RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 PRG4Q92954 1404 aaPredicted RBP25.43■■□□□ 1.66
KATNA1-201ENST00000335643 JPH4Q96JJ6 628 aa25.43■■□□□ 1.66
KATNA1-201ENST00000335643 KIAA0586Q9BVV6 1533 aa25.42■■□□□ 1.66
KATNA1-201ENST00000335643 RAPGEF2Q9Y4G8 1499 aa25.36■■□□□ 1.65
KATNA1-201ENST00000335643 IQGAP2Q13576 1575 aa25.29■■□□□ 1.64
KATNA1-201ENST00000335643 PRXQ9BXM0 1461 aa25.26■■□□□ 1.63
KATNA1-201ENST00000335643 CTTNBP2Q8WZ74 1663 aa25.2■■□□□ 1.62
KATNA1-201ENST00000335643 CHIC1Q5VXU3 224 aa25.18■■□□□ 1.62
KATNA1-201ENST00000335643 TRHP20396 242 aaPredicted RBP25.17■■□□□ 1.62
KATNA1-201ENST00000335643 DISP1Q96F81 1524 aa25.16■■□□□ 1.62
KATNA1-201ENST00000335643 ADCY10Q96PN6 1610 aa25.14■■□□□ 1.62
KATNA1-201ENST00000335643 UGGT2Q9NYU1 1516 aa25.14■■□□□ 1.61
KATNA1-201ENST00000335643 CSRNP3Q8WYN3 585 aa25.14■■□□□ 1.61
KATNA1-201ENST00000335643 CARMIL2Q6F5E8 1435 aa25.1■■□□□ 1.61
KATNA1-201ENST00000335643 EEA1Q15075 1411 aa25.09■■□□□ 1.61
KATNA1-201ENST00000335643 FAM9AQ8IZU1 332 aaPredicted RBP25.08■■□□□ 1.61
KATNA1-201ENST00000335643 KIAA0556O60303 1618 aa25.08■■□□□ 1.6
KATNA1-201ENST00000335643 TTBK1Q5TCY1 1321 aaPredicted RBP25.08■■□□□ 1.6
KATNA1-201ENST00000335643 TNIKQ9UKE5 1360 aa25.07■■□□□ 1.6
KATNA1-201ENST00000335643 PTPRGP23470 1445 aa25.07■■□□□ 1.6
KATNA1-201ENST00000335643 KIF13AQ9H1H9 1805 aa24.98■■□□□ 1.59
KATNA1-201ENST00000335643 MAPKBP1O60336 1514 aa24.95■■□□□ 1.59
KATNA1-201ENST00000335643 KIF21BO75037 1637 aa24.95■■□□□ 1.58
KATNA1-201ENST00000335643 UACAQ9BZF9 1416 aa24.92■■□□□ 1.58
KATNA1-201ENST00000335643 GOLGA3Q08378 1498 aa24.91■■□□□ 1.58
KATNA1-201ENST00000335643 UHRF1BP1LA0JNW5 1464 aa24.9■■□□□ 1.58
KATNA1-201ENST00000335643 ABCC2Q92887 1545 aa24.9■■□□□ 1.58
KATNA1-201ENST00000335643 NPM1P06748 294 aaKnown RBP eCLIP24.89■■□□□ 1.58
KATNA1-201ENST00000335643 SAMD9Q5K651 1589 aa24.86■■□□□ 1.57
KATNA1-201ENST00000335643 DIP2BQ9P265 1576 aa24.86■■□□□ 1.57
KATNA1-201ENST00000335643 ABCC10Q5T3U5 1492 aa24.86■■□□□ 1.57
KATNA1-201ENST00000335643 PLB1Q6P1J6 1458 aa24.86■■□□□ 1.57
KATNA1-201ENST00000335643 KDM5BQ9UGL1 1544 aa24.81■■□□□ 1.56
KATNA1-201ENST00000335643 P3H3Q8IVL6 736 aa24.81■■□□□ 1.56
KATNA1-201ENST00000335643 EHMT2Q96KQ7 1210 aa24.81■■□□□ 1.56
KATNA1-201ENST00000335643 ABCA8O94911 1581 aa24.81■■□□□ 1.56
KATNA1-201ENST00000335643 ZCCHC11Q5TAX3 1644 aaKnown RBP24.81■■□□□ 1.56
KATNA1-201ENST00000335643 FAM69CQ0P6D2 419 aa24.78■■□□□ 1.56
KATNA1-201ENST00000335643 RANGAP1P46060 587 aaPredicted RBP24.77■■□□□ 1.56
KATNA1-201ENST00000335643 ASXL2Q76L83 1435 aa24.77■■□□□ 1.56
KATNA1-201ENST00000335643 FHOD3Q2V2M9 1422 aa24.7■■□□□ 1.54
KATNA1-201ENST00000335643 TSPOAP1O95153 1857 aa24.68■■□□□ 1.54
KATNA1-201ENST00000335643 UBTFP17480 764 aaKnown RBP24.66■■□□□ 1.54
KATNA1-201ENST00000335643 EFCAB5A4FU69 1503 aa24.65■■□□□ 1.54
KATNA1-201ENST00000335643 GLI2P10070 1586 aa24.64■■□□□ 1.54
KATNA1-201ENST00000335643 RAPGEF6Q8TEU7 1601 aa24.64■■□□□ 1.53
KATNA1-201ENST00000335643 EPRSP07814 1512 aaKnown RBP24.64■■□□□ 1.53
KATNA1-201ENST00000335643 PPRC1Q5VV67 1664 aaKnown RBP24.62■■□□□ 1.53
KATNA1-201ENST00000335643 WDR7Q9Y4E6 1490 aa24.61■■□□□ 1.53
KATNA1-201ENST00000335643 ARID3CA6NKF2 412 aa24.61■■□□□ 1.53
KATNA1-201ENST00000335643 ATP10BO94823 1461 aa24.58■■□□□ 1.53
KATNA1-201ENST00000335643 MAP3K4Q9Y6R4 1608 aa24.57■■□□□ 1.52
KATNA1-201ENST00000335643 NUP153P49790 1475 aaKnown RBP24.56■■□□□ 1.52
KATNA1-201ENST00000335643 ARHGAP35Q9NRY4 1499 aa24.56■■□□□ 1.52
KATNA1-201ENST00000335643 KDM6BO15054 1643 aa24.48■■□□□ 1.51
KATNA1-201ENST00000335643 KCNH8Q96L42 1107 aa24.47■■□□□ 1.51
KATNA1-201ENST00000335643 CFAP43Q8NDM7 1665 aa24.44■■□□□ 1.5
KATNA1-201ENST00000335643 CDK13Q14004 1512 aaKnown RBP24.39■■□□□ 1.5
KATNA1-201ENST00000335643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.39■■□□□ 1.5
KATNA1-201ENST00000335643 HNRNPUL2Q1KMD3 747 aaKnown RBP24.39■■□□□ 1.5
KATNA1-201ENST00000335643 FMN1Q68DA7 1419 aa24.38■■□□□ 1.49
KATNA1-201ENST00000335643 CD109Q6YHK3 1445 aa24.38■■□□□ 1.49
KATNA1-201ENST00000335643 COL17A1Q9UMD9 1497 aaPredicted RBP24.38■■□□□ 1.49
KATNA1-201ENST00000335643 ABCA9Q8IUA7 1624 aa24.36■■□□□ 1.49
KATNA1-201ENST00000335643 TEX14Q8IWB6 1497 aa24.36■■□□□ 1.49
KATNA1-201ENST00000335643 LRRIQ1Q96JM4 1722 aa24.36■■□□□ 1.49
KATNA1-201ENST00000335643 MAGI3Q5TCQ9 1506 aa24.35■■□□□ 1.49
KATNA1-201ENST00000335643 HECW1Q76N89 1606 aa24.35■■□□□ 1.49
KATNA1-201ENST00000335643 CLIP1P30622 1438 aa24.3■■□□□ 1.48
KATNA1-201ENST00000335643 PCF11O94913 1555 aaKnown RBP24.3■■□□□ 1.48
KATNA1-201ENST00000335643 ATP1B4Q9UN42 357 aaPredicted RBP24.28■■□□□ 1.48
KATNA1-201ENST00000335643 PLEKHD1A6NEE1 506 aa24.26■■□□□ 1.47
KATNA1-201ENST00000335643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.24■■□□□ 1.47
KATNA1-201ENST00000335643 TTC37Q6PGP7 1564 aa24.24■■□□□ 1.47
KATNA1-201ENST00000335643 CASKIN1Q8WXD9 1431 aa24.21■■□□□ 1.47
KATNA1-201ENST00000335643 LOC105371045A0A1W2PR82 267 aa24.19■■□□□ 1.46
KATNA1-201ENST00000335643 CEP162Q5TB80 1403 aa24.18■■□□□ 1.46
KATNA1-201ENST00000335643 KIF14Q15058 1648 aa24.17■■□□□ 1.46
KATNA1-201ENST00000335643 FYCO1Q9BQS8 1478 aa24.16■■□□□ 1.46
KATNA1-201ENST00000335643 ARAP3Q8WWN8 1544 aa24.15■■□□□ 1.46
KATNA1-201ENST00000335643 NEO1Q92859 1461 aa24.12■■□□□ 1.45
KATNA1-201ENST00000335643 CCDC18Q5T9S5 1454 aa24.11■■□□□ 1.45
KATNA1-201ENST00000335643 TROQ12816 1431 aaPredicted RBP24.11■■□□□ 1.45
KATNA1-201ENST00000335643 FRMPD1Q5SYB0 1578 aa24.08■■□□□ 1.45
KATNA1-201ENST00000335643 CDK11AQ9UQ88 783 aaPredicted RBP24.08■■□□□ 1.44
KATNA1-201ENST00000335643 FANCAO15360 1455 aa24.07■■□□□ 1.44
KATNA1-201ENST00000335643 MYO5CQ9NQX4 1742 aa24.06■■□□□ 1.44
KATNA1-201ENST00000335643 PHLDB1Q86UU1 1377 aa24.06■■□□□ 1.44
KATNA1-201ENST00000335643 RAPGEF3O95398 923 aa24.04■■□□□ 1.44
KATNA1-201ENST00000335643 PLCH2O75038 1416 aa24.04■■□□□ 1.44
KATNA1-201ENST00000335643 CFAP74Q9C0B2 1584 aa24.04■■□□□ 1.44
KATNA1-201ENST00000335643 AKNAQ7Z591 1439 aa24.03■■□□□ 1.44
KATNA1-201ENST00000335643 KDM4FA0A1W2PPD8 638 aa24.02■■□□□ 1.44
KATNA1-201ENST00000335643 RICTORQ6R327 1708 aa24.01■■□□□ 1.43
KATNA1-201ENST00000335643 CDC42BPBQ9Y5S2 1711 aa23.98■■□□□ 1.43
KATNA1-201ENST00000335643 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
KATNA1-201ENST00000335643 DENND4BO75064 1496 aaPredicted RBP23.95■■□□□ 1.42
KATNA1-201ENST00000335643 ADGRL1O94910 1474 aa23.95■■□□□ 1.42
KATNA1-201ENST00000335643 CDC42BPAQ5VT25 1732 aa23.94■■□□□ 1.42
KATNA1-201ENST00000335643 PREX2Q70Z35 1606 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms