa28.64■■■□□ 2.18
TRA2B-202ENST00000342294 CERKQ8TCT0 537 aa28.64■■■□□ 2.18
TRA2B-202ENST00000342294 MAGI2Q86UL8 1455 aa28.64■■■□□ 2.17
TRA2B-202ENST00000342294 ZFYVE16Q7Z3T8 1539 aa28.64■■■□□ 2.17
TRA2B-202ENST00000342294 RANGAP1P46060 587 aaPredicted RBP28.62■■■□□ 2.17
TRA2B-202ENST00000342294 PLPPR3Q6T4P5 718 aa28.62■■■□□ 2.17
TRA2B-202ENST00000342294 EFCAB5A4FU69 1503 aa28.62■■■□□ 2.17
TRA2B-202ENST00000342294 TTC37Q6PGP7 1564 aa28.61■■■□□ 2.17
TRA2B-202ENST00000342294 MLECQ14165 292 aa28.56■■■□□ 2.16
TRA2B-202ENST00000342294 HECW1Q76N89 1606 aa28.56■■■□□ 2.16
TRA2B-202ENST00000342294 SCAPERQ9BY12 1400 aa28.54■■■□□ 2.16
TRA2B-202ENST00000342294 PLCH2O75038 1416 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms