RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 NISCHQ9Y2I1 1504 aa43.28■■■■■ 4.52
TRA2B-202ENST00000342294 ABCC9O60706 1549 aa39.6■■■■□ 3.93
TRA2B-202ENST00000342294 CCDC180Q9P1Z9 1646 aa39.01■■■■□ 3.84
TRA2B-202ENST00000342294 DNAJC5BQ9UF47 199 aa37.78■■■■□ 3.64
TRA2B-202ENST00000342294 RB1CC1Q8TDY2 1594 aa37.43■■■■□ 3.58
TRA2B-202ENST00000342294 NACADO15069 1562 aa37.07■■■■□ 3.52
TRA2B-202ENST00000342294 PABPN1Q86U42 306 aaKnown RBP eCLIP36.82■■■■□ 3.48
TRA2B-202ENST00000342294 DCAF8L2P0C7V8 631 aa36.72■■■■□ 3.47
TRA2B-202ENST00000342294 UNC13AQ9UPW8 1703 aa36.51■■■■□ 3.44
TRA2B-202ENST00000342294 MYO15BQ96JP2 1530 aa36.43■■■■□ 3.42
TRA2B-202ENST00000342294 BICRAQ9NZM4 1560 aa36.42■■■■□ 3.42
TRA2B-202ENST00000342294 SHROOM4Q9ULL8 1493 aa35.87■■■■□ 3.33
TRA2B-202ENST00000342294 ZCCHC6Q5VYS8 1495 aaKnown RBP35.75■■■■□ 3.31
TRA2B-202ENST00000342294 CECR2Q9BXF3 1484 aa35.75■■■■□ 3.31
TRA2B-202ENST00000342294 DCAF1Q9Y4B6 1507 aa35.74■■■■□ 3.31
TRA2B-202ENST00000342294 CC2D2AQ9P2K1 1620 aa35.73■■■■□ 3.31
TRA2B-202ENST00000342294 EIF4G1Q04637 1599 aaKnown RBP35.54■■■■□ 3.28
TRA2B-202ENST00000342294 SCRIBQ14160 1630 aa35.49■■■■□ 3.27
TRA2B-202ENST00000342294 DNAJC5Q9H3Z4 198 aa35.09■■■■□ 3.21
TRA2B-202ENST00000342294 CUX2O14529 1486 aa34.39■■■■□ 3.1
TRA2B-202ENST00000342294 NCAPD3P42695 1498 aa34.29■■■■□ 3.08
TRA2B-202ENST00000342294 ERCC6Q03468 1493 aa34.2■■■■□ 3.06
TRA2B-202ENST00000342294 ATAD2BQ9ULI0 1458 aa34.08■■■■□ 3.05
TRA2B-202ENST00000342294 HMGXB3Q12766 1538 aa33.92■■■■□ 3.02
TRA2B-202ENST00000342294 SMARCA2P51531 1590 aa33.9■■■■□ 3.02
TRA2B-202ENST00000342294 NESP48681 1621 aa33.88■■■■□ 3.01
TRA2B-202ENST00000342294 SMARCA4P51532 1647 aa33.84■■■■□ 3.01
TRA2B-202ENST00000342294 BAZ1BQ9UIG0 1483 aaKnown RBP33.67■■■□□ 2.98
TRA2B-202ENST00000342294 THOC2Q8NI27 1593 aaKnown RBP33.62■■■□□ 2.97
TRA2B-202ENST00000342294 BAZ1AQ9NRL2 1556 aaPredicted RBP33.6■■■□□ 2.97
TRA2B-202ENST00000342294 PEG3Q9GZU2 1588 aa33.57■■■□□ 2.96
TRA2B-202ENST00000342294 LAMC3Q9Y6N6 1575 aa33.53■■■□□ 2.96
TRA2B-202ENST00000342294 PDS5BQ9NTI5 1447 aa33.38■■■□□ 2.93
TRA2B-202ENST00000342294 MROH2BQ7Z745 1585 aa33.34■■■□□ 2.93
TRA2B-202ENST00000342294 KIF21AQ7Z4S6 1674 aa33.33■■■□□ 2.93
TRA2B-202ENST00000342294 TRIM41Q8WV44 630 aa33.21■■■□□ 2.91
TRA2B-202ENST00000342294 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
TRA2B-202ENST00000342294 MRC2Q9UBG0 1479 aa33.12■■■□□ 2.89
TRA2B-202ENST00000342294 WDR62O43379 1518 aa33.06■■■□□ 2.88
TRA2B-202ENST00000342294 CEP164Q9UPV0 1460 aa32.86■■■□□ 2.85
TRA2B-202ENST00000342294 WIZO95785 1651 aa32.85■■■□□ 2.85
TRA2B-202ENST00000342294 FANCD2Q9BXW9 1451 aa32.8■■■□□ 2.84
TRA2B-202ENST00000342294 OSCARQ8IYS5 282 aa32.75■■■□□ 2.83
TRA2B-202ENST00000342294 CFTRP13569 1480 aa32.71■■■□□ 2.83
TRA2B-202ENST00000342294 URB2Q14146 1524 aaKnown RBP32.58■■■□□ 2.81
TRA2B-202ENST00000342294 RSF1Q96T23 1441 aaPredicted RBP32.48■■■□□ 2.79
TRA2B-202ENST00000342294 TOP2AP11388 1531 aaKnown RBP32.43■■■□□ 2.78
TRA2B-202ENST00000342294 RIMBP3CA6NJZ7 1639 aa32.32■■■□□ 2.76
TRA2B-202ENST00000342294 RIMBP3BA6NNM3 1639 aa32.32■■■□□ 2.76
TRA2B-202ENST00000342294 RIMBP3Q9UFD9 1639 aa32.32■■■□□ 2.76
TRA2B-202ENST00000342294 ZNF608Q9ULD9 1512 aaPredicted RBP32.26■■■□□ 2.76
TRA2B-202ENST00000342294 IFT140Q96RY7 1462 aa32.25■■■□□ 2.75
TRA2B-202ENST00000342294 ARHGEF11O15085 1522 aa32.19■■■□□ 2.74
TRA2B-202ENST00000342294 PRDM2Q13029 1718 aa32.16■■■□□ 2.74
TRA2B-202ENST00000342294 TOPBP1Q92547 1522 aa32.11■■■□□ 2.73
TRA2B-202ENST00000342294 CCDC88BA6NC98 1476 aa32.1■■■□□ 2.73
TRA2B-202ENST00000342294 ABCC8Q09428 1581 aa32■■■□□ 2.71
TRA2B-202ENST00000342294 CYB5RLQ6IPT4 315 aa32■■■□□ 2.71
TRA2B-202ENST00000342294 EIF4G3O43432 1585 aaKnown RBP31.98■■■□□ 2.71
TRA2B-202ENST00000342294 DNMBPQ6XZF7 1577 aa31.91■■■□□ 2.7
TRA2B-202ENST00000342294 AQRO60306 1485 aaKnown RBP eCLIP31.9■■■□□ 2.74e-16■■■■□ 25.6
TRA2B-202ENST00000342294 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
TRA2B-202ENST00000342294 ARAP1Q96P48 1450 aa31.85■■■□□ 2.69
TRA2B-202ENST00000342294 CHD1O14646 1710 aa31.81■■■□□ 2.68
TRA2B-202ENST00000342294 TRHP20396 242 aaPredicted RBP31.79■■■□□ 2.68
TRA2B-202ENST00000342294 FBLN2P98095 1184 aa31.75■■■□□ 2.67
TRA2B-202ENST00000342294 POLA1P09884 1462 aaPredicted RBP31.75■■■□□ 2.67
TRA2B-202ENST00000342294 RAD54L2Q9Y4B4 1467 aa31.65■■■□□ 2.66
TRA2B-202ENST00000342294 TDRD9Q8NDG6 1382 aaKnown RBP31.63■■■□□ 2.65
TRA2B-202ENST00000342294 SOGA1O94964 1423 aa31.6■■■□□ 2.65
TRA2B-202ENST00000342294 CLASP1Q7Z460 1538 aa31.54■■■□□ 2.64
TRA2B-202ENST00000342294 SNAPC4Q5SXM2 1469 aa31.52■■■□□ 2.64
TRA2B-202ENST00000342294 WDR97A6NE52 1622 aa31.47■■■□□ 2.63
TRA2B-202ENST00000342294 CHMP7Q8WUX9 453 aaPredicted RBP31.46■■■□□ 2.63
TRA2B-202ENST00000342294 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
TRA2B-202ENST00000342294 MAGI1Q96QZ7 1491 aaPredicted RBP31.44■■■□□ 2.62
TRA2B-202ENST00000342294 SYNJ1O43426 1573 aa31.41■■■□□ 2.62
TRA2B-202ENST00000342294 GRIN2BQ13224 1484 aa31.38■■■□□ 2.61
TRA2B-202ENST00000342294 CUX1P39880 1505 aa31.35■■■□□ 2.61
TRA2B-202ENST00000342294 SYNJ2O15056 1496 aa31.35■■■□□ 2.61
TRA2B-202ENST00000342294 AEBP2Q6ZN18 517 aaPredicted RBP31.26■■■□□ 2.59
TRA2B-202ENST00000342294 GAPVD1Q14C86 1478 aa31.24■■■□□ 2.59
TRA2B-202ENST00000342294 PBRM1Q86U86 1689 aa31.11■■■□□ 2.57
TRA2B-202ENST00000342294 ABCA10Q8WWZ4 1543 aa31.09■■■□□ 2.57
TRA2B-202ENST00000342294 ABCA5Q8WWZ7 1642 aa31.05■■■□□ 2.56
TRA2B-202ENST00000342294 ERCC6L2Q5T890 1561 aa31■■■□□ 2.55
TRA2B-202ENST00000342294 GRIN2AQ12879 1464 aa30.98■■■□□ 2.55
TRA2B-202ENST00000342294 NUP160Q12769 1436 aa30.94■■■□□ 2.54
TRA2B-202ENST00000342294 CEP170Q5SW79 1584 aa30.9■■■□□ 2.54
TRA2B-202ENST00000342294 ADAMTS12P58397 1594 aa30.85■■■□□ 2.53
TRA2B-202ENST00000342294 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
TRA2B-202ENST00000342294 SHROOM2Q13796 1616 aa30.81■■■□□ 2.52
TRA2B-202ENST00000342294 FHAD1B1AJZ9 1412 aa30.79■■■□□ 2.52
TRA2B-202ENST00000342294 TOP2BQ02880 1626 aa30.67■■■□□ 2.5
TRA2B-202ENST00000342294 ERICH3Q5RHP9 1530 aa30.67■■■□□ 2.5
TRA2B-202ENST00000342294 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
TRA2B-202ENST00000342294 PRG4Q92954 1404 aaPredicted RBP30.65■■■□□ 2.5
TRA2B-202ENST00000342294 KIF13AQ9H1H9 1805 aa30.65■■■□□ 2.5
TRA2B-202ENST00000342294 JPH4Q96JJ6 628 aa30.62■■■□□ 2.49
TRA2B-202ENST00000342294 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms