RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
TRAK1-202ENST00000341421 ARID3CA6NKF2 412 aa16.15■□□□□ 0.18
TRAK1-202ENST00000341421 ARHGAP35Q9NRY4 1499 aa16.14■□□□□ 0.17
TRAK1-202ENST00000341421 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
TRAK1-202ENST00000341421 FBLN2P98095 1184 aa16.14■□□□□ 0.17
TRAK1-202ENST00000341421 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
TRAK1-202ENST00000341421 DHX57Q6P158 1386 aaKnown RBP16.14■□□□□ 0.17
TRAK1-202ENST00000341421 TOP2BQ02880 1626 aa16.13■□□□□ 0.17
TRAK1-202ENST00000341421 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
TRAK1-202ENST00000341421 RTL5Q5HYW3 569 aaPredicted RBP16.13■□□□□ 0.17
TRAK1-202ENST00000341421 RAB3GAP2Q9H2M9 1393 aa16.12■□□□□ 0.17
TRAK1-202ENST00000341421 CHIC2Q9UKJ5 165 aa16.12■□□□□ 0.17
TRAK1-202ENST00000341421 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
TRAK1-202ENST00000341421 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
TRAK1-202ENST00000341421 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
TRAK1-202ENST00000341421 PRXQ9BXM0 1461 aa16.08■□□□□ 0.16
TRAK1-202ENST00000341421 SIN3AQ96ST3 1273 aa16.07■□□□□ 0.16
TRAK1-202ENST00000341421 RBM19Q9Y4C8 960 aaKnown RBP16.07■□□□□ 0.16
TRAK1-202ENST00000341421 EIF4G2P78344 907 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRAK1-202ENST00000341421 HNRNPUQ00839 825 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRAK1-202ENST00000341421 ZNF777Q9ULD5 760 aaPredicted RBP16.06■□□□□ 0.16
TRAK1-202ENST00000341421 CFTRP13569 1480 aa16.06■□□□□ 0.16
TRAK1-202ENST00000341421 IGF1RP08069 1367 aa16.05■□□□□ 0.16
TRAK1-202ENST00000341421 RRP7BPQ9NSQ0 103 aa16.05■□□□□ 0.16
TRAK1-202ENST00000341421 UNC13AQ9UPW8 1703 aa16.04■□□□□ 0.16
TRAK1-202ENST00000341421 PDS5BQ9NTI5 1447 aa16.03■□□□□ 0.16
TRAK1-202ENST00000341421 HIRIP3Q9BW71 556 aaPredicted RBP16.01■□□□□ 0.15
TRAK1-202ENST00000341421 FANCD2Q9BXW9 1451 aa16.01■□□□□ 0.15
TRAK1-202ENST00000341421 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
TRAK1-202ENST00000341421 RRBP1Q9P2E9 1410 aaKnown RBP15.99■□□□□ 0.15
TRAK1-202ENST00000341421 CCER2I3L3R5 266 aa15.98■□□□□ 0.15
TRAK1-202ENST00000341421 FHOD3Q2V2M9 1422 aa15.98■□□□□ 0.15
TRAK1-202ENST00000341421 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
TRAK1-202ENST00000341421 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
TRAK1-202ENST00000341421 CHMP7Q8WUX9 453 aaPredicted RBP15.96■□□□□ 0.15
TRAK1-202ENST00000341421 CUX1P39880 1505 aa15.96■□□□□ 0.14
TRAK1-202ENST00000341421 TSPY4P0CV99 314 aa15.94■□□□□ 0.14
TRAK1-202ENST00000341421 TSPY10P0CW01 314 aa15.94■□□□□ 0.14
TRAK1-202ENST00000341421 TDRD9Q8NDG6 1382 aaKnown RBP15.93■□□□□ 0.14
TRAK1-202ENST00000341421 PPP1R15AO75807 674 aaPredicted RBP15.93■□□□□ 0.14
TRAK1-202ENST00000341421 MRS2Q9HD23 443 aa15.92■□□□□ 0.14
TRAK1-202ENST00000341421 FAM9BQ8IZU0 186 aa15.92■□□□□ 0.14
TRAK1-202ENST00000341421 LRRC9Q6ZRR7 1453 aa15.9■□□□□ 0.14
TRAK1-202ENST00000341421 CFDP1Q9UEE9 299 aaPredicted RBP15.89■□□□□ 0.13
TRAK1-202ENST00000341421 BIVM-ERCC5R4GMW8 1640 aa15.87■□□□□ 0.13
TRAK1-202ENST00000341421 PLEKHD1A6NEE1 506 aa15.87■□□□□ 0.13
TRAK1-202ENST00000341421 ANP32AP39687 249 aaKnown RBP15.86■□□□□ 0.13
TRAK1-202ENST00000341421 PRKCSHP14314 528 aaPredicted RBP15.85■□□□□ 0.13
TRAK1-202ENST00000341421 NBR1Q14596 966 aa15.85■□□□□ 0.13
TRAK1-202ENST00000341421 DEKP35659 375 aaKnown RBP15.84■□□□□ 0.13
TRAK1-202ENST00000341421 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.12
TRAK1-202ENST00000341421 PHLDB1Q86UU1 1377 aa15.83■□□□□ 0.12
TRAK1-202ENST00000341421 TMC1Q8TDI8 760 aa15.83■□□□□ 0.12
TRAK1-202ENST00000341421 EFCAB5A4FU69 1503 aa15.81■□□□□ 0.12
TRAK1-202ENST00000341421 FYCO1Q9BQS8 1478 aa15.81■□□□□ 0.12
TRAK1-202ENST00000341421 RAD54L2Q9Y4B4 1467 aa15.8■□□□□ 0.12
TRAK1-202ENST00000341421 TIAM1Q13009 1591 aa15.8■□□□□ 0.12
TRAK1-202ENST00000341421 FGD6Q6ZV73 1430 aa15.79■□□□□ 0.12
TRAK1-202ENST00000341421 CCDC18Q5T9S5 1454 aa15.78■□□□□ 0.12
TRAK1-202ENST00000341421 MAP3K1Q13233 1512 aa15.78■□□□□ 0.12
TRAK1-202ENST00000341421 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
TRAK1-202ENST00000341421 IRX6P78412 446 aaPredicted RBP15.77■□□□□ 0.12
TRAK1-202ENST00000341421 HSPA5P11021 654 aaKnown RBP15.77■□□□□ 0.11
TRAK1-202ENST00000341421 MPHOSPH9Q99550 1183 aa15.76■□□□□ 0.11
TRAK1-202ENST00000341421 FANCIQ9NVI1 1328 aa15.74■□□□□ 0.11
TRAK1-202ENST00000341421 MYOM3Q5VTT5 1437 aa15.74■□□□□ 0.11
TRAK1-202ENST00000341421 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
TRAK1-202ENST00000341421 UACAQ9BZF9 1416 aa15.73■□□□□ 0.11
TRAK1-202ENST00000341421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.73■□□□□ 0.11
TRAK1-202ENST00000341421 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
TRAK1-202ENST00000341421 CARMIL2Q6F5E8 1435 aa15.72■□□□□ 0.11
TRAK1-202ENST00000341421 ZBTB47Q9UFB7 747 aaPredicted RBP15.72■□□□□ 0.11
TRAK1-202ENST00000341421 NOP58Q9Y2X3 529 aaKnown RBP15.71■□□□□ 0.11
TRAK1-202ENST00000341421 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
TRAK1-202ENST00000341421 CCDC136Q96JN2 1154 aa15.71■□□□□ 0.11
TRAK1-202ENST00000341421 KCNH8Q96L42 1107 aa15.71■□□□□ 0.11
TRAK1-202ENST00000341421 TOPBP1Q92547 1522 aa15.71■□□□□ 0.1
TRAK1-202ENST00000341421 PPP4R2Q9NY27 417 aa15.69■□□□□ 0.1
TRAK1-202ENST00000341421 ERICH6BQ5W0A0 696 aa15.69■□□□□ 0.1
TRAK1-202ENST00000341421 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
TRAK1-202ENST00000341421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.69■□□□□ 0.12e-7■■□□□ 13.9
TRAK1-202ENST00000341421 CARD11Q9BXL7 1154 aa15.69■□□□□ 0.1
TRAK1-202ENST00000341421 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
TRAK1-202ENST00000341421 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
TRAK1-202ENST00000341421 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.12e-8■■■■□ 22.9
TRAK1-202ENST00000341421 NCOA2Q15596 1464 aa15.66■□□□□ 0.1
TRAK1-202ENST00000341421 L3MBTL2Q969R5 705 aa15.65■□□□□ 0.1
TRAK1-202ENST00000341421 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
TRAK1-202ENST00000341421 EIF5BO60841 1220 aaKnown RBP15.65■□□□□ 0.1
TRAK1-202ENST00000341421 CUL7Q14999 1698 aa15.61■□□□□ 0.09
TRAK1-202ENST00000341421 PKD2Q13563 968 aa15.61■□□□□ 0.09
TRAK1-202ENST00000341421 FOXD1Q16676 465 aa15.61■□□□□ 0.09
TRAK1-202ENST00000341421 HFM1A2PYH4 1435 aa15.61■□□□□ 0.09
TRAK1-202ENST00000341421 EHBP1L1Q8N3D4 1523 aa15.61■□□□□ 0.09
TRAK1-202ENST00000341421 NPM2Q86SE8 214 aaKnown RBP15.61■□□□□ 0.09
TRAK1-202ENST00000341421 PCF11O94913 1555 aaKnown RBP15.59■□□□□ 0.09
TRAK1-202ENST00000341421 NESP48681 1621 aa15.58■□□□□ 0.08
TRAK1-202ENST00000341421 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRAK1-202ENST00000341421 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.57■□□□□ 0.08
TRAK1-202ENST00000341421 CDCA8Q53HL2 280 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms