RNA–Protein interactions for RNA: ENST00000336083.7

RAB6A-202, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB6A, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-202ENST00000336083 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
RAB6A-202ENST00000336083 SHROOM4Q9ULL8 1493 aa21.17■□□□□ 0.98
RAB6A-202ENST00000336083 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
RAB6A-202ENST00000336083 HRCP23327 699 aa20.92■□□□□ 0.94
RAB6A-202ENST00000336083 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
RAB6A-202ENST00000336083 PPARGC1BQ86YN6 1023 aaKnown RBP20.64■□□□□ 0.89
RAB6A-202ENST00000336083 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.89
RAB6A-202ENST00000336083 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.87
RAB6A-202ENST00000336083 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
RAB6A-202ENST00000336083 DCAF8L2P0C7V8 631 aa20.13■□□□□ 0.81
RAB6A-202ENST00000336083 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
RAB6A-202ENST00000336083 DCAF1Q9Y4B6 1507 aa20.01■□□□□ 0.79
RAB6A-202ENST00000336083 TRIM26Q12899 539 aaPredicted RBP19.95■□□□□ 0.78
RAB6A-202ENST00000336083 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
RAB6A-202ENST00000336083 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
RAB6A-202ENST00000336083 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
RAB6A-202ENST00000336083 ZEB1P37275 1124 aaPredicted RBP19.69■□□□□ 0.74
RAB6A-202ENST00000336083 EHMT2Q96KQ7 1210 aa19.54■□□□□ 0.72
RAB6A-202ENST00000336083 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
RAB6A-202ENST00000336083 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
RAB6A-202ENST00000336083 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
RAB6A-202ENST00000336083 ACIN1Q9UKV3 1341 aaKnown RBP19.3■□□□□ 0.68
RAB6A-202ENST00000336083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
RAB6A-202ENST00000336083 GTF3C3Q9Y5Q9 886 aa19.2■□□□□ 0.66
RAB6A-202ENST00000336083 CCER1Q8TC90 406 aaPredicted RBP19.19■□□□□ 0.66
RAB6A-202ENST00000336083 CENPBP07199 599 aaPredicted RBP19.1■□□□□ 0.65
RAB6A-202ENST00000336083 DIEXFQ68CQ4 756 aaKnown RBP19.09■□□□□ 0.65
RAB6A-202ENST00000336083 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.64
RAB6A-202ENST00000336083 ABCC9O60706 1549 aa19.07■□□□□ 0.64
RAB6A-202ENST00000336083 TTBK1Q5TCY1 1321 aaPredicted RBP19.03■□□□□ 0.64
RAB6A-202ENST00000336083 MYT1Q01538 1121 aa19.01■□□□□ 0.63
RAB6A-202ENST00000336083 RB1CC1Q8TDY2 1594 aa18.99■□□□□ 0.63
RAB6A-202ENST00000336083 YTHDC1Q96MU7 727 aaKnown RBP18.91■□□□□ 0.62
RAB6A-202ENST00000336083 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
RAB6A-202ENST00000336083 ZNF316A6NFI3 1004 aaPredicted RBP18.72■□□□□ 0.59
RAB6A-202ENST00000336083 MIER1Q8N108 512 aa18.63■□□□□ 0.57
RAB6A-202ENST00000336083 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
RAB6A-202ENST00000336083 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
RAB6A-202ENST00000336083 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
RAB6A-202ENST00000336083 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
RAB6A-202ENST00000336083 UBTFP17480 764 aaKnown RBP18.48■□□□□ 0.55
RAB6A-202ENST00000336083 WIZO95785 1651 aa18.48■□□□□ 0.55
RAB6A-202ENST00000336083 WRNQ14191 1432 aaPredicted RBP eCLIP18.47■□□□□ 0.55
RAB6A-202ENST00000336083 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
RAB6A-202ENST00000336083 NACADO15069 1562 aa18.4■□□□□ 0.54
RAB6A-202ENST00000336083 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
RAB6A-202ENST00000336083 SOGA1O94964 1423 aa18.37■□□□□ 0.53
RAB6A-202ENST00000336083 TNIKQ9UKE5 1360 aa18.34■□□□□ 0.53
RAB6A-202ENST00000336083 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
RAB6A-202ENST00000336083 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
RAB6A-202ENST00000336083 RUSC2Q8N2Y8 1516 aa18.26■□□□□ 0.51
RAB6A-202ENST00000336083 SUPT16HQ9Y5B9 1047 aaKnown RBP18.26■□□□□ 0.51
RAB6A-202ENST00000336083 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
RAB6A-202ENST00000336083 RANGAP1P46060 587 aaPredicted RBP18.22■□□□□ 0.51
RAB6A-202ENST00000336083 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
RAB6A-202ENST00000336083 APLP2Q06481 763 aa18.17■□□□□ 0.5
RAB6A-202ENST00000336083 GOLGA3Q08378 1498 aa18.14■□□□□ 0.49
RAB6A-202ENST00000336083 TSHZ2Q9NRE2 1034 aa18.13■□□□□ 0.49
RAB6A-202ENST00000336083 EEA1Q15075 1411 aa18.1■□□□□ 0.49
RAB6A-202ENST00000336083 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
RAB6A-202ENST00000336083 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.49
RAB6A-202ENST00000336083 CLSPNQ9HAW4 1339 aa18.07■□□□□ 0.48
RAB6A-202ENST00000336083 BCANQ96GW7 911 aa18.06■□□□□ 0.48
RAB6A-202ENST00000336083 TOP2AP11388 1531 aaKnown RBP18.05■□□□□ 0.48
RAB6A-202ENST00000336083 CLIP1P30622 1438 aa18.05■□□□□ 0.48
RAB6A-202ENST00000336083 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
RAB6A-202ENST00000336083 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
RAB6A-202ENST00000336083 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
RAB6A-202ENST00000336083 KCNH8Q96L42 1107 aa17.97■□□□□ 0.47
RAB6A-202ENST00000336083 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
RAB6A-202ENST00000336083 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
RAB6A-202ENST00000336083 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
RAB6A-202ENST00000336083 FKBP8Q14318 412 aa17.88■□□□□ 0.45
RAB6A-202ENST00000336083 ITGAEP38570 1179 aa17.86■□□□□ 0.45
RAB6A-202ENST00000336083 RAPGEF2Q9Y4G8 1499 aa17.84■□□□□ 0.45
RAB6A-202ENST00000336083 KANK4Q5T7N3 995 aaPredicted RBP17.81■□□□□ 0.44
RAB6A-202ENST00000336083 KIF21BO75037 1637 aa17.8■□□□□ 0.44
RAB6A-202ENST00000336083 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
RAB6A-202ENST00000336083 DDX10Q13206 875 aaKnown RBP17.75■□□□□ 0.43
RAB6A-202ENST00000336083 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
RAB6A-202ENST00000336083 RBM19Q9Y4C8 960 aaKnown RBP17.74■□□□□ 0.43
RAB6A-202ENST00000336083 NEFLP07196 543 aa17.73■□□□□ 0.43
RAB6A-202ENST00000336083 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
RAB6A-202ENST00000336083 TRIM52Q96A61 297 aa17.7■□□□□ 0.42
RAB6A-202ENST00000336083 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
RAB6A-202ENST00000336083 CCNB3Q8WWL7 1395 aa17.61■□□□□ 0.41
RAB6A-202ENST00000336083 ARAP1Q96P48 1450 aa17.6■□□□□ 0.41
RAB6A-202ENST00000336083 SIN3AQ96ST3 1273 aa17.6■□□□□ 0.41
RAB6A-202ENST00000336083 RRBP1Q9P2E9 1410 aaKnown RBP17.58■□□□□ 0.4
RAB6A-202ENST00000336083 RAB3GAP2Q9H2M9 1393 aa17.57■□□□□ 0.4
RAB6A-202ENST00000336083 MSH5O43196 834 aa17.55■□□□□ 0.4
RAB6A-202ENST00000336083 ANP32CO43423 234 aa17.52■□□□□ 0.4
RAB6A-202ENST00000336083 IRX6P78412 446 aaPredicted RBP17.51■□□□□ 0.39
RAB6A-202ENST00000336083 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
RAB6A-202ENST00000336083 PEG3Q9GZU2 1588 aa17.5■□□□□ 0.39
RAB6A-202ENST00000336083 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
RAB6A-202ENST00000336083 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
RAB6A-202ENST00000336083 MAPKBP1O60336 1514 aa17.49■□□□□ 0.39
RAB6A-202ENST00000336083 CUX2O14529 1486 aa17.48■□□□□ 0.39
RAB6A-202ENST00000336083 FAM50AQ14320 339 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms