RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 NISCHQ9Y2I1 1504 aa36.74■■■■□ 3.47
KATNA1-201ENST00000335643 CCDC180Q9P1Z9 1646 aa32.73■■■□□ 2.83
KATNA1-201ENST00000335643 ABCC9O60706 1549 aa32.23■■■□□ 2.75
KATNA1-201ENST00000335643 RB1CC1Q8TDY2 1594 aa30.86■■■□□ 2.53
KATNA1-201ENST00000335643 NACADO15069 1562 aa30.77■■■□□ 2.52
KATNA1-201ENST00000335643 DCAF8L2P0C7V8 631 aa30.72■■■□□ 2.51
KATNA1-201ENST00000335643 ZCCHC6Q5VYS8 1495 aaKnown RBP30.59■■■□□ 2.49
KATNA1-201ENST00000335643 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
KATNA1-201ENST00000335643 DCAF1Q9Y4B6 1507 aa30.36■■■□□ 2.45
KATNA1-201ENST00000335643 UNC13AQ9UPW8 1703 aa30.31■■■□□ 2.44
KATNA1-201ENST00000335643 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
KATNA1-201ENST00000335643 BICRAQ9NZM4 1560 aa30.04■■■□□ 2.4
KATNA1-201ENST00000335643 SCRIBQ14160 1630 aa29.92■■■□□ 2.38
KATNA1-201ENST00000335643 DNAJC5BQ9UF47 199 aa29.77■■■□□ 2.36
KATNA1-201ENST00000335643 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
KATNA1-201ENST00000335643 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
KATNA1-201ENST00000335643 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
KATNA1-201ENST00000335643 CECR2Q9BXF3 1484 aa28.94■■■□□ 2.22
KATNA1-201ENST00000335643 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
KATNA1-201ENST00000335643 BAZ1AQ9NRL2 1556 aaPredicted RBP28.47■■■□□ 2.15
KATNA1-201ENST00000335643 ATAD2BQ9ULI0 1458 aa28.44■■■□□ 2.14
KATNA1-201ENST00000335643 NCAPD3P42695 1498 aa28.41■■■□□ 2.14
KATNA1-201ENST00000335643 MROH2BQ7Z745 1585 aa28.37■■■□□ 2.13
KATNA1-201ENST00000335643 SMARCA2P51531 1590 aa28.34■■■□□ 2.13
KATNA1-201ENST00000335643 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
KATNA1-201ENST00000335643 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
KATNA1-201ENST00000335643 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
KATNA1-201ENST00000335643 WIZO95785 1651 aa28.07■■■□□ 2.08
KATNA1-201ENST00000335643 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
KATNA1-201ENST00000335643 NESP48681 1621 aa27.88■■■□□ 2.05
KATNA1-201ENST00000335643 ERCC6Q03468 1493 aa27.72■■■□□ 2.03
KATNA1-201ENST00000335643 TOP2AP11388 1531 aaKnown RBP27.7■■■□□ 2.03
KATNA1-201ENST00000335643 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
KATNA1-201ENST00000335643 CADPSQ9ULU8 1353 aa27.56■■■□□ 2
KATNA1-201ENST00000335643 KIF21AQ7Z4S6 1674 aa27.56■■■□□ 2
KATNA1-201ENST00000335643 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
KATNA1-201ENST00000335643 CUX2O14529 1486 aa27.47■■□□□ 1.99
KATNA1-201ENST00000335643 PDS5BQ9NTI5 1447 aa27.46■■□□□ 1.99
KATNA1-201ENST00000335643 CFTRP13569 1480 aa27.4■■□□□ 1.98
KATNA1-201ENST00000335643 CCDC88BA6NC98 1476 aa27.39■■□□□ 1.97
KATNA1-201ENST00000335643 FANCD2Q9BXW9 1451 aa27.28■■□□□ 1.96
KATNA1-201ENST00000335643 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
KATNA1-201ENST00000335643 CEP164Q9UPV0 1460 aa27.24■■□□□ 1.95
KATNA1-201ENST00000335643 PRDM2Q13029 1718 aa27.22■■□□□ 1.95
KATNA1-201ENST00000335643 WDR62O43379 1518 aa27.19■■□□□ 1.94
KATNA1-201ENST00000335643 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
KATNA1-201ENST00000335643 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
KATNA1-201ENST00000335643 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
KATNA1-201ENST00000335643 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
KATNA1-201ENST00000335643 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
KATNA1-201ENST00000335643 ABCC8Q09428 1581 aa26.72■■□□□ 1.87
KATNA1-201ENST00000335643 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
KATNA1-201ENST00000335643 ZNF608Q9ULD9 1512 aaPredicted RBP26.65■■□□□ 1.86
KATNA1-201ENST00000335643 CUX1P39880 1505 aa26.61■■□□□ 1.85
KATNA1-201ENST00000335643 POLA1P09884 1462 aaPredicted RBP26.61■■□□□ 1.85
KATNA1-201ENST00000335643 TARBP1Q13395 1621 aaKnown RBP26.6■■□□□ 1.85
KATNA1-201ENST00000335643 EIF4G3O43432 1585 aaKnown RBP26.53■■□□□ 1.84
KATNA1-201ENST00000335643 FGD5Q6ZNL6 1462 aa26.52■■□□□ 1.84
KATNA1-201ENST00000335643 RAD54L2Q9Y4B4 1467 aa26.52■■□□□ 1.84
KATNA1-201ENST00000335643 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.822e-6■■□□□ 12.2
KATNA1-201ENST00000335643 SOGA1O94964 1423 aa26.44■■□□□ 1.82
KATNA1-201ENST00000335643 WDR97A6NE52 1622 aa26.37■■□□□ 1.81
KATNA1-201ENST00000335643 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
KATNA1-201ENST00000335643 SYNJ1O43426 1573 aa26.35■■□□□ 1.81
KATNA1-201ENST00000335643 BIVM-ERCC5R4GMW8 1640 aa26.33■■□□□ 1.81
KATNA1-201ENST00000335643 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
KATNA1-201ENST00000335643 TOP2BQ02880 1626 aa26.31■■□□□ 1.8
KATNA1-201ENST00000335643 OSCARQ8IYS5 282 aa26.28■■□□□ 1.8
KATNA1-201ENST00000335643 CHD1O14646 1710 aa26.25■■□□□ 1.79
KATNA1-201ENST00000335643 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
KATNA1-201ENST00000335643 ABCA5Q8WWZ7 1642 aa26.19■■□□□ 1.78
KATNA1-201ENST00000335643 SNAPC4Q5SXM2 1469 aa26.19■■□□□ 1.78
KATNA1-201ENST00000335643 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
KATNA1-201ENST00000335643 GRIN2BQ13224 1484 aa26.15■■□□□ 1.78
KATNA1-201ENST00000335643 GAPVD1Q14C86 1478 aa26.15■■□□□ 1.78
KATNA1-201ENST00000335643 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
KATNA1-201ENST00000335643 FBLN2P98095 1184 aa26.09■■□□□ 1.77
KATNA1-201ENST00000335643 SYNJ2O15056 1496 aa26.02■■□□□ 1.76
KATNA1-201ENST00000335643 RIMBP3CA6NJZ7 1639 aa26■■□□□ 1.75
KATNA1-201ENST00000335643 RIMBP3BA6NNM3 1639 aa26■■□□□ 1.75
KATNA1-201ENST00000335643 RIMBP3Q9UFD9 1639 aa26■■□□□ 1.75
KATNA1-201ENST00000335643 CHMP7Q8WUX9 453 aaPredicted RBP25.97■■□□□ 1.75
KATNA1-201ENST00000335643 ARHGEF11O15085 1522 aa25.95■■□□□ 1.74
KATNA1-201ENST00000335643 ADAMTS12P58397 1594 aa25.94■■□□□ 1.74
KATNA1-201ENST00000335643 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
KATNA1-201ENST00000335643 TRIM41Q8WV44 630 aa25.9■■□□□ 1.74
KATNA1-201ENST00000335643 ERICH3Q5RHP9 1530 aa25.9■■□□□ 1.74
KATNA1-201ENST00000335643 GRIN2AQ12879 1464 aa25.86■■□□□ 1.73
KATNA1-201ENST00000335643 FHAD1B1AJZ9 1412 aa25.82■■□□□ 1.72
KATNA1-201ENST00000335643 CEP170Q5SW79 1584 aa25.79■■□□□ 1.72
KATNA1-201ENST00000335643 ARAP1Q96P48 1450 aa25.74■■□□□ 1.71
KATNA1-201ENST00000335643 NUP160Q12769 1436 aa25.74■■□□□ 1.71
KATNA1-201ENST00000335643 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
KATNA1-201ENST00000335643 IGF1RP08069 1367 aa25.7■■□□□ 1.71
KATNA1-201ENST00000335643 CYB5RLQ6IPT4 315 aa25.67■■□□□ 1.7
KATNA1-201ENST00000335643 CUL7Q14999 1698 aa25.64■■□□□ 1.7
KATNA1-201ENST00000335643 ERCC6L2Q5T890 1561 aa25.63■■□□□ 1.69
KATNA1-201ENST00000335643 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
KATNA1-201ENST00000335643 SHROOM2Q13796 1616 aa25.6■■□□□ 1.69
KATNA1-201ENST00000335643 CARMIL1Q5VZK9 1371 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms