RNA–Protein interactions for RNA: ENST00000336279.9

HEPH-201, Transcript of hephaestin, humanhuman

TSL 1 (best) BASIC

Gene HEPH, Length 4,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HEPH-201ENST00000336279 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
HEPH-201ENST00000336279 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
HEPH-201ENST00000336279 GRIN2BQ13224 1484 aa11.67□□□□□ -0.54
HEPH-201ENST00000336279 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
HEPH-201ENST00000336279 POLA1P09884 1462 aaPredicted RBP11.66□□□□□ -0.54
HEPH-201ENST00000336279 WDR97A6NE52 1622 aa11.65□□□□□ -0.54
HEPH-201ENST00000336279 IGF1RP08069 1367 aa11.65□□□□□ -0.54
HEPH-201ENST00000336279 CEP162Q5TB80 1403 aa11.63□□□□□ -0.55
HEPH-201ENST00000336279 TARBP1Q13395 1621 aaKnown RBP11.62□□□□□ -0.55
HEPH-201ENST00000336279 FHAD1B1AJZ9 1412 aa11.62□□□□□ -0.55
HEPH-201ENST00000336279 CYB5RLQ6IPT4 315 aa11.61□□□□□ -0.55
HEPH-201ENST00000336279 ESF1Q9H501 851 aaKnown RBP11.61□□□□□ -0.55
HEPH-201ENST00000336279 ABCA10Q8WWZ4 1543 aa11.61□□□□□ -0.55
HEPH-201ENST00000336279 TRIM52Q96A61 297 aa11.6□□□□□ -0.55
HEPH-201ENST00000336279 TSPY4P0CV99 314 aa11.59□□□□□ -0.55
HEPH-201ENST00000336279 TSPY10P0CW01 314 aa11.59□□□□□ -0.55
HEPH-201ENST00000336279 RUSC2Q8N2Y8 1516 aa11.57□□□□□ -0.56
HEPH-201ENST00000336279 ABCA5Q8WWZ7 1642 aa11.56□□□□□ -0.56
HEPH-201ENST00000336279 PTPRGP23470 1445 aa11.55□□□□□ -0.56
HEPH-201ENST00000336279 FMN1Q68DA7 1419 aa11.53□□□□□ -0.56
HEPH-201ENST00000336279 CFDP1Q9UEE9 299 aaPredicted RBP11.53□□□□□ -0.56
HEPH-201ENST00000336279 SNAPC4Q5SXM2 1469 aa11.52□□□□□ -0.56
HEPH-201ENST00000336279 KIF21BO75037 1637 aa11.52□□□□□ -0.56
HEPH-201ENST00000336279 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.56
HEPH-201ENST00000336279 ERICH3Q5RHP9 1530 aa11.49□□□□□ -0.57
HEPH-201ENST00000336279 PBRM1Q86U86 1689 aa11.49□□□□□ -0.57
HEPH-201ENST00000336279 PRXQ9BXM0 1461 aa11.48□□□□□ -0.57
HEPH-201ENST00000336279 CUL7Q14999 1698 aa11.48□□□□□ -0.57
HEPH-201ENST00000336279 MAGI1Q96QZ7 1491 aaPredicted RBP11.46□□□□□ -0.57
HEPH-201ENST00000336279 ZNF608Q9ULD9 1512 aaPredicted RBP11.46□□□□□ -0.57
HEPH-201ENST00000336279 FHOD3Q2V2M9 1422 aa11.46□□□□□ -0.58
HEPH-201ENST00000336279 CHIC2Q9UKJ5 165 aa11.46□□□□□ -0.58
HEPH-201ENST00000336279 EIF4G3O43432 1585 aaKnown RBP11.46□□□□□ -0.58
HEPH-201ENST00000336279 CCNB3Q8WWL7 1395 aa11.45□□□□□ -0.58
HEPH-201ENST00000336279 SYNJ2O15056 1496 aa11.45□□□□□ -0.58
HEPH-201ENST00000336279 PRG4Q92954 1404 aaPredicted RBP11.44□□□□□ -0.58
HEPH-201ENST00000336279 ARID4BQ4LE39 1312 aaPredicted RBP11.43□□□□□ -0.58
HEPH-201ENST00000336279 EFCAB2Q5VUJ9 269 aa11.42□□□□□ -0.58
HEPH-201ENST00000336279 VPS8Q8N3P4 1428 aa11.42□□□□□ -0.58
HEPH-201ENST00000336279 PLPPR3Q6T4P5 718 aa11.42□□□□□ -0.58
HEPH-201ENST00000336279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.586e-8■■□□□ 12.5
HEPH-201ENST00000336279 ADAMTS12P58397 1594 aa11.4□□□□□ -0.59
HEPH-201ENST00000336279 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
HEPH-201ENST00000336279 KIAA0586Q9BVV6 1533 aa11.39□□□□□ -0.59
HEPH-201ENST00000336279 BCANQ96GW7 911 aa11.37□□□□□ -0.59
HEPH-201ENST00000336279 GRIN2AQ12879 1464 aa11.37□□□□□ -0.59
HEPH-201ENST00000336279 FAM69CQ0P6D2 419 aa11.36□□□□□ -0.59
HEPH-201ENST00000336279 NEUROD1Q13562 356 aa11.34□□□□□ -0.59
HEPH-201ENST00000336279 ACIN1Q9UKV3 1341 aaKnown RBP11.34□□□□□ -0.59
HEPH-201ENST00000336279 RRP7BPQ9NSQ0 103 aa11.33□□□□□ -0.59
HEPH-201ENST00000336279 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
HEPH-201ENST00000336279 CTTNBP2Q8WZ74 1663 aa11.33□□□□□ -0.6
HEPH-201ENST00000336279 CCDC18Q5T9S5 1454 aa11.32□□□□□ -0.6
HEPH-201ENST00000336279 RSPH4AQ5TD94 716 aa11.3□□□□□ -0.6
HEPH-201ENST00000336279 KANK4Q5T7N3 995 aaPredicted RBP11.29□□□□□ -0.6
HEPH-201ENST00000336279 ZNF326Q5BKZ1 582 aaKnown RBP11.29□□□□□ -0.6
HEPH-201ENST00000336279 ARHGAP35Q9NRY4 1499 aa11.28□□□□□ -0.6
HEPH-201ENST00000336279 POLR3GLQ9BT43 218 aa11.27□□□□□ -0.61
HEPH-201ENST00000336279 IQGAP2Q13576 1575 aa11.26□□□□□ -0.61
HEPH-201ENST00000336279 MLECQ14165 292 aa11.26□□□□□ -0.61
HEPH-201ENST00000336279 SLC4A1APQ9BWU0 796 aaKnown RBP11.25□□□□□ -0.61
HEPH-201ENST00000336279 CHD1O14646 1710 aa11.25□□□□□ -0.61
HEPH-201ENST00000336279 EFCAB5A4FU69 1503 aa11.25□□□□□ -0.61
HEPH-201ENST00000336279 UACAQ9BZF9 1416 aa11.25□□□□□ -0.61
HEPH-201ENST00000336279 SPAG9O60271 1321 aaKnown RBP11.24□□□□□ -0.61
HEPH-201ENST00000336279 HRCP23327 699 aa11.24□□□□□ -0.61
HEPH-201ENST00000336279 NUP160Q12769 1436 aa11.23□□□□□ -0.61
HEPH-201ENST00000336279 HNRNPMP52272 730 aaKnown RBP eCLIP11.23□□□□□ -0.617e-7■■■■■ 35.2
HEPH-201ENST00000336279 CEP170Q5SW79 1584 aa11.23□□□□□ -0.61
HEPH-201ENST00000336279 GGT6Q6P531 493 aa11.22□□□□□ -0.61
HEPH-201ENST00000336279 CASKIN1Q8WXD9 1431 aa11.21□□□□□ -0.61
HEPH-201ENST00000336279 KANK1Q14678 1352 aa11.21□□□□□ -0.61
HEPH-201ENST00000336279 SAMD9Q5K651 1589 aa11.2□□□□□ -0.62
HEPH-201ENST00000336279 UGGT2Q9NYU1 1516 aa11.19□□□□□ -0.62
HEPH-201ENST00000336279 ANKRD30AQ9BXX3 1397 aa11.18□□□□□ -0.62
HEPH-201ENST00000336279 PPP1R15AO75807 674 aaPredicted RBP11.17□□□□□ -0.62
HEPH-201ENST00000336279 KIF3BO15066 747 aa11.16□□□□□ -0.62
HEPH-201ENST00000336279 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
HEPH-201ENST00000336279 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
HEPH-201ENST00000336279 SHROOM2Q13796 1616 aa11.15□□□□□ -0.62
HEPH-201ENST00000336279 FYCO1Q9BQS8 1478 aa11.15□□□□□ -0.62
HEPH-201ENST00000336279 CLASP1Q7Z460 1538 aa11.14□□□□□ -0.63
HEPH-201ENST00000336279 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
HEPH-201ENST00000336279 TROQ12816 1431 aaPredicted RBP11.12□□□□□ -0.63
HEPH-201ENST00000336279 HDGFP51858 240 aaKnown RBP11.11□□□□□ -0.63
HEPH-201ENST00000336279 KIAA0556O60303 1618 aa11.11□□□□□ -0.63
HEPH-201ENST00000336279 DISP1Q96F81 1524 aa11.11□□□□□ -0.63
HEPH-201ENST00000336279 KDM2AQ9Y2K7 1162 aa11.1□□□□□ -0.63
HEPH-201ENST00000336279 WASHC2CQ9Y4E1 1318 aa11.1□□□□□ -0.63
HEPH-201ENST00000336279 RGL3Q3MIN7 710 aa11.09□□□□□ -0.63
HEPH-201ENST00000336279 HECW1Q76N89 1606 aa11.09□□□□□ -0.63
HEPH-201ENST00000336279 MYOM3Q5VTT5 1437 aa11.08□□□□□ -0.64
HEPH-201ENST00000336279 LRRC9Q6ZRR7 1453 aa11.07□□□□□ -0.64
HEPH-201ENST00000336279 CD109Q6YHK3 1445 aa11.07□□□□□ -0.64
HEPH-201ENST00000336279 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
HEPH-201ENST00000336279 EPRSP07814 1512 aaKnown RBP11.07□□□□□ -0.64
HEPH-201ENST00000336279 ARHGAP5Q13017 1502 aa11.07□□□□□ -0.64
HEPH-201ENST00000336279 NUP155O75694 1391 aa11.06□□□□□ -0.64
HEPH-201ENST00000336279 ZNF644Q9H582 1327 aaPredicted RBP11.05□□□□□ -0.64
HEPH-201ENST00000336279 NCOA2Q15596 1464 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms