RNA–Protein interactions for RNA: ENST00000336083.7

RAB6A-202, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB6A, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-202ENST00000336083 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
RAB6A-202ENST00000336083 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
RAB6A-202ENST00000336083 CDK11AQ9UQ88 783 aaPredicted RBP17.41■□□□□ 0.38
RAB6A-202ENST00000336083 SETD5Q9C0A6 1442 aa17.41■□□□□ 0.38
RAB6A-202ENST00000336083 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
RAB6A-202ENST00000336083 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
RAB6A-202ENST00000336083 HNRNPUQ00839 825 aaKnown RBP eCLIP17.39■□□□□ 0.37
RAB6A-202ENST00000336083 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
RAB6A-202ENST00000336083 ATP1B4Q9UN42 357 aaPredicted RBP17.38■□□□□ 0.37
RAB6A-202ENST00000336083 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
RAB6A-202ENST00000336083 FANCIQ9NVI1 1328 aa17.34■□□□□ 0.37
RAB6A-202ENST00000336083 KIF27Q86VH2 1401 aa17.31■□□□□ 0.36
RAB6A-202ENST00000336083 PHLDB1Q86UU1 1377 aa17.3■□□□□ 0.36
RAB6A-202ENST00000336083 P3H3Q8IVL6 736 aa17.29■□□□□ 0.36
RAB6A-202ENST00000336083 TONSLQ96HA7 1378 aa17.26■□□□□ 0.35
RAB6A-202ENST00000336083 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
RAB6A-202ENST00000336083 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
RAB6A-202ENST00000336083 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
RAB6A-202ENST00000336083 DEKP35659 375 aaKnown RBP17.23■□□□□ 0.35
RAB6A-202ENST00000336083 TIAM1Q13009 1591 aa17.22■□□□□ 0.35
RAB6A-202ENST00000336083 B4GALNT3Q6L9W6 998 aa17.21■□□□□ 0.35
RAB6A-202ENST00000336083 LRRC9Q6ZRR7 1453 aa17.2■□□□□ 0.34
RAB6A-202ENST00000336083 NBR1Q14596 966 aa17.19■□□□□ 0.34
RAB6A-202ENST00000336083 CUX1P39880 1505 aa17.19■□□□□ 0.34
RAB6A-202ENST00000336083 PPP4R2Q9NY27 417 aa17.18■□□□□ 0.34
RAB6A-202ENST00000336083 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
RAB6A-202ENST00000336083 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
RAB6A-202ENST00000336083 MYT1LQ9UL68 1186 aa17.1■□□□□ 0.33
RAB6A-202ENST00000336083 NOP58Q9Y2X3 529 aaKnown RBP17.08■□□□□ 0.33
RAB6A-202ENST00000336083 IGF1RP08069 1367 aa17.08■□□□□ 0.33
RAB6A-202ENST00000336083 WASHC2AQ641Q2 1341 aa17.08■□□□□ 0.32
RAB6A-202ENST00000336083 MAP3K1Q13233 1512 aa17.08■□□□□ 0.32
RAB6A-202ENST00000336083 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
RAB6A-202ENST00000336083 HSPA5P11021 654 aaKnown RBP17.07■□□□□ 0.32
RAB6A-202ENST00000336083 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
RAB6A-202ENST00000336083 ERICH6BQ5W0A0 696 aa17.06■□□□□ 0.32
RAB6A-202ENST00000336083 CNGB1Q14028 1251 aaPredicted RBP17.05■□□□□ 0.32
RAB6A-202ENST00000336083 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
RAB6A-202ENST00000336083 PRKCSHP14314 528 aaPredicted RBP17.04■□□□□ 0.32
RAB6A-202ENST00000336083 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
RAB6A-202ENST00000336083 HMGXB3Q12766 1538 aa17.04■□□□□ 0.32
RAB6A-202ENST00000336083 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
RAB6A-202ENST00000336083 NCAPD3P42695 1498 aa17.03■□□□□ 0.32
RAB6A-202ENST00000336083 FHOD3Q2V2M9 1422 aa17.02■□□□□ 0.32
RAB6A-202ENST00000336083 PCF11O94913 1555 aaKnown RBP17.01■□□□□ 0.31
RAB6A-202ENST00000336083 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
RAB6A-202ENST00000336083 EIF4G2P78344 907 aaKnown RBP eCLIP16.98■□□□□ 0.31
RAB6A-202ENST00000336083 UACAQ9BZF9 1416 aa16.97■□□□□ 0.31
RAB6A-202ENST00000336083 PRKRIP1Q9H875 184 aaPredicted RBP16.96■□□□□ 0.31
RAB6A-202ENST00000336083 PTPRKQ15262 1439 aa16.96■□□□□ 0.31
RAB6A-202ENST00000336083 RTL5Q5HYW3 569 aaPredicted RBP16.95■□□□□ 0.3
RAB6A-202ENST00000336083 FGD6Q6ZV73 1430 aa16.95■□□□□ 0.3
RAB6A-202ENST00000336083 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
RAB6A-202ENST00000336083 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
RAB6A-202ENST00000336083 C11orf95C9JLR9 678 aaPredicted RBP16.94■□□□□ 0.3
RAB6A-202ENST00000336083 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.3
RAB6A-202ENST00000336083 ANP32AP39687 249 aaKnown RBP16.94■□□□□ 0.3
RAB6A-202ENST00000336083 ZBED9Q6R2W3 1325 aa16.94■□□□□ 0.3
RAB6A-202ENST00000336083 CFAP43Q8NDM7 1665 aa16.94■□□□□ 0.3
RAB6A-202ENST00000336083 ANO8Q9HCE9 1232 aaPredicted RBP16.93■□□□□ 0.3
RAB6A-202ENST00000336083 MTUS2Q5JR59 1369 aa16.92■□□□□ 0.3
RAB6A-202ENST00000336083 CCDC136Q96JN2 1154 aa16.92■□□□□ 0.3
RAB6A-202ENST00000336083 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
RAB6A-202ENST00000336083 CFTRP13569 1480 aa16.91■□□□□ 0.3
RAB6A-202ENST00000336083 HFM1A2PYH4 1435 aa16.91■□□□□ 0.3
RAB6A-202ENST00000336083 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
RAB6A-202ENST00000336083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.9■□□□□ 0.33e-11■■■□□ 17
RAB6A-202ENST00000336083 AKNAQ7Z591 1439 aa16.89■□□□□ 0.29
RAB6A-202ENST00000336083 FOXD1Q16676 465 aa16.88■□□□□ 0.29
RAB6A-202ENST00000336083 NAIPQ13075 1403 aa16.88■□□□□ 0.29
RAB6A-202ENST00000336083 IPO9Q96P70 1041 aaKnown RBP16.88■□□□□ 0.29
RAB6A-202ENST00000336083 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
RAB6A-202ENST00000336083 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
RAB6A-202ENST00000336083 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
RAB6A-202ENST00000336083 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
RAB6A-202ENST00000336083 PTPN23Q9H3S7 1636 aa16.87■□□□□ 0.29
RAB6A-202ENST00000336083 NPM2Q86SE8 214 aaKnown RBP16.86■□□□□ 0.29
RAB6A-202ENST00000336083 L3MBTL2Q969R5 705 aa16.86■□□□□ 0.29
RAB6A-202ENST00000336083 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
RAB6A-202ENST00000336083 CCDC7Q96M83 1385 aa16.85■□□□□ 0.29
RAB6A-202ENST00000336083 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
RAB6A-202ENST00000336083 FGD5Q6ZNL6 1462 aa16.85■□□□□ 0.29
RAB6A-202ENST00000336083 FMN1Q68DA7 1419 aa16.85■□□□□ 0.29
RAB6A-202ENST00000336083 IL27Q8NEV9 243 aa16.83■□□□□ 0.29
RAB6A-202ENST00000336083 SALL2Q9Y467 1007 aaPredicted RBP16.83■□□□□ 0.28
RAB6A-202ENST00000336083 NCOA2Q15596 1464 aa16.82■□□□□ 0.28
RAB6A-202ENST00000336083 NUDCQ9Y266 331 aa16.78■□□□□ 0.28
RAB6A-202ENST00000336083 LAS1LQ9Y4W2 734 aaKnown RBP16.78■□□□□ 0.28
RAB6A-202ENST00000336083 KIF7Q2M1P5 1343 aa16.78■□□□□ 0.28
RAB6A-202ENST00000336083 NCOA1Q15788 1441 aa16.78■□□□□ 0.28
RAB6A-202ENST00000336083 NBPF8Q3BBV2 869 aa16.77■□□□□ 0.28
RAB6A-202ENST00000336083 MPHOSPH9Q99550 1183 aa16.77■□□□□ 0.28
RAB6A-202ENST00000336083 MYOM3Q5VTT5 1437 aa16.76■□□□□ 0.27
RAB6A-202ENST00000336083 SMG6Q86US8 1419 aaKnown RBP16.74■□□□□ 0.27
RAB6A-202ENST00000336083 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
RAB6A-202ENST00000336083 NEFMP07197 916 aa16.72■□□□□ 0.27
RAB6A-202ENST00000336083 DENND4BO75064 1496 aaPredicted RBP16.72■□□□□ 0.27
RAB6A-202ENST00000336083 ARID3CA6NKF2 412 aa16.71■□□□□ 0.27
RAB6A-202ENST00000336083 ZNF326Q5BKZ1 582 aaKnown RBP16.71■□□□□ 0.27
RAB6A-202ENST00000336083 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms