RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
DNMT1-201ENST00000340748 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
DNMT1-201ENST00000340748 A0A0G2JS52 829 aa17.61■□□□□ 0.41
DNMT1-201ENST00000340748 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
DNMT1-201ENST00000340748 CFDP1Q9UEE9 299 aaPredicted RBP17.59■□□□□ 0.41
DNMT1-201ENST00000340748 CARMIL2Q6F5E8 1435 aa17.59■□□□□ 0.41
DNMT1-201ENST00000340748 NEFMP07197 916 aa17.59■□□□□ 0.41
DNMT1-201ENST00000340748 ZBTB47Q9UFB7 747 aaPredicted RBP17.57■□□□□ 0.4
DNMT1-201ENST00000340748 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
DNMT1-201ENST00000340748 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
DNMT1-201ENST00000340748 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
DNMT1-201ENST00000340748 EEA1Q15075 1411 aa17.54■□□□□ 0.4
DNMT1-201ENST00000340748 CARMIL1Q5VZK9 1371 aa17.53■□□□□ 0.4
DNMT1-201ENST00000340748 ZBTB7CA1YPR0 619 aa17.52■□□□□ 0.4
DNMT1-201ENST00000340748 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
DNMT1-201ENST00000340748 CLIP1P30622 1438 aa17.49■□□□□ 0.39
DNMT1-201ENST00000340748 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
DNMT1-201ENST00000340748 FANCD2Q9BXW9 1451 aa17.48■□□□□ 0.39
DNMT1-201ENST00000340748 GOLGA3Q08378 1498 aa17.45■□□□□ 0.38
DNMT1-201ENST00000340748 RRP7BPQ9NSQ0 103 aa17.41■□□□□ 0.38
DNMT1-201ENST00000340748 KDM2AQ9Y2K7 1162 aa17.41■□□□□ 0.38
DNMT1-201ENST00000340748 JPH4Q96JJ6 628 aa17.4■□□□□ 0.38
DNMT1-201ENST00000340748 ANP32AP39687 249 aaKnown RBP17.39■□□□□ 0.37
DNMT1-201ENST00000340748 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
DNMT1-201ENST00000340748 GGT6Q6P531 493 aa17.37■□□□□ 0.37
DNMT1-201ENST00000340748 LMOD2Q6P5Q4 547 aa17.37■□□□□ 0.37
DNMT1-201ENST00000340748 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
DNMT1-201ENST00000340748 CC2D2AQ9P2K1 1620 aa17.35■□□□□ 0.37
DNMT1-201ENST00000340748 CCNB3Q8WWL7 1395 aa17.35■□□□□ 0.37
DNMT1-201ENST00000340748 HDGFP51858 240 aaKnown RBP17.35■□□□□ 0.37
DNMT1-201ENST00000340748 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
DNMT1-201ENST00000340748 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
DNMT1-201ENST00000340748 FAM69CQ0P6D2 419 aa17.34■□□□□ 0.37
DNMT1-201ENST00000340748 FKBP8Q14318 412 aa17.33■□□□□ 0.37
DNMT1-201ENST00000340748 ABCC8Q09428 1581 aa17.33■□□□□ 0.36
DNMT1-201ENST00000340748 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
DNMT1-201ENST00000340748 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
DNMT1-201ENST00000340748 WIZO95785 1651 aa17.29■□□□□ 0.36
DNMT1-201ENST00000340748 TNIKQ9UKE5 1360 aa17.29■□□□□ 0.36
DNMT1-201ENST00000340748 KANK1Q14678 1352 aa17.29■□□□□ 0.36
DNMT1-201ENST00000340748 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
DNMT1-201ENST00000340748 FAM9BQ8IZU0 186 aa17.28■□□□□ 0.36
DNMT1-201ENST00000340748 NPM2Q86SE8 214 aaKnown RBP17.25■□□□□ 0.35
DNMT1-201ENST00000340748 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
DNMT1-201ENST00000340748 TMC1Q8TDI8 760 aa17.24■□□□□ 0.35
DNMT1-201ENST00000340748 PTPRGP23470 1445 aa17.22■□□□□ 0.35
DNMT1-201ENST00000340748 POGKQ9P215 609 aa17.21■□□□□ 0.35
DNMT1-201ENST00000340748 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
DNMT1-201ENST00000340748 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
DNMT1-201ENST00000340748 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
DNMT1-201ENST00000340748 MRS2Q9HD23 443 aa17.17■□□□□ 0.34
DNMT1-201ENST00000340748 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
DNMT1-201ENST00000340748 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
DNMT1-201ENST00000340748 WDR43Q15061 677 aaKnown RBP eCLIP17.16■□□□□ 0.34
DNMT1-201ENST00000340748 MIER1Q8N108 512 aa17.15■□□□□ 0.34
DNMT1-201ENST00000340748 NESP48681 1621 aa17.15■□□□□ 0.34
DNMT1-201ENST00000340748 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
DNMT1-201ENST00000340748 AQRO60306 1485 aaKnown RBP eCLIP17.14■□□□□ 0.332e-7■■■■■ 31.8
DNMT1-201ENST00000340748 EID1Q9Y6B2 187 aa17.13■□□□□ 0.33
DNMT1-201ENST00000340748 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
DNMT1-201ENST00000340748 GAPVD1Q14C86 1478 aa17.1■□□□□ 0.33
DNMT1-201ENST00000340748 SALL2Q9Y467 1007 aaPredicted RBP17.08■□□□□ 0.32
DNMT1-201ENST00000340748 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
DNMT1-201ENST00000340748 KIF3BO15066 747 aa17.07■□□□□ 0.32
DNMT1-201ENST00000340748 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
DNMT1-201ENST00000340748 WASHC2CQ9Y4E1 1318 aa17.05■□□□□ 0.32
DNMT1-201ENST00000340748 RAPGEF2Q9Y4G8 1499 aa17.04■□□□□ 0.32
DNMT1-201ENST00000340748 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
DNMT1-201ENST00000340748 HSP90AA1P07900 732 aaKnown RBP17.04■□□□□ 0.32
DNMT1-201ENST00000340748 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
DNMT1-201ENST00000340748 ARXQ96QS3 562 aa17.03■□□□□ 0.32
DNMT1-201ENST00000340748 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.31
DNMT1-201ENST00000340748 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.31
DNMT1-201ENST00000340748 FMN1Q68DA7 1419 aa17.01■□□□□ 0.31
DNMT1-201ENST00000340748 ANP32BQ92688 251 aaKnown RBP17.01■□□□□ 0.31
DNMT1-201ENST00000340748 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
DNMT1-201ENST00000340748 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
DNMT1-201ENST00000340748 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
DNMT1-201ENST00000340748 STK26Q9P289 416 aa16.96■□□□□ 0.31
DNMT1-201ENST00000340748 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
DNMT1-201ENST00000340748 NPHP1O15259 732 aa16.95■□□□□ 0.3
DNMT1-201ENST00000340748 SAFB2Q14151 953 aaKnown RBP eCLIP16.95■□□□□ 0.3
DNMT1-201ENST00000340748 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
DNMT1-201ENST00000340748 FHOD3Q2V2M9 1422 aa16.93■□□□□ 0.3
DNMT1-201ENST00000340748 MEX3CQ5U5Q3 659 aaKnown RBP16.93■□□□□ 0.3
DNMT1-201ENST00000340748 SOX12O15370 315 aa16.91■□□□□ 0.3
DNMT1-201ENST00000340748 PRG4Q92954 1404 aaPredicted RBP16.89■□□□□ 0.3
DNMT1-201ENST00000340748 CARD11Q9BXL7 1154 aa16.89■□□□□ 0.29
DNMT1-201ENST00000340748 MYH16Q9H6N6 1097 aa16.89■□□□□ 0.29
DNMT1-201ENST00000340748 TIMELESSQ9UNS1 1208 aa16.88■□□□□ 0.29
DNMT1-201ENST00000340748 SRPK2P78362 688 aaKnown RBP16.88■□□□□ 0.29
DNMT1-201ENST00000340748 PHF23Q9BUL5 403 aaPredicted RBP16.88■□□□□ 0.29
DNMT1-201ENST00000340748 IRX6P78412 446 aaPredicted RBP16.88■□□□□ 0.29
DNMT1-201ENST00000340748 RSPH4AQ5TD94 716 aa16.88■□□□□ 0.29
DNMT1-201ENST00000340748 CFAP53Q96M91 514 aa16.87■□□□□ 0.29
DNMT1-201ENST00000340748 KNSTRNQ9Y448 316 aa16.87■□□□□ 0.29
DNMT1-201ENST00000340748 VPS8Q8N3P4 1428 aa16.86■□□□□ 0.29
DNMT1-201ENST00000340748 NUTM2DQ5VT03 806 aaPredicted RBP16.86■□□□□ 0.29
DNMT1-201ENST00000340748 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
DNMT1-201ENST00000340748 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms